RNA–Protein interactions for RNA: ENST00000395969.6

VPS41-203, Transcript of VPS41, HOPS complex subunit, humanhuman

TSL 5 BASIC

Gene VPS41, Length 3,181 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS41-203ENST00000395969 EPHA1P21709 976 aa4.58□□□□□ -1.68
VPS41-203ENST00000395969 PDLIM4P50479 330 aa4.58□□□□□ -1.68
VPS41-203ENST00000395969 FOXL2P58012 376 aa4.58□□□□□ -1.68
VPS41-203ENST00000395969 ERVFC1-1P60608 527 aa4.58□□□□□ -1.68
VPS41-203ENST00000395969 UBE2KP61086 200 aa4.58□□□□□ -1.68
VPS41-203ENST00000395969 RPS18P62269 152 aaKnown RBP4.58□□□□□ -1.68
VPS41-203ENST00000395969 P2RY6Q15077 328 aa4.58□□□□□ -1.68
VPS41-203ENST00000395969 SLC25A24Q6NUK1 477 aa4.58□□□□□ -1.68
VPS41-203ENST00000395969 DHRS13Q6UX07 377 aa4.58□□□□□ -1.68
VPS41-203ENST00000395969 Q6ZT83 130 aa4.58□□□□□ -1.68
VPS41-203ENST00000395969 APOBEC3DQ96AK3 386 aaPredicted RBP4.58□□□□□ -1.68
VPS41-203ENST00000395969 ZNF799Q96GE5 643 aa4.58□□□□□ -1.68
VPS41-203ENST00000395969 SCGB3A2Q96PL1 93 aa4.58□□□□□ -1.68
VPS41-203ENST00000395969 DIRC2Q96SL1 478 aa4.58□□□□□ -1.68
VPS41-203ENST00000395969 C1orf43Q9BWL3 253 aa4.58□□□□□ -1.68
VPS41-203ENST00000395969 OSGIN2Q9Y236 505 aa4.58□□□□□ -1.68
VPS41-203ENST00000395969 SELENOKQ9Y6D0 94 aa4.58□□□□□ -1.68
VPS41-203ENST00000395969 YLPM1P49750 1951 aaKnown RBP4.58□□□□□ -1.68
VPS41-203ENST00000395969 TRBV24-1A0A075B6N3 115 aa4.57□□□□□ -1.68
VPS41-203ENST00000395969 PIGBOS1A0A0B4J2F0 54 aa4.57□□□□□ -1.68
VPS41-203ENST00000395969 KIR2DL5BA0A0G2JN68 375 aa4.57□□□□□ -1.68
VPS41-203ENST00000395969 KIR2DL5BA0A0G2JPC4 375 aa4.57□□□□□ -1.68
VPS41-203ENST00000395969 DCDC2BA2VCK2 349 aa4.57□□□□□ -1.68
VPS41-203ENST00000395969 OR5B21A6NL26 309 aa4.57□□□□□ -1.68
VPS41-203ENST00000395969 E9PLN8 166 aa4.57□□□□□ -1.68
VPS41-203ENST00000395969 H0YL77 283 aa4.57□□□□□ -1.68
VPS41-203ENST00000395969 TNFSF12O43508 249 aa4.57□□□□□ -1.68
VPS41-203ENST00000395969 C1QL1O75973 258 aa4.57□□□□□ -1.68
VPS41-203ENST00000395969 TK1P04183 234 aa4.57□□□□□ -1.68
VPS41-203ENST00000395969 GNB3P16520 340 aa4.57□□□□□ -1.68
VPS41-203ENST00000395969 KLK2P20151 261 aa4.57□□□□□ -1.68
VPS41-203ENST00000395969 GDF1P27539 372 aa4.57□□□□□ -1.68
VPS41-203ENST00000395969 RPS27P42677 84 aaKnown RBP4.57□□□□□ -1.68
VPS41-203ENST00000395969 ERVK11-1P61568 191 aa4.57□□□□□ -1.68
VPS41-203ENST00000395969 RPS16P62249 146 aaKnown RBP4.57□□□□□ -1.68
VPS41-203ENST00000395969 IL24Q13007 206 aa4.57□□□□□ -1.68
VPS41-203ENST00000395969 MPV17LQ2QL34 196 aa4.57□□□□□ -1.68
VPS41-203ENST00000395969 PRAMEF20Q5VT98 475 aa4.57□□□□□ -1.68
VPS41-203ENST00000395969 SPSB3Q6PJ21 355 aa4.57□□□□□ -1.68
VPS41-203ENST00000395969 KIR2DL5AQ8N109 375 aa4.57□□□□□ -1.68
VPS41-203ENST00000395969 OR5A2Q8NGI9 324 aa4.57□□□□□ -1.68
VPS41-203ENST00000395969 NEK7Q8TDX7 302 aa4.57□□□□□ -1.68
VPS41-203ENST00000395969 TVP23CQ96ET8 276 aa4.57□□□□□ -1.68
VPS41-203ENST00000395969 C1orf159Q96HA4 380 aa4.57□□□□□ -1.68
VPS41-203ENST00000395969 FAM210BQ96KR6 192 aa4.57□□□□□ -1.68
VPS41-203ENST00000395969 HIPK2Q9H2X6 1198 aa4.57□□□□□ -1.68
VPS41-203ENST00000395969 KIAA2026Q5HYC2 2103 aa4.57□□□□□ -1.68
VPS41-203ENST00000395969 KNTC1P50748 2209 aa4.57□□□□□ -1.68
VPS41-203ENST00000395969 A0A0A6YYD4 124 aa4.57□□□□□ -1.68
