RNA–Protein interactions for RNA: ENST00000560998.5

RABGGTA-220, Transcript of Rab geranylgeranyltransferase subunit alpha, humanhuman

TSL 5

Gene RABGGTA, Length 1,997 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RABGGTA-220ENST00000560998 VAMP2P63027 116 aa12□□□□□ -0.49
RABGGTA-220ENST00000560998 P2RY6Q15077 328 aa12□□□□□ -0.49
RABGGTA-220ENST00000560998 ZNF880Q6PDB4 577 aa12□□□□□ -0.49
RABGGTA-220ENST00000560998 GGNQ86UU5 652 aa12□□□□□ -0.49
RABGGTA-220ENST00000560998 IMMP2LQ96T52 175 aa12□□□□□ -0.49
RABGGTA-220ENST00000560998 ULBP2Q9BZM5 246 aa12□□□□□ -0.49
RABGGTA-220ENST00000560998 SPRY4Q9C004 299 aa12□□□□□ -0.49
RABGGTA-220ENST00000560998 NAT8Q9UHE5 227 aa12□□□□□ -0.49
RABGGTA-220ENST00000560998 A0A1W2PP11 408 aa11.99□□□□□ -0.49
RABGGTA-220ENST00000560998 FAM24AA6NFZ4 105 aa11.99□□□□□ -0.49
RABGGTA-220ENST00000560998 M0R296 226 aa11.99□□□□□ -0.49
RABGGTA-220ENST00000560998 SCGB1D1O95968 90 aa11.99□□□□□ -0.49
RABGGTA-220ENST00000560998 IFNA1P01562 189 aa11.99□□□□□ -0.49
RABGGTA-220ENST00000560998 TYMSP04818 313 aa11.99□□□□□ -0.49
RABGGTA-220ENST00000560998 RFPL3SP0C7P2 107 aa11.99□□□□□ -0.49
RABGGTA-220ENST00000560998 TMEM225BP0DP42 221 aa11.99□□□□□ -0.49
RABGGTA-220ENST00000560998 RPL29P47914 159 aaKnown RBP11.99□□□□□ -0.49
RABGGTA-220ENST00000560998 UCP3P55916 312 aa11.99□□□□□ -0.49
RABGGTA-220ENST00000560998 TAS2R30P59541 319 aa11.99□□□□□ -0.49
RABGGTA-220ENST00000560998 RSPO1Q2MKA7 263 aaPredicted RBP11.99□□□□□ -0.49
RABGGTA-220ENST00000560998 NEK7Q8TDX7 302 aa11.99□□□□□ -0.49
RABGGTA-220ENST00000560998 MIEN1Q9BRT3 115 aa11.99□□□□□ -0.49
RABGGTA-220ENST00000560998 GNG13Q9P2W3 67 aa11.99□□□□□ -0.49
RABGGTA-220ENST00000560998 RNF150Q9ULK6 438 aa11.99□□□□□ -0.49
RABGGTA-220ENST00000560998 LAMP3Q9UQV4 416 aa11.99□□□□□ -0.49
RABGGTA-220ENST00000560998 IGKV1-9A0A0C4DH69 117 aa11.99□□□□□ -0.49
RABGGTA-220ENST00000560998 A0A0U1RQV5 110 aa11.99□□□□□ -0.49
RABGGTA-220ENST00000560998 F5H5K5 113 aa11.99□□□□□ -0.49
RABGGTA-220ENST00000560998 ITGB1BP1O14713 200 aa11.99□□□□□ -0.49
RABGGTA-220ENST00000560998 IL6RP08887 468 aaPredicted RBP11.99□□□□□ -0.49
RABGGTA-220ENST00000560998 DTYMKP23919 212 aa11.99□□□□□ -0.49
RABGGTA-220ENST00000560998 OTX1P32242 354 aaPredicted RBP11.99□□□□□ -0.49
