RNA–Protein interactions for RNA: ENST00000594298.5

SHKBP1-203, Transcript of SH3KBP1 binding protein 1, humanhuman

TSL 3

Gene SHKBP1, Length 716 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1-203ENST00000594298 F2RL2O00254 374 aa14.05□□□□□ -0.16
SHKBP1-203ENST00000594298 TOR1AO14656 332 aa14.05□□□□□ -0.16
SHKBP1-203ENST00000594298 VSIG8P0DPA2 414 aa14.05□□□□□ -0.16
SHKBP1-203ENST00000594298 VDAC2P45880 294 aaPredicted RBP14.05□□□□□ -0.16
SHKBP1-203ENST00000594298 PRRX1P54821 245 aa14.05□□□□□ -0.16
SHKBP1-203ENST00000594298 RPS27AP62979 156 aaKnown RBP14.05□□□□□ -0.16
SHKBP1-203ENST00000594298 CD83Q01151 205 aa14.05□□□□□ -0.16
SHKBP1-203ENST00000594298 SYT6Q5T7P8 510 aaPredicted RBP14.05□□□□□ -0.16
SHKBP1-203ENST00000594298 PRAMEF5Q5TYX0 476 aa14.05□□□□□ -0.16
SHKBP1-203ENST00000594298 FOXB2Q5VYV0 432 aa14.05□□□□□ -0.16
SHKBP1-203ENST00000594298 ABHD12Q8N2K0 398 aa14.05□□□□□ -0.16
SHKBP1-203ENST00000594298 OR13A1Q8NGR1 328 aa14.05□□□□□ -0.16
SHKBP1-203ENST00000594298 ZNF596Q8TC21 504 aa14.05□□□□□ -0.16
SHKBP1-203ENST00000594298 OCSTAMPQ9BR26 566 aa14.05□□□□□ -0.16
SHKBP1-203ENST00000594298 URM1Q9BTM9 101 aaKnown RBP14.05□□□□□ -0.16
SHKBP1-203ENST00000594298 ETAA1Q9NY74 926 aa14.05□□□□□ -0.16
SHKBP1-203ENST00000594298 CALYQ9NYX4 217 aa14.05□□□□□ -0.16
SHKBP1-203ENST00000594298 STUB1Q9UNE7 303 aa14.05□□□□□ -0.16
SHKBP1-203ENST00000594298 SSR3Q9UNL2 185 aa14.05□□□□□ -0.16
SHKBP1-203ENST00000594298 A0A087WXM4 84 aa14.04□□□□□ -0.16
SHKBP1-203ENST00000594298 PDCD6O75340 191 aa14.04□□□□□ -0.16
SHKBP1-203ENST00000594298 IL1AP01583 271 aa14.04□□□□□ -0.16
SHKBP1-203ENST00000594298 MT-ND4P03905 459 aa14.04□□□□□ -0.16
SHKBP1-203ENST00000594298 CGB3P0DN86 165 aa14.04□□□□□ -0.16
SHKBP1-203ENST00000594298 CGB7P0DN87 165 aa14.04□□□□□ -0.16
SHKBP1-203ENST00000594298 FGF9P31371 208 aaPredicted RBP14.04□□□□□ -0.16
SHKBP1-203ENST00000594298 C17orf58Q2M2W7 97 aa14.04□□□□□ -0.16
SHKBP1-203ENST00000594298 ZNF497Q6ZNH5 498 aa14.04□□□□□ -0.16
SHKBP1-203ENST00000594298 MRGPRDQ8TDS7 321 aa14.04□□□□□ -0.16
SHKBP1-203ENST00000594298 CREB3L1Q96BA8 519 aa14.04□□□□□ -0.16
SHKBP1-203ENST00000594298 LINC00574Q9H8X3 128 aa14.04□□□□□ -0.16
