RNA–Protein interactions for RNA: ENST00000601919.5

SSBP4-212, Transcript of single stranded DNA binding protein 4, humanhuman

TSL 5

Gene SSBP4, Length 492 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP4-212ENST00000601919 ZNF714Q96N38 554 aa15.36■□□□□ 0.05
SSBP4-212ENST00000601919 SLC6A7Q99884 636 aa15.36■□□□□ 0.05
SSBP4-212ENST00000601919 RPUSD1Q9UJJ7 312 aaKnown RBP15.36■□□□□ 0.05
SSBP4-212ENST00000601919 LOC105371242A0A075B767 164 aa15.35■□□□□ 0.05
SSBP4-212ENST00000601919 NPIPB11E5RHQ5 1161 aa15.35■□□□□ 0.05
SSBP4-212ENST00000601919 C15orf65H3BRN8 121 aa15.35■□□□□ 0.05
SSBP4-212ENST00000601919 BET1O15155 118 aa15.35■□□□□ 0.05
SSBP4-212ENST00000601919 FOXH1O75593 365 aa15.35■□□□□ 0.05
SSBP4-212ENST00000601919 ZNF735P0CB33 412 aa15.35■□□□□ 0.05
SSBP4-212ENST00000601919 ZNF728P0DKX0 622 aa15.35■□□□□ 0.05
SSBP4-212ENST00000601919 CGB3P0DN86 165 aa15.35■□□□□ 0.05
SSBP4-212ENST00000601919 CGB7P0DN87 165 aa15.35■□□□□ 0.05
SSBP4-212ENST00000601919 ZBTB25P24278 435 aa15.35■□□□□ 0.05
SSBP4-212ENST00000601919 LMO4P61968 165 aa15.35■□□□□ 0.05
SSBP4-212ENST00000601919 HTD2P86397 168 aa15.35■□□□□ 0.05
SSBP4-212ENST00000601919 TRIM16LQ309B1 348 aa15.35■□□□□ 0.05
SSBP4-212ENST00000601919 SCGB2B2Q4G0G5 96 aa15.35■□□□□ 0.05
SSBP4-212ENST00000601919 IGSF11Q5DX21 431 aa15.35■□□□□ 0.05
SSBP4-212ENST00000601919 Q5PR19 223 aa15.35■□□□□ 0.05
SSBP4-212ENST00000601919 OR10A7Q8NGE5 316 aa15.35■□□□□ 0.05
SSBP4-212ENST00000601919 OR1L1Q8NH94 360 aa15.35■□□□□ 0.05
SSBP4-212ENST00000601919 LINC00574Q9H8X3 128 aa15.35■□□□□ 0.05
SSBP4-212ENST00000601919 MALRD1Q5VYJ5 2156 aa15.34■□□□□ 0.05
SSBP4-212ENST00000601919 TRBV6-7A0A0A0MS04 114 aa15.34■□□□□ 0.05
SSBP4-212ENST00000601919 hCG_1809904A0A1W2PP81 198 aa15.34■□□□□ 0.05
SSBP4-212ENST00000601919 A0A1W2PPE2 198 aa15.34■□□□□ 0.05
SSBP4-212ENST00000601919 A0A1W2PR64 198 aa15.34■□□□□ 0.05
SSBP4-212ENST00000601919 A0A1W2PRV1 198 aa15.34■□□□□ 0.05
SSBP4-212ENST00000601919 A8MXK9 166 aa15.34■□□□□ 0.05
SSBP4-212ENST00000601919 USF1P22415 310 aaPredicted RBP15.34■□□□□ 0.05
SSBP4-212ENST00000601919 SSTR5P35346 364 aa15.34■□□□□ 0.05
SSBP4-212ENST00000601919 ECI1P42126 302 aa15.34■□□□□ 0.05
SSBP4-212ENST00000601919 RBMS2Q15434 407 aaKnown RBP15.34■□□□□ 0.05
SSBP4-212ENST00000601919 DHRS11Q6UWP2 260 aa15.34■□□□□ 0.05
SSBP4-212ENST00000601919 IDO2Q6ZQW0 420 aa15.34■□□□□ 0.05
SSBP4-212ENST00000601919 NRARPQ7Z6K4 114 aa15.34■□□□□ 0.05
SSBP4-212ENST00000601919 TERB2Q8NHR7 220 aa15.34■□□□□ 0.05
SSBP4-212ENST00000601919 GIMAP1Q8WWP7 306 aa15.34■□□□□ 0.05
SSBP4-212ENST00000601919 SCGB3A2Q96PL1 93 aa15.34■□□□□ 0.05
SSBP4-212ENST00000601919 SLC25A21Q9BQT8 299 aaPredicted RBP15.34■□□□□ 0.05
SSBP4-212ENST00000601919 SLC23A1Q9UHI7 598 aa15.34■□□□□ 0.05
SSBP4-212ENST00000601919 ABCA12Q86UK0 2595 aa15.34■□□□□ 0.05
SSBP4-212ENST00000601919 FBN2P35556 2912 aa15.33■□□□□ 0.05
SSBP4-212ENST00000601919 YLPM1P49750 1951 aaKnown RBP15.33■□□□□ 0.05
SSBP4-212ENST00000601919 PPIAL4CA0A0B4J2A2 164 aa15.33■□□□□ 0.04
SSBP4-212ENST00000601919 IGHV4-61A0A0C4DH41 118 aa15.33■□□□□ 0.04
SSBP4-212ENST00000601919 F2RL2O00254 374 aa15.33■□□□□ 0.04
SSBP4-212ENST00000601919 PHF1O43189 567 aaPredicted RBP15.33■□□□□ 0.04
SSBP4-212ENST00000601919 RGS11O94810 467 aa15.33■□□□□ 0.04
