RNA–Protein interactions for RNA: ENST00000490099.5

TMEM39A-210, Transcript of transmembrane protein 39A, humanhuman

TSL 3

Gene TMEM39A, Length 868 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM39A-210ENST00000490099 NANOGP1Q8N7R0 232 aa7.72□□□□□ -1.17
TMEM39A-210ENST00000490099 RFESDQ8TAC1 157 aa7.72□□□□□ -1.17
TMEM39A-210ENST00000490099 MRGPRDQ8TDS7 321 aa7.72□□□□□ -1.17
TMEM39A-210ENST00000490099 LEAP2Q969E1 77 aa7.72□□□□□ -1.17
TMEM39A-210ENST00000490099 DERL3Q96Q80 235 aa7.72□□□□□ -1.17
TMEM39A-210ENST00000490099 ING3Q9NXR8 418 aa7.72□□□□□ -1.17
TMEM39A-210ENST00000490099 ING4Q9UNL4 249 aa7.72□□□□□ -1.17
TMEM39A-210ENST00000490099 AMMECR1Q9Y4X0 333 aaPredicted RBP7.72□□□□□ -1.17
TMEM39A-210ENST00000490099 TRAV39A0A0B4J263 110 aa7.71□□□□□ -1.18
TMEM39A-210ENST00000490099 TMEM30CPA0ZSE6 113 aa7.71□□□□□ -1.18
TMEM39A-210ENST00000490099 FGF16O43320 207 aa7.71□□□□□ -1.18
TMEM39A-210ENST00000490099 CA11O75493 328 aa7.71□□□□□ -1.18
TMEM39A-210ENST00000490099 SC5DO75845 299 aa7.71□□□□□ -1.18
TMEM39A-210ENST00000490099 CSTBP04080 98 aaKnown RBP7.71□□□□□ -1.18
TMEM39A-210ENST00000490099 SMIM18P0DKX4 95 aa7.71□□□□□ -1.18
TMEM39A-210ENST00000490099 ZNF137PP52743 207 aa7.71□□□□□ -1.18
TMEM39A-210ENST00000490099 GP2P55259 537 aaKnown RBP7.71□□□□□ -1.18
TMEM39A-210ENST00000490099 IRF3Q14653 427 aa7.71□□□□□ -1.18
TMEM39A-210ENST00000490099 NSUN5P1Q3KNT7 163 aa7.71□□□□□ -1.18
TMEM39A-210ENST00000490099 SLC22A6Q4U2R8 563 aa7.71□□□□□ -1.18
TMEM39A-210ENST00000490099 STEAP3Q658P3 488 aa7.71□□□□□ -1.18
TMEM39A-210ENST00000490099 SIGIRRQ6IA17 410 aa7.71□□□□□ -1.18
TMEM39A-210ENST00000490099 REC114Q7Z4M0 266 aa7.71□□□□□ -1.18
TMEM39A-210ENST00000490099 CENPVQ7Z7K6 275 aaPredicted RBP7.71□□□□□ -1.18
TMEM39A-210ENST00000490099 DRAM1Q8N682 238 aa7.71□□□□□ -1.18
TMEM39A-210ENST00000490099 Q8N6K4 173 aa7.71□□□□□ -1.18
TMEM39A-210ENST00000490099 C5orf56Q8N8D9 126 aa7.71□□□□□ -1.18
TMEM39A-210ENST00000490099 ZFP41Q8N8Y5 198 aa7.71□□□□□ -1.18
TMEM39A-210ENST00000490099 TMEM104Q8NE00 496 aa7.71□□□□□ -1.18
TMEM39A-210ENST00000490099 TOMM40LQ969M1 308 aa7.71□□□□□ -1.18
TMEM39A-210ENST00000490099 RPEQ96AT9 228 aa7.71□□□□□ -1.18
TMEM39A-210ENST00000490099 R3HDM4Q96D70 268 aa7.71□□□□□ -1.18
