RNA–Protein interactions for RNA: ENST00000553128.5

VPS29-211, Transcript of VPS29, retromer complex component, humanhuman

TSL 3

Gene VPS29, Length 449 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS29-211ENST00000553128 TP53I3Q53FA7 332 aa9.82□□□□□ -0.84
VPS29-211ENST00000553128 CT45A1Q5HYN5 189 aa9.82□□□□□ -0.84
VPS29-211ENST00000553128 NXNL2Q5VZ03 156 aa9.82□□□□□ -0.84
VPS29-211ENST00000553128 DHFR2Q86XF0 187 aa9.82□□□□□ -0.84
VPS29-211ENST00000553128 TCEANCQ8N8B7 351 aa9.82□□□□□ -0.84
VPS29-211ENST00000553128 OR52M1Q8NGK5 317 aa9.82□□□□□ -0.84
VPS29-211ENST00000553128 OR10K1Q8NGX5 313 aa9.82□□□□□ -0.84
VPS29-211ENST00000553128 CT45A3Q8NHU0 189 aa9.82□□□□□ -0.84
VPS29-211ENST00000553128 CCDC107Q8WV48 283 aa9.82□□□□□ -0.84
VPS29-211ENST00000553128 FLYWCH2Q96CP2 140 aaKnown RBP9.82□□□□□ -0.84
VPS29-211ENST00000553128 ELAC2Q9BQ52 826 aaKnown RBP9.82□□□□□ -0.84
VPS29-211ENST00000553128 TEX12Q9BXU0 123 aa9.82□□□□□ -0.84
VPS29-211ENST00000553128 FAM118AQ9NWS6 357 aa9.82□□□□□ -0.84
VPS29-211ENST00000553128 FOXA2Q9Y261 457 aaPredicted RBP9.82□□□□□ -0.84
VPS29-211ENST00000553128 SULT1C4O75897 302 aa9.81□□□□□ -0.84
VPS29-211ENST00000553128 EPHA2P29317 976 aa9.81□□□□□ -0.84
VPS29-211ENST00000553128 PMS2P11Q13670 270 aa9.81□□□□□ -0.84
VPS29-211ENST00000553128 KISS1Q15726 138 aa9.81□□□□□ -0.84
VPS29-211ENST00000553128 C5orf64Q2M2E5 130 aa9.81□□□□□ -0.84
VPS29-211ENST00000553128 SPATS1Q496A3 300 aa9.81□□□□□ -0.84
VPS29-211ENST00000553128 ELP2Q6IA86 826 aa9.81□□□□□ -0.84
VPS29-211ENST00000553128 GTSCR1Q86UQ5 136 aa9.81□□□□□ -0.84
VPS29-211ENST00000553128 ADGRG5Q8IZF4 528 aa9.81□□□□□ -0.84
VPS29-211ENST00000553128 SUMF2Q8NBJ7 301 aa9.81□□□□□ -0.84
VPS29-211ENST00000553128 OR10H4Q8NGA5 316 aa9.81□□□□□ -0.84
VPS29-211ENST00000553128 OR10V1Q8NGI7 309 aa9.81□□□□□ -0.84
VPS29-211ENST00000553128 OR2G2Q8NGZ5 317 aa9.81□□□□□ -0.84
VPS29-211ENST00000553128 TMEM163Q8TC26 289 aa9.81□□□□□ -0.84
VPS29-211ENST00000553128 RHOVQ96L33 236 aa9.81□□□□□ -0.84
VPS29-211ENST00000553128 IL4I1Q96RQ9 567 aa9.81□□□□□ -0.84
VPS29-211ENST00000553128 DPCDQ9BVM2 203 aaPredicted RBP9.81□□□□□ -0.84
VPS29-211ENST00000553128 WFDC10AQ9H1F0 79 aa9.81□□□□□ -0.84
VPS29-211ENST00000553128 FRRS1LQ9P0K9 344 aa9.81□□□□□ -0.84
VPS29-211ENST00000553128 H2AFY2Q9P0M6 372 aaPredicted RBP9.81□□□□□ -0.84
VPS29-211ENST00000553128 GNG8Q9UK08 70 aa9.81□□□□□ -0.84
VPS29-211ENST00000553128 ADAM30Q9UKF2 790 aa9.81□□□□□ -0.84
VPS29-211ENST00000553128 GNGT2O14610 69 aa9.8□□□□□ -0.84
VPS29-211ENST00000553128 NBR2O15453 112 aa9.8□□□□□ -0.84
VPS29-211ENST00000553128 TXNL1O43396 289 aa9.8□□□□□ -0.84
VPS29-211ENST00000553128 ANXA8P13928 327 aa9.8□□□□□ -0.84
VPS29-211ENST00000553128 GZMHP20718 246 aa9.8□□□□□ -0.84
VPS29-211ENST00000553128 EWSR1Q01844 656 aaKnown RBP eCLIP9.8□□□□□ -0.84
VPS29-211ENST00000553128 ZNF85Q03923 595 aa9.8□□□□□ -0.84
VPS29-211ENST00000553128 RAB40BQ12829 278 aa9.8□□□□□ -0.84
VPS29-211ENST00000553128 IL13RA2Q14627 380 aa9.8□□□□□ -0.84
VPS29-211ENST00000553128 TMEM244Q5VVB8 128 aa9.8□□□□□ -0.84
VPS29-211ENST00000553128 LPCAT4Q643R3 524 aa9.8□□□□□ -0.84
VPS29-211ENST00000553128 LIN54Q6MZP7 749 aa9.8□□□□□ -0.84
VPS29-211ENST00000553128 FAM53CQ9NYF3 392 aa9.8□□□□□ -0.84
