RNA–Protein interactions for RNA: ENST00000625244.2

SNX1-214, Transcript of sorting nexin 1, humanhuman

TSL 5 BASIC

Gene SNX1, Length 324 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX1-214ENST00000625244 EMG1Q92979 244 aaKnown RBP10.62□□□□□ -0.71
SNX1-214ENST00000625244 S1PR3Q99500 378 aa10.62□□□□□ -0.71
SNX1-214ENST00000625244 RASL11BQ9BPW5 248 aa10.62□□□□□ -0.71
SNX1-214ENST00000625244 JAM3Q9BX67 310 aa10.62□□□□□ -0.71
SNX1-214ENST00000625244 TOLLIPQ9H0E2 274 aa10.62□□□□□ -0.71
SNX1-214ENST00000625244 PLEKHA1Q9HB21 404 aa10.62□□□□□ -0.71
SNX1-214ENST00000625244 SEBOXQ9HB31 216 aaPredicted RBP10.62□□□□□ -0.71
SNX1-214ENST00000625244 GLS2Q9UI32 602 aa10.62□□□□□ -0.71
SNX1-214ENST00000625244 PSORS1C1Q9UIG5 152 aa10.62□□□□□ -0.71
SNX1-214ENST00000625244 WSB1Q9Y6I7 421 aa10.62□□□□□ -0.71
SNX1-214ENST00000625244 FAM230AA0A1W2PPH8 454 aa10.61□□□□□ -0.71
SNX1-214ENST00000625244 PTGES3LE9PB15 166 aa10.61□□□□□ -0.71
SNX1-214ENST00000625244 G3V318 75 aa10.61□□□□□ -0.71
SNX1-214ENST00000625244 DHRS3O75911 302 aa10.61□□□□□ -0.71
SNX1-214ENST00000625244 UBCP0CG48 685 aaKnown RBP10.61□□□□□ -0.71
SNX1-214ENST00000625244 OR5H8P0DN80 308 aa10.61□□□□□ -0.71
SNX1-214ENST00000625244 CALCBP10092 127 aa10.61□□□□□ -0.71
SNX1-214ENST00000625244 RAB9AP51151 201 aa10.61□□□□□ -0.71
SNX1-214ENST00000625244 MFGE8Q08431 387 aaPredicted RBP10.61□□□□□ -0.71
SNX1-214ENST00000625244 MOB3BQ86TA1 216 aa10.61□□□□□ -0.71
SNX1-214ENST00000625244 ANKRD13BQ86YJ7 626 aa10.61□□□□□ -0.71
SNX1-214ENST00000625244 ELMOD2Q8IZ81 293 aa10.61□□□□□ -0.71
SNX1-214ENST00000625244 CCDC54Q8NEL0 328 aa10.61□□□□□ -0.71
SNX1-214ENST00000625244 GGHQ92820 318 aa10.61□□□□□ -0.71
SNX1-214ENST00000625244 KIRREL1Q96J84 757 aa10.61□□□□□ -0.71
SNX1-214ENST00000625244 THAP7Q9BT49 309 aaPredicted RBP10.61□□□□□ -0.71
SNX1-214ENST00000625244 RSRP1Q9BUV0 290 aa10.61□□□□□ -0.71
SNX1-214ENST00000625244 ZNF580Q9UK33 172 aa10.61□□□□□ -0.71
SNX1-214ENST00000625244 STUB1Q9UNE7 303 aa10.61□□□□□ -0.71
SNX1-214ENST00000625244 ERGIC3Q9Y282 383 aa10.61□□□□□ -0.71
SNX1-214ENST00000625244 IGKV1-27A0A075B6S5 117 aa10.6□□□□□ -0.71
SNX1-214ENST00000625244 ODAMA1E959 279 aa10.6□□□□□ -0.71
SNX1-214ENST00000625244 SIRPB1O00241 398 aa10.6□□□□□ -0.71
SNX1-214ENST00000625244 SOX6P35712 828 aa10.6□□□□□ -0.71
SNX1-214ENST00000625244 REG1BP48304 166 aa10.6□□□□□ -0.71
SNX1-214ENST00000625244 SNU13P55769 128 aaKnown RBP10.6□□□□□ -0.71
SNX1-214ENST00000625244 RBM48Q5RL73 367 aaKnown RBP10.6□□□□□ -0.71
SNX1-214ENST00000625244 TMEM244Q5VVB8 128 aa10.6□□□□□ -0.71
SNX1-214ENST00000625244 IZUMO1Q8IYV9 350 aa10.6□□□□□ -0.71
SNX1-214ENST00000625244 OR2T10Q8NGZ9 312 aa10.6□□□□□ -0.71
SNX1-214ENST00000625244 RNF166Q96A37 237 aaPredicted RBP10.6□□□□□ -0.71
SNX1-214ENST00000625244 PELI1Q96FA3 418 aa10.6□□□□□ -0.71
SNX1-214ENST00000625244 COMMD4Q9H0A8 199 aa10.6□□□□□ -0.71
SNX1-214ENST00000625244 RBFOX1Q9NWB1 397 aaKnown RBP10.6□□□□□ -0.71
SNX1-214ENST00000625244 ING3Q9NXR8 418 aa10.6□□□□□ -0.71
SNX1-214ENST00000625244 PSG11Q9UQ72 335 aa10.6□□□□□ -0.71
SNX1-214ENST00000625244 IGHV1-3A0A0C4DH29 117 aa10.59□□□□□ -0.71
SNX1-214ENST00000625244 NUPR2A6NF83 97 aa10.59□□□□□ -0.71
SNX1-214ENST00000625244 ZNF729A6NN14 1252 aaPredicted RBP10.59□□□□□ -0.71