SSBP4-212ENST00000601919 LIPFP07098 398 aa15.33■□□□□ 0.04
SSBP4-212ENST00000601919 PPIAL4GP0DN37 164 aa15.33■□□□□ 0.04
SSBP4-212ENST00000601919 FPR2P25090 351 aa15.33■□□□□ 0.04
SSBP4-212ENST00000601919 FCGR2CP31995 323 aa15.33■□□□□ 0.04
SSBP4-212ENST00000601919 BTCP35070 178 aa15.33■□□□□ 0.04
SSBP4-212ENST00000601919 HERV-K104P61576 105 aa15.33■□□□□ 0.04
SSBP4-212ENST00000601919 ZNF273Q14593 569 aa15.33■□□□□ 0.04
SSBP4-212ENST00000601919 HERPUD1Q15011 391 aa15.33■□□□□ 0.04
SSBP4-212ENST00000601919 C17orf58Q2M2W7 97 aa15.33■□□□□ 0.04
SSBP4-212ENST00000601919 PLET1Q6UQ28 207 aa15.33■□□□□ 0.04
SSBP4-212ENST00000601919 TCF23Q7RTU1 214 aa15.33■□□□□ 0.04
SSBP4-212ENST00000601919 DUSP18Q8NEJ0 188 aa15.33■□□□□ 0.04
SSBP4-212ENST00000601919 RFESDQ8TAC1 157 aa15.33■□□□□ 0.04
SSBP4-212ENST00000601919 CHPT1Q8WUD6 406 aa15.33■□□□□ 0.04
SSBP4-212ENST00000601919 ZNF2Q9BSG1 426 aaPredicted RBP15.33■□□□□ 0.04
SSBP4-212ENST00000601919 OR2S2Q9NQN1 319 aa15.33■□□□□ 0.04
SSBP4-212ENST00000601919 IDI2-AS1Q9NZ38 188 aa15.33■□□□□ 0.04
SSBP4-212ENST00000601919 ZNF69Q9UC07 566 aa15.33■□□□□ 0.04
SSBP4-212ENST00000601919 JPT1Q9UK76 154 aa15.33■□□□□ 0.04
SSBP4-212ENST00000601919 TACC2O95359 2948 aa15.33■□□□□ 0.04
SSBP4-212ENST00000601919 IGKV1-6A0A0C4DH72 117 aa15.32■□□□□ 0.04
SSBP4-212ENST00000601919 ENSAO43768 121 aaKnown RBP15.32■□□□□ 0.04
SSBP4-212ENST00000601919 RBP4P02753 201 aa15.32■□□□□ 0.04
SSBP4-212ENST00000601919 CCR6P51684 374 aa15.32■□□□□ 0.04
SSBP4-212ENST00000601919 OXA1LQ15070 435 aa15.32■□□□□ 0.04
SSBP4-212ENST00000601919 PLA1AQ53H76 456 aa15.32■□□□□ 0.04
SSBP4-212ENST00000601919 HEPN1Q6WQI6 88 aa15.32■□□□□ 0.04
SSBP4-212ENST00000601919 LY6G5BQ8NDX9 201 aa15.32■□□□□ 0.04
SSBP4-212ENST00000601919 OR52M1Q8NGK5 317 aa15.32■□□□□ 0.04
SSBP4-212ENST00000601919 FAM216AQ8WUB2 273 aa15.32■□□□□ 0.04
SSBP4-212ENST00000601919 GNG12Q9UBI6 72 aa15.32■□□□□ 0.04
SSBP4-212ENST00000601919 NUBP2Q9Y5Y2 271 aa15.32■□□□□ 0.04
SSBP4-212ENST00000601919 NAV2Q8IVL1 2488 aa15.31■□□□□ 0.04
SSBP4-212ENST00000601919 MEX3AA1L020 520 aaKnown RBP15.31■□□□□ 0.04
SSBP4-212ENST00000601919 FAM172BPA6NC97 362 aa15.31■□□□□ 0.04
SSBP4-212ENST00000601919 NDUFB6O95139 128 aa15.31■□□□□ 0.04
SSBP4-212ENST00000601919 TCRBP04435 133 aa15.31■□□□□ 0.04
SSBP4-212ENST00000601919 NFYAP23511 347 aaPredicted RBP15.31■□□□□ 0.04
SSBP4-212ENST00000601919 CEACAM6P40199 344 aa15.31■□□□□ 0.04
SSBP4-212ENST00000601919 ZNF660Q6AZW8 331 aaPredicted RBP15.31■□□□□ 0.04
SSBP4-212ENST00000601919 H1FOOQ8IZA3 346 aaPredicted RBP15.31■□□□□ 0.04
SSBP4-212ENST00000601919 UBALD1Q8TB05 177 aa15.31■□□□□ 0.04
SSBP4-212ENST00000601919 FOXC2Q99958 501 aa15.31■□□□□ 0.04
SSBP4-212ENST00000601919 TOLLIPQ9H0E2 274 aa15.31■□□□□ 0.04
SSBP4-212ENST00000601919 OCEL1Q9H607 264 aa15.31■□□□□ 0.04
SSBP4-212ENST00000601919 APCP25054 2843 aa15.31■□□□□ 0.04
SSBP4-212ENST00000601919 KIAA1324LA8MWY0 1029 aaPredicted RBP15.3■□□□□ 0.04
SSBP4-212ENST00000601919 C22orf46C9J442 243 aa15.3■□□□□ 0.04
SSBP4-212ENST00000601919 TUSC2O75896 110 aa15.3■□□□□ 0.04
SSBP4-212ENST00000601919 PPYP01298 95 aa15.3■□□□□ 0.04
SSBP4-212ENST00000601919 CCL3L1P16619 93 aa15.3■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 35.4 ms