VPS29-211ENST00000553128 TAGLN3Q9UI15 199 aa9.8□□□□□ -0.84
VPS29-211ENST00000553128 SHISA3A0PJX4 238 aa9.79□□□□□ -0.84
VPS29-211ENST00000553128 H0Y980 276 aa9.79□□□□□ -0.84
VPS29-211ENST00000553128 FCN1O00602 326 aa9.79□□□□□ -0.84
VPS29-211ENST00000553128 ISG15P05161 165 aa9.79□□□□□ -0.84
VPS29-211ENST00000553128 OR2T7P0C7T2 308 aa9.79□□□□□ -0.84
VPS29-211ENST00000553128 DBTP11182 482 aaKnown RBP9.79□□□□□ -0.84
VPS29-211ENST00000553128 KCNJ3P48549 501 aa9.79□□□□□ -0.84
VPS29-211ENST00000553128 CRIP2P52943 208 aaPredicted RBP9.79□□□□□ -0.84
VPS29-211ENST00000553128 TPPP2P59282 170 aa9.79□□□□□ -0.84
VPS29-211ENST00000553128 TRIM25Q14258 630 aaKnown RBP9.79□□□□□ -0.84
VPS29-211ENST00000553128 ZNF691Q5VV52 312 aa9.79□□□□□ -0.84
VPS29-211ENST00000553128 DEFB125Q8N687 156 aa9.79□□□□□ -0.84
VPS29-211ENST00000553128 OR13C3Q8NGS6 347 aa9.79□□□□□ -0.84
VPS29-211ENST00000553128 ZNF251Q9BRH9 671 aa9.79□□□□□ -0.84
VPS29-211ENST00000553128 FAM103A1Q9BTL3 118 aaKnown RBP9.79□□□□□ -0.84
VPS29-211ENST00000553128 MRPL20Q9BYC9 149 aaKnown RBP9.79□□□□□ -0.84
VPS29-211ENST00000553128 GAB2Q9UQC2 676 aa9.79□□□□□ -0.84
VPS29-211ENST00000553128 NUBP2Q9Y5Y2 271 aa9.79□□□□□ -0.84
VPS29-211ENST00000553128 TMEM30CPA0ZSE6 113 aa9.78□□□□□ -0.84
VPS29-211ENST00000553128 ANKRD34BA5PLL1 514 aa9.78□□□□□ -0.84
VPS29-211ENST00000553128 CXorf65A6NEN9 183 aa9.78□□□□□ -0.84
VPS29-211ENST00000553128 MITFO75030 526 aaPredicted RBP9.78□□□□□ -0.84
VPS29-211ENST00000553128 NDUFA3O95167 84 aa9.78□□□□□ -0.84
VPS29-211ENST00000553128 DAPP51397 102 aa9.78□□□□□ -0.84
VPS29-211ENST00000553128 SYNJ2BPP57105 145 aa9.78□□□□□ -0.84
VPS29-211ENST00000553128 CX3CL1P78423 397 aa9.78□□□□□ -0.84
VPS29-211ENST00000553128 KLF5Q13887 457 aaPredicted RBP9.78□□□□□ -0.84
VPS29-211ENST00000553128 FAHD1Q6P587 224 aa9.78□□□□□ -0.84
VPS29-211ENST00000553128 C5orf24Q7Z6I8 188 aa9.78□□□□□ -0.84
VPS29-211ENST00000553128 NPBQ8NG41 125 aa9.78□□□□□ -0.84
VPS29-211ENST00000553128 OR9G4Q8NGQ1 327 aa9.78□□□□□ -0.84
VPS29-211ENST00000553128 CANT1Q8WVQ1 401 aa9.78□□□□□ -0.84
VPS29-211ENST00000553128 FBXL15Q9H469 300 aa9.78□□□□□ -0.84
VPS29-211ENST00000553128 CNOT2Q9NZN8 540 aaKnown RBP9.78□□□□□ -0.84
VPS29-211ENST00000553128 DNAH17Q9UFH2 4485 aa9.78□□□□□ -0.84
VPS29-211ENST00000553128 GABRPO00591 440 aa9.77□□□□□ -0.85
VPS29-211ENST00000553128 LANCL1O43813 399 aa9.77□□□□□ -0.85
VPS29-211ENST00000553128 ORC5O43913 435 aa9.77□□□□□ -0.85
VPS29-211ENST00000553128 MT-ND4P03905 459 aa9.77□□□□□ -0.85
VPS29-211ENST00000553128 CSN3P07498 182 aa9.77□□□□□ -0.85
VPS29-211ENST00000553128 CD7P09564 240 aa9.77□□□□□ -0.85
VPS29-211ENST00000553128 CD81P60033 236 aa9.77□□□□□ -0.85
VPS29-211ENST00000553128 Q3ZCU0 254 aa9.77□□□□□ -0.85
VPS29-211ENST00000553128 C12orf73Q69YU5 71 aa9.77□□□□□ -0.85
VPS29-211ENST00000553128 GID4Q8IVV7 300 aa9.77□□□□□ -0.85
VPS29-211ENST00000553128 ODF3L1Q8IXM7 274 aa9.77□□□□□ -0.85
VPS29-211ENST00000553128 PRR18Q8N4B5 295 aa9.77□□□□□ -0.85
VPS29-211ENST00000553128 PXT1Q8NFP0 134 aa9.77□□□□□ -0.85
VPS29-211ENST00000553128 OR1L1Q8NH94 360 aa9.77□□□□□ -0.85
VPS29-211ENST00000553128 TNFAIP8L1Q8WVP5 186 aa9.77□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 123.3 ms