SNX1-214ENST00000625244 SYT7O43581 403 aa10.59□□□□□ -0.71
SNX1-214ENST00000625244 DENRO43583 198 aaKnown RBP10.59□□□□□ -0.71
SNX1-214ENST00000625244 SRSF10O75494 262 aaKnown RBP10.59□□□□□ -0.71
SNX1-214ENST00000625244 TTRP02766 147 aa10.59□□□□□ -0.71
SNX1-214ENST00000625244 CDK1P06493 297 aa10.59□□□□□ -0.71
SNX1-214ENST00000625244 LIMS3P0CW19 117 aa10.59□□□□□ -0.71
SNX1-214ENST00000625244 LIMS4P0CW20 117 aa10.59□□□□□ -0.71
SNX1-214ENST00000625244 NPBWR2P48146 333 aa10.59□□□□□ -0.71
SNX1-214ENST00000625244 GNG10P50151 68 aa10.59□□□□□ -0.71
SNX1-214ENST00000625244 ETV1P50549 477 aa10.59□□□□□ -0.71
SNX1-214ENST00000625244 F2RL1P55085 397 aa10.59□□□□□ -0.71
SNX1-214ENST00000625244 ZNF146Q15072 292 aa10.59□□□□□ -0.71
SNX1-214ENST00000625244 ODF4Q2M2E3 257 aa10.59□□□□□ -0.71
SNX1-214ENST00000625244 FDX2Q6P4F2 183 aa10.59□□□□□ -0.71
SNX1-214ENST00000625244 CEMP1Q6PRD7 247 aaPredicted RBP10.59□□□□□ -0.71
SNX1-214ENST00000625244 SLC25A26Q70HW3 274 aa10.59□□□□□ -0.71
SNX1-214ENST00000625244 OR2G2Q8NGZ5 317 aa10.59□□□□□ -0.71
SNX1-214ENST00000625244 OR52N1Q8NH53 320 aa10.59□□□□□ -0.71
SNX1-214ENST00000625244 CCDC90BQ9GZT6 254 aa10.59□□□□□ -0.71
SNX1-214ENST00000625244 ISG20L2Q9H9L3 353 aaKnown RBP10.59□□□□□ -0.71
SNX1-214ENST00000625244 TRBV2A0A0J9YWF9 115 aa10.58□□□□□ -0.72
SNX1-214ENST00000625244 KBTBD11-OT1A0A1B0GTJ5 212 aa10.58□□□□□ -0.72
SNX1-214ENST00000625244 FUOMA2VDF0 154 aa10.58□□□□□ -0.72
SNX1-214ENST00000625244 FAM90A10PA6NDY2 464 aa10.58□□□□□ -0.72
SNX1-214ENST00000625244 TMEM212A6NML5 194 aa10.58□□□□□ -0.72
SNX1-214ENST00000625244 HSD17B6O14756 317 aa10.58□□□□□ -0.72
SNX1-214ENST00000625244 RGS10O43665 173 aa10.58□□□□□ -0.72
SNX1-214ENST00000625244 CCR9P51686 369 aa10.58□□□□□ -0.72
SNX1-214ENST00000625244 TAS2R43P59537 309 aa10.58□□□□□ -0.72
SNX1-214ENST00000625244 ALKBH1Q13686 389 aaKnown RBP10.58□□□□□ -0.72
SNX1-214ENST00000625244 CCDC58Q4VC31 144 aa10.58□□□□□ -0.72
SNX1-214ENST00000625244 LAIR2Q6ISS4 152 aa10.58□□□□□ -0.72
SNX1-214ENST00000625244 OR5AK2Q8NH90 309 aa10.58□□□□□ -0.72
SNX1-214ENST00000625244 COQ2Q96H96 371 aa10.58□□□□□ -0.72
SNX1-214ENST00000625244 CHCHD6Q9BRQ6 235 aa10.58□□□□□ -0.72
SNX1-214ENST00000625244 ELOVL1Q9BW60 279 aa10.58□□□□□ -0.72
SNX1-214ENST00000625244 MND1Q9BWT6 205 aa10.58□□□□□ -0.72
SNX1-214ENST00000625244 ZNF107Q9UII5 783 aaPredicted RBP10.58□□□□□ -0.72
SNX1-214ENST00000625244 V9GYS6 101 aa10.58□□□□□ -0.72
SNX1-214ENST00000625244 LOC107986453A0A1B0GWG9 222 aa10.57□□□□□ -0.72
SNX1-214ENST00000625244 A0A1W2PPE3 182 aa10.57□□□□□ -0.72
SNX1-214ENST00000625244 DHRS7CA6NNS2 312 aa10.57□□□□□ -0.72
SNX1-214ENST00000625244 ZNF736B4DX44 427 aaPredicted RBP10.57□□□□□ -0.72
SNX1-214ENST00000625244 OR2H2O95918 312 aa10.57□□□□□ -0.72
SNX1-214ENST00000625244 SERPINA3P01011 423 aa10.57□□□□□ -0.72
SNX1-214ENST00000625244 LGALS1P09382 135 aaKnown RBP10.57□□□□□ -0.72
SNX1-214ENST00000625244 OCM2P0CE71 109 aa10.57□□□□□ -0.72
SNX1-214ENST00000625244 OCMP0CE72 109 aaPredicted RBP10.57□□□□□ -0.72
SNX1-214ENST00000625244 CGB3P0DN86 165 aa10.57□□□□□ -0.72
SNX1-214ENST00000625244 CGB7P0DN87 165 aa10.57□□□□□ -0.72
SNX1-214ENST00000625244 BCL3P20749 454 aa10.57□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 88.5 ms