RABGGTA-220ENST00000560998 BRS3P32247 399 aa11.99□□□□□ -0.49
RABGGTA-220ENST00000560998 IDH3GP51553 393 aaPredicted RBP11.99□□□□□ -0.49
RABGGTA-220ENST00000560998 CARD18P57730 90 aa11.99□□□□□ -0.49
RABGGTA-220ENST00000560998 MRPS34P82930 218 aaKnown RBP11.99□□□□□ -0.49
RABGGTA-220ENST00000560998 SP6Q3SY56 376 aa11.99□□□□□ -0.49
RABGGTA-220ENST00000560998 FBXW9Q5XUX1 488 aa11.99□□□□□ -0.49
RABGGTA-220ENST00000560998 CYP2G1PQ6ZSU1 146 aa11.99□□□□□ -0.49
RABGGTA-220ENST00000560998 CISD2Q8N5K1 135 aaKnown RBP11.99□□□□□ -0.49
RABGGTA-220ENST00000560998 TMEM252Q8N6L7 170 aa11.99□□□□□ -0.49
RABGGTA-220ENST00000560998 TMEM171Q8WVE6 324 aa11.99□□□□□ -0.49
RABGGTA-220ENST00000560998 ZNF837Q96EG3 531 aaPredicted RBP11.99□□□□□ -0.49
RABGGTA-220ENST00000560998 BTF3L4Q96K17 158 aa11.99□□□□□ -0.49
RABGGTA-220ENST00000560998 ATP5SQ99766 215 aa11.99□□□□□ -0.49
RABGGTA-220ENST00000560998 FAAP24Q9BTP7 215 aa11.99□□□□□ -0.49
RABGGTA-220ENST00000560998 PARD6AQ9NPB6 346 aa11.99□□□□□ -0.49
RABGGTA-220ENST00000560998 DEPPQ9NTK1 212 aa11.99□□□□□ -0.49
RABGGTA-220ENST00000560998 C9orf172C9J069 976 aa11.98□□□□□ -0.49
RABGGTA-220ENST00000560998 HRASP01112 189 aa11.98□□□□□ -0.49
RABGGTA-220ENST00000560998 JMJD7P0C870 316 aa11.98□□□□□ -0.49
RABGGTA-220ENST00000560998 NKX2-1P43699 371 aaPredicted RBP11.98□□□□□ -0.49
RABGGTA-220ENST00000560998 TNFSF10P50591 281 aa11.98□□□□□ -0.49
RABGGTA-220ENST00000560998 FAM27BQ5VT28 67 aa11.98□□□□□ -0.49
RABGGTA-220ENST00000560998 NCR3LG1Q68D85 454 aa11.98□□□□□ -0.49
RABGGTA-220ENST00000560998 ZNF705AQ6ZN79 300 aaPredicted RBP11.98□□□□□ -0.49
RABGGTA-220ENST00000560998 OR51G1Q8NGK1 321 aa11.98□□□□□ -0.49
RABGGTA-220ENST00000560998 OR5C1Q8NGR4 320 aa11.98□□□□□ -0.49
RABGGTA-220ENST00000560998 PSMF1Q92530 271 aa11.98□□□□□ -0.49
RABGGTA-220ENST00000560998 LIN37Q96GY3 246 aaPredicted RBP11.98□□□□□ -0.49
RABGGTA-220ENST00000560998 ZNF845Q96IR2 970 aaPredicted RBP11.98□□□□□ -0.49
RABGGTA-220ENST00000560998 SLC2A9Q9NRM0 540 aa11.98□□□□□ -0.49
RABGGTA-220ENST00000560998 ZFP30Q9Y2G7 519 aa11.98□□□□□ -0.49
RABGGTA-220ENST00000560998 DOCK10Q96BY6 2186 aa11.98□□□□□ -0.49
RABGGTA-220ENST00000560998 IGKV1D-8A0A087WSZ0 117 aa11.98□□□□□ -0.49
RABGGTA-220ENST00000560998 ZNF716A6NP11 495 aa11.98□□□□□ -0.49