SHKBP1-203ENST00000594298 IDI2-AS1Q9NZ38 188 aa14.04□□□□□ -0.16
SHKBP1-203ENST00000594298 ZNF581Q9P0T4 197 aa14.04□□□□□ -0.16
SHKBP1-203ENST00000594298 HILPDAQ9Y5L2 63 aa14.04□□□□□ -0.16
SHKBP1-203ENST00000594298 TMEM14DPA8MWL7 114 aa14.03□□□□□ -0.16
SHKBP1-203ENST00000594298 AIPO00170 330 aa14.03□□□□□ -0.16
SHKBP1-203ENST00000594298 MMP23AO75900 390 aa14.03□□□□□ -0.16
SHKBP1-203ENST00000594298 RAB3BP20337 219 aa14.03□□□□□ -0.16
SHKBP1-203ENST00000594298 HTR1DP28221 377 aa14.03□□□□□ -0.16
SHKBP1-203ENST00000594298 CD34P28906 385 aa14.03□□□□□ -0.16
SHKBP1-203ENST00000594298 P2RY14Q15391 338 aa14.03□□□□□ -0.16
SHKBP1-203ENST00000594298 NEDD8Q15843 81 aa14.03□□□□□ -0.16
SHKBP1-203ENST00000594298 ARSJQ5FYB0 599 aaPredicted RBP14.03□□□□□ -0.16
SHKBP1-203ENST00000594298 C22orf42Q6IC83 251 aa14.03□□□□□ -0.16
SHKBP1-203ENST00000594298 OR10K2Q6IF99 312 aa14.03□□□□□ -0.16
SHKBP1-203ENST00000594298 TRAT1Q6PIZ9 186 aa14.03□□□□□ -0.16
SHKBP1-203ENST00000594298 SLC16A12Q6ZSM3 486 aa14.03□□□□□ -0.16
SHKBP1-203ENST00000594298 C16orf82Q7Z2V1 217 aa14.03□□□□□ -0.16
SHKBP1-203ENST00000594298 TSPAN14Q8NG11 270 aa14.03□□□□□ -0.16
SHKBP1-203ENST00000594298 OR5AU1Q8NGC0 362 aa14.03□□□□□ -0.16
SHKBP1-203ENST00000594298 NDNFQ8TB73 568 aa14.03□□□□□ -0.16
SHKBP1-203ENST00000594298 GFI1Q99684 422 aa14.03□□□□□ -0.16
SHKBP1-203ENST00000594298 TM2D1Q9BX74 207 aa14.03□□□□□ -0.16
SHKBP1-203ENST00000594298 STEAP1Q9UHE8 339 aa14.03□□□□□ -0.16
SHKBP1-203ENST00000594298 TRAPPC2LQ9UL33 140 aa14.03□□□□□ -0.16
SHKBP1-203ENST00000594298 A0A087X0M5 115 aa14.02□□□□□ -0.17
SHKBP1-203ENST00000594298 A0A1B0GX30 115 aa14.02□□□□□ -0.17
SHKBP1-203ENST00000594298 NPIPB11E5RHQ5 1161 aa14.02□□□□□ -0.17
SHKBP1-203ENST00000594298 ORC5O43913 435 aa14.02□□□□□ -0.17
SHKBP1-203ENST00000594298 JUNBP17275 347 aaPredicted RBP14.02□□□□□ -0.17
SHKBP1-203ENST00000594298 CD33P20138 364 aa14.02□□□□□ -0.17
SHKBP1-203ENST00000594298 NFYBP25208 207 aa14.02□□□□□ -0.17
SHKBP1-203ENST00000594298 QRFPP83859 136 aa14.02□□□□□ -0.17
SHKBP1-203ENST00000594298 TMEM95Q3KNT9 176 aa14.02□□□□□ -0.17
SHKBP1-203ENST00000594298 NKAPLQ5M9Q1 402 aa14.02□□□□□ -0.17
SHKBP1-203ENST00000594298 C6orf183Q5T699 404 aa14.02□□□□□ -0.17