VPS41-203ENST00000395969 BORCS7-ASMTA0A0B4J1R7 106 aa4.57□□□□□ -1.68
VPS41-203ENST00000395969 TRGV5A0A0B4J1U4 118 aa4.57□□□□□ -1.68
VPS41-203ENST00000395969 ZNF816-ZNF321PA0A0X1KG74 233 aa4.57□□□□□ -1.68
VPS41-203ENST00000395969 IQCF6A8MYZ5 107 aa4.57□□□□□ -1.68
VPS41-203ENST00000395969 RNF223E7ERA6 249 aa4.57□□□□□ -1.68
VPS41-203ENST00000395969 M0QZK8 103 aa4.57□□□□□ -1.68
VPS41-203ENST00000395969 RER1O15258 196 aa4.57□□□□□ -1.68
VPS41-203ENST00000395969 GGCTO75223 188 aaKnown RBP4.57□□□□□ -1.68
VPS41-203ENST00000395969 DFFBO76075 338 aa4.57□□□□□ -1.68
VPS41-203ENST00000395969 CYB5R3P00387 301 aaPredicted RBP4.57□□□□□ -1.68
VPS41-203ENST00000395969 PRH1P02810 166 aa4.57□□□□□ -1.68
VPS41-203ENST00000395969 HSPB1P04792 205 aaKnown RBP4.57□□□□□ -1.68
VPS41-203ENST00000395969 PGA5P0DJD9 388 aa4.57□□□□□ -1.68
VPS41-203ENST00000395969 HIST1H1DP16402 221 aaKnown RBP4.57□□□□□ -1.68
VPS41-203ENST00000395969 RND3P61587 244 aa4.57□□□□□ -1.68
VPS41-203ENST00000395969 TLE1Q04724 770 aa4.57□□□□□ -1.68
VPS41-203ENST00000395969 Q6ZVH6 145 aa4.57□□□□□ -1.68
VPS41-203ENST00000395969 SLC25A26Q70HW3 274 aa4.57□□□□□ -1.68
VPS41-203ENST00000395969 RTN4RL2Q86UN3 420 aa4.57□□□□□ -1.68
VPS41-203ENST00000395969 ZNF429Q86V71 674 aa4.57□□□□□ -1.68
VPS41-203ENST00000395969 ZNF573Q86YE8 665 aa4.57□□□□□ -1.68
VPS41-203ENST00000395969 HIST2H2ABQ8IUE6 130 aaPredicted RBP4.57□□□□□ -1.68
VPS41-203ENST00000395969 C1orf87Q8N0U7 546 aa4.57□□□□□ -1.68
VPS41-203ENST00000395969 OR13G1Q8NGZ3 307 aa4.57□□□□□ -1.68
VPS41-203ENST00000395969 SH3BGRL3Q9H299 93 aa4.57□□□□□ -1.68
VPS41-203ENST00000395969 GPR84Q9NQS5 396 aa4.57□□□□□ -1.68
VPS41-203ENST00000395969 C1orf123Q9NWV4 160 aa4.57□□□□□ -1.68
VPS41-203ENST00000395969 KIAA1456Q9P272 454 aa4.57□□□□□ -1.68
VPS41-203ENST00000395969 URB1O60287 2271 aaKnown RBP4.57□□□□□ -1.68
VPS41-203ENST00000395969 MYO15AQ9UKN7 3530 aa4.57□□□□□ -1.68
VPS41-203ENST00000395969 A0A096LPE4 126 aa4.57□□□□□ -1.68
VPS41-203ENST00000395969 A0A1W2PPZ6 126 aa4.57□□□□□ -1.68
VPS41-203ENST00000395969 SHISA8B8ZZ34 492 aa4.57□□□□□ -1.68
VPS41-203ENST00000395969 CXCL13O43927 109 aa4.57□□□□□ -1.68
VPS41-203ENST00000395969 WISP2O76076 250 aa4.57□□□□□ -1.68
VPS41-203ENST00000395969 CD33P20138 364 aa4.57□□□□□ -1.68
VPS41-203ENST00000395969 SERPINA2P20848 420 aa4.57□□□□□ -1.68
VPS41-203ENST00000395969 ZNF93P35789 620 aaPredicted RBP4.57□□□□□ -1.68
VPS41-203ENST00000395969 CCL20P78556 96 aa4.57□□□□□ -1.68
VPS41-203ENST00000395969 SPOCK1Q08629 439 aa4.57□□□□□ -1.68
VPS41-203ENST00000395969 ICAM4Q14773 271 aa4.57□□□□□ -1.68
VPS41-203ENST00000395969 KIF26BQ2KJY2 2108 aa4.57□□□□□ -1.68
VPS41-203ENST00000395969 IAH1Q2TAA2 248 aaPredicted RBP4.57□□□□□ -1.68
VPS41-203ENST00000395969 CEACAM21Q3KPI0 293 aa4.57□□□□□ -1.68
VPS41-203ENST00000395969 FBXL19-AS1Q494R0 122 aa4.57□□□□□ -1.68
VPS41-203ENST00000395969 ZNF506Q5JVG8 444 aa4.57□□□□□ -1.68
VPS41-203ENST00000395969 GPR157Q5UAW9 335 aa4.57□□□□□ -1.68
VPS41-203ENST00000395969 TMEM211Q6ICI0 200 aa4.57□□□□□ -1.68
VPS41-203ENST00000395969 SPINK14Q6IE38 97 aa4.57□□□□□ -1.68
VPS41-203ENST00000395969 OR10G4Q8NGN3 311 aa4.57□□□□□ -1.68
VPS41-203ENST00000395969 OR1P1Q8NH06 330 aa4.57□□□□□ -1.68
Retrieved 100 of 20,778 RNA–protein pairs in 85.6 ms