RABGGTA-220ENST00000560998 HPRT1P00492 218 aa11.98□□□□□ -0.49
RABGGTA-220ENST00000560998 MMP7P09237 267 aaPredicted RBP11.98□□□□□ -0.49
RABGGTA-220ENST00000560998 CD82P27701 267 aa11.98□□□□□ -0.49
RABGGTA-220ENST00000560998 NTF4P34130 210 aa11.98□□□□□ -0.49
RABGGTA-220ENST00000560998 GALR1P47211 349 aa11.98□□□□□ -0.49
RABGGTA-220ENST00000560998 CYB561P49447 251 aa11.98□□□□□ -0.49
RABGGTA-220ENST00000560998 IL24Q13007 206 aa11.98□□□□□ -0.49
RABGGTA-220ENST00000560998 DMRTA1Q5VZB9 504 aa11.98□□□□□ -0.49
RABGGTA-220ENST00000560998 Q6ZSR3 168 aa11.98□□□□□ -0.49
RABGGTA-220ENST00000560998 C16orf82Q7Z2V1 217 aa11.98□□□□□ -0.49
RABGGTA-220ENST00000560998 P4HA3Q7Z4N8 544 aa11.98□□□□□ -0.49
RABGGTA-220ENST00000560998 DTX1Q86Y01 620 aa11.98□□□□□ -0.49
RABGGTA-220ENST00000560998 ZNF100Q8IYN0 542 aa11.98□□□□□ -0.49
RABGGTA-220ENST00000560998 MBD3L1Q8WWY6 194 aa11.98□□□□□ -0.49
RABGGTA-220ENST00000560998 RIMS4Q9H426 269 aaPredicted RBP11.98□□□□□ -0.49
RABGGTA-220ENST00000560998 MCTS1Q9ULC4 181 aaKnown RBP11.98□□□□□ -0.49
RABGGTA-220ENST00000560998 CNTRLQ7Z7A1 2325 aa11.97□□□□□ -0.49
RABGGTA-220ENST00000560998 YLPM1P49750 1951 aaKnown RBP11.97□□□□□ -0.49
RABGGTA-220ENST00000560998 PINLYPA6NC86 204 aa11.97□□□□□ -0.49
RABGGTA-220ENST00000560998 A6NNC1 897 aa11.97□□□□□ -0.49
RABGGTA-220ENST00000560998 H7BYZ3 331 aa11.97□□□□□ -0.49
RABGGTA-220ENST00000560998 CXCL13O43927 109 aa11.97□□□□□ -0.49
RABGGTA-220ENST00000560998 DHRS3O75911 302 aa11.97□□□□□ -0.49
RABGGTA-220ENST00000560998 MDKP21741 143 aaPredicted RBP11.97□□□□□ -0.49
RABGGTA-220ENST00000560998 SRP14P37108 136 aaKnown RBP11.97□□□□□ -0.49
RABGGTA-220ENST00000560998 WIPI1Q5MNZ9 446 aaPredicted RBP11.97□□□□□ -0.49
RABGGTA-220ENST00000560998 COL5A1-AS1Q5SY13 56 aa11.97□□□□□ -0.49
RABGGTA-220ENST00000560998 ZNF787Q6DD87 383 aa11.97□□□□□ -0.49
RABGGTA-220ENST00000560998 ALKBH2Q6NS38 261 aa11.97□□□□□ -0.49
RABGGTA-220ENST00000560998 MRGPRGQ86SM5 289 aa11.97□□□□□ -0.49
RABGGTA-220ENST00000560998 OR2V1Q8NHB1 315 aa11.97□□□□□ -0.49
RABGGTA-220ENST00000560998 TOMM40LQ969M1 308 aa11.97□□□□□ -0.49
RABGGTA-220ENST00000560998 ANAPC16Q96DE5 110 aa11.97□□□□□ -0.49
RABGGTA-220ENST00000560998 THOC3Q96J01 351 aaKnown RBP11.97□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 65.9 ms