SHKBP1-203ENST00000594298 CCDC107Q8WV48 283 aa14.02□□□□□ -0.17
SHKBP1-203ENST00000594298 ARL11Q969Q4 196 aa14.02□□□□□ -0.17
SHKBP1-203ENST00000594298 FAM3DQ96BQ1 224 aa14.02□□□□□ -0.17
SHKBP1-203ENST00000594298 KIRREL1Q96J84 757 aa14.02□□□□□ -0.17
SHKBP1-203ENST00000594298 TXNL4BQ9NX01 149 aaKnown RBP14.02□□□□□ -0.17
SHKBP1-203ENST00000594298 DPM3Q9P2X0 92 aa14.02□□□□□ -0.17
SHKBP1-203ENST00000594298 DNAH3Q8TD57 4116 aa14.02□□□□□ -0.17
SHKBP1-203ENST00000594298 UBE2QL1A1L167 161 aa14.01□□□□□ -0.17
SHKBP1-203ENST00000594298 LEUTXA8MZ59 168 aa14.01□□□□□ -0.17
SHKBP1-203ENST00000594298 IGLL1P15814 213 aa14.01□□□□□ -0.17
SHKBP1-203ENST00000594298 CEACAM3P40198 252 aa14.01□□□□□ -0.17
SHKBP1-203ENST00000594298 ARHGDIBP52566 201 aa14.01□□□□□ -0.17
SHKBP1-203ENST00000594298 UNC119Q13432 240 aa14.01□□□□□ -0.17
SHKBP1-203ENST00000594298 C2orf76Q3KRA6 126 aa14.01□□□□□ -0.17
SHKBP1-203ENST00000594298 SIGIRRQ6IA17 410 aa14.01□□□□□ -0.17
SHKBP1-203ENST00000594298 TPRA1Q86W33 373 aa14.01□□□□□ -0.17
SHKBP1-203ENST00000594298 OR51D1Q8NGF3 324 aa14.01□□□□□ -0.17
SHKBP1-203ENST00000594298 OR9G1Q8NH87 305 aa14.01□□□□□ -0.17
SHKBP1-203ENST00000594298 RFESDQ8TAC1 157 aa14.01□□□□□ -0.17
SHKBP1-203ENST00000594298 PLEKHJ1Q9NW61 149 aa14.01□□□□□ -0.17
SHKBP1-203ENST00000594298 KCNIP1Q9NZI2 227 aa14.01□□□□□ -0.17
SHKBP1-203ENST00000594298 IFITM5A6NNB3 132 aa14□□□□□ -0.17
SHKBP1-203ENST00000594298 SPINT2O43291 252 aa14□□□□□ -0.17
SHKBP1-203ENST00000594298 CD36P16671 472 aa14□□□□□ -0.17
SHKBP1-203ENST00000594298 CHATP28329 748 aa14□□□□□ -0.17
SHKBP1-203ENST00000594298 BLVRBP30043 206 aaPredicted RBP14□□□□□ -0.17
SHKBP1-203ENST00000594298 GDNFP39905 211 aa14□□□□□ -0.17
SHKBP1-203ENST00000594298 TMEM30BQ3MIR4 351 aa14□□□□□ -0.17
SHKBP1-203ENST00000594298 TIMM50Q3ZCQ8 353 aa14□□□□□ -0.17
SHKBP1-203ENST00000594298 TCTEX1D4Q5JR98 221 aa14□□□□□ -0.17
SHKBP1-203ENST00000594298 HES5Q5TA89 166 aa14□□□□□ -0.17
SHKBP1-203ENST00000594298 GAPTQ8N292 157 aa14□□□□□ -0.17
SHKBP1-203ENST00000594298 OR52M1Q8NGK5 317 aa14□□□□□ -0.17
SHKBP1-203ENST00000594298 OR4P4Q8NGL7 312 aa14□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 82.7 ms