TMEM39A-210ENST00000490099 OR14A2Q96R54 314 aa7.71□□□□□ -1.18
TMEM39A-210ENST00000490099 FAM192AQ9GZU8 254 aa7.71□□□□□ -1.18
TMEM39A-210ENST00000490099 SPACA1Q9HBV2 294 aa7.71□□□□□ -1.18
TMEM39A-210ENST00000490099 ACOT13Q9NPJ3 140 aa7.71□□□□□ -1.18
TMEM39A-210ENST00000490099 CKLFQ9UBR5 152 aa7.71□□□□□ -1.18
TMEM39A-210ENST00000490099 FAM90A10PA6NDY2 464 aa7.7□□□□□ -1.18
TMEM39A-210ENST00000490099 FAM90A7PA6NKC0 464 aa7.7□□□□□ -1.18
TMEM39A-210ENST00000490099 FAM90A23PA8MXZ1 464 aa7.7□□□□□ -1.18
TMEM39A-210ENST00000490099 CCRL2O00421 344 aa7.7□□□□□ -1.18
TMEM39A-210ENST00000490099 PEX14O75381 377 aa7.7□□□□□ -1.18
TMEM39A-210ENST00000490099 IGHV3-7P01780 117 aa7.7□□□□□ -1.18
TMEM39A-210ENST00000490099 SNRNP70P08621 437 aaKnown RBP7.7□□□□□ -1.18
TMEM39A-210ENST00000490099 CELP19835 753 aa7.7□□□□□ -1.18
TMEM39A-210ENST00000490099 SERPINA2P20848 420 aa7.7□□□□□ -1.18
TMEM39A-210ENST00000490099 RPL5P46777 297 aaKnown RBP7.7□□□□□ -1.18
TMEM39A-210ENST00000490099 SPHARQ15513 63 aa7.7□□□□□ -1.18
TMEM39A-210ENST00000490099 MED22Q15528 200 aa7.7□□□□□ -1.18
TMEM39A-210ENST00000490099 NEDD8Q15843 81 aa7.7□□□□□ -1.18
TMEM39A-210ENST00000490099 TMEM30BQ3MIR4 351 aa7.7□□□□□ -1.18
TMEM39A-210ENST00000490099 UBE2UQ5VVX9 321 aa7.7□□□□□ -1.18
TMEM39A-210ENST00000490099 C10orf99Q6UWK7 81 aa7.7□□□□□ -1.18
TMEM39A-210ENST00000490099 Q6ZPA2 131 aa7.7□□□□□ -1.18
TMEM39A-210ENST00000490099 ZNF554Q86TJ5 538 aa7.7□□□□□ -1.18
TMEM39A-210ENST00000490099 ZNF439Q8NDP4 499 aa7.7□□□□□ -1.18
TMEM39A-210ENST00000490099 OR56B4Q8NH76 319 aa7.7□□□□□ -1.18
TMEM39A-210ENST00000490099 CAPSLQ8WWF8 208 aa7.7□□□□□ -1.18
TMEM39A-210ENST00000490099 SGCDQ92629 289 aa7.7□□□□□ -1.18
TMEM39A-210ENST00000490099 THRSPQ92748 146 aa7.7□□□□□ -1.18
TMEM39A-210ENST00000490099 ARL11Q969Q4 196 aa7.7□□□□□ -1.18
TMEM39A-210ENST00000490099 MUL1Q969V5 352 aa7.7□□□□□ -1.18
TMEM39A-210ENST00000490099 UQCC2Q9BRT2 126 aa7.7□□□□□ -1.18
TMEM39A-210ENST00000490099 ISYNA1Q9NPH2 558 aa7.7□□□□□ -1.18
TMEM39A-210ENST00000490099 PLSCR3Q9NRY6 295 aa7.7□□□□□ -1.18
TMEM39A-210ENST00000490099 MBNL3Q9NUK0 354 aaKnown RBP7.7□□□□□ -1.18
TMEM39A-210ENST00000490099 GFOD1Q9NXC2 390 aa7.7□□□□□ -1.18
TMEM39A-210ENST00000490099 GHRLQ9UBU3 117 aa7.7□□□□□ -1.18
TMEM39A-210ENST00000490099 MRPS28Q9Y2Q9 187 aaKnown RBP7.7□□□□□ -1.18
TMEM39A-210ENST00000490099 MOB4Q9Y3A3 225 aa7.7□□□□□ -1.18
TMEM39A-210ENST00000490099 TSSC4Q9Y5U2 329 aaPredicted RBP7.7□□□□□ -1.18
TMEM39A-210ENST00000490099 IGHV1-3A0A0C4DH29 117 aa7.69□□□□□ -1.18
TMEM39A-210ENST00000490099 A0A1W2PPK0 400 aa7.69□□□□□ -1.18
TMEM39A-210ENST00000490099 SH2D7A6NKC9 451 aaPredicted RBP7.69□□□□□ -1.18
TMEM39A-210ENST00000490099 C12orf77C9JDV5 145 aa7.69□□□□□ -1.18
TMEM39A-210ENST00000490099 IGHG2P01859 326 aa7.69□□□□□ -1.18
TMEM39A-210ENST00000490099 GAPDHP04406 335 aaKnown RBP7.69□□□□□ -1.18
TMEM39A-210ENST00000490099 PSMB9P28065 219 aa7.69□□□□□ -1.18
TMEM39A-210ENST00000490099 MAP2K4P45985 399 aa7.69□□□□□ -1.18
TMEM39A-210ENST00000490099 ZNF134P52741 427 aa7.69□□□□□ -1.18
TMEM39A-210ENST00000490099 MLLT11Q13015 90 aaPredicted RBP7.69□□□□□ -1.18
TMEM39A-210ENST00000490099 GPR50Q13585 617 aa7.69□□□□□ -1.18
TMEM39A-210ENST00000490099 RBM39Q14498 530 aaKnown RBP7.69□□□□□ -1.18
TMEM39A-210ENST00000490099 LY6G6FQ5SQ64 297 aa7.69□□□□□ -1.18
TMEM39A-210ENST00000490099 FAM53AQ6NSI3 398 aaPredicted RBP7.69□□□□□ -1.18
TMEM39A-210ENST00000490099 GLIPR1L1Q6UWM5 242 aa7.69□□□□□ -1.18
TMEM39A-210ENST00000490099 SLC25A48Q6ZT89 311 aaKnown RBP7.69□□□□□ -1.18
TMEM39A-210ENST00000490099 IZUMO1Q8IYV9 350 aa7.69□□□□□ -1.18
TMEM39A-210ENST00000490099 MS4A15Q8N5U1 240 aa7.69□□□□□ -1.18
TMEM39A-210ENST00000490099 NKAIN3Q8N8D7 197 aa7.69□□□□□ -1.18
TMEM39A-210ENST00000490099 OR10X1Q8NGY0 326 aa7.69□□□□□ -1.18
TMEM39A-210ENST00000490099 EAF1Q96JC9 268 aaPredicted RBP7.69□□□□□ -1.18
TMEM39A-210ENST00000490099 Q96M66 194 aa7.69□□□□□ -1.18
TMEM39A-210ENST00000490099 S100A13Q99584 98 aa7.69□□□□□ -1.18
TMEM39A-210ENST00000490099 NECAP2Q9NVZ3 263 aa7.69□□□□□ -1.18
TMEM39A-210ENST00000490099 LSM2Q9Y333 95 aaKnown RBP7.69□□□□□ -1.18
TMEM39A-210ENST00000490099 A0A1W2PPE3 182 aa7.68□□□□□ -1.18
TMEM39A-210ENST00000490099 TCRBV4S1A1TA0A5B7 111 aa7.68□□□□□ -1.18
TMEM39A-210ENST00000490099 MCRIP1C9JLW8 97 aa7.68□□□□□ -1.18
TMEM39A-210ENST00000490099 SDCBPO00560 298 aaPredicted RBP7.68□□□□□ -1.18
Retrieved 100 of 20,778 RNA–protein pairs in 71.8 ms