RNA–Protein interactions for RNA: ENST00000474323.5

SAMM50-203, Transcript of SAMM50 sorting and assembly machinery component, humanhuman

TSL 2

Gene SAMM50, Length 2,368 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SAMM50-203ENST00000474323 Q6ZSR3 168 aa12.51□□□□□ -0.41
SAMM50-203ENST00000474323 TMEM105Q8N8V8 129 aa12.51□□□□□ -0.41
SAMM50-203ENST00000474323 IFI44Q8TCB0 444 aa12.51□□□□□ -0.41
SAMM50-203ENST00000474323 SAP25Q8TEE9 199 aa12.51□□□□□ -0.41
SAMM50-203ENST00000474323 C20orf144Q9BQM9 153 aa12.51□□□□□ -0.41
SAMM50-203ENST00000474323 MIEN1Q9BRT3 115 aa12.51□□□□□ -0.41
SAMM50-203ENST00000474323 WWTR1Q9GZV5 400 aa12.51□□□□□ -0.41
SAMM50-203ENST00000474323 TNFSF12-TNFSF13A0A0A6YY99 330 aa12.5□□□□□ -0.41
SAMM50-203ENST00000474323 A0A1W2PPQ1 181 aa12.5□□□□□ -0.41
SAMM50-203ENST00000474323 MAP1LC3B2A6NCE7 125 aa12.5□□□□□ -0.41
SAMM50-203ENST00000474323 PPYP01298 95 aa12.5□□□□□ -0.41
SAMM50-203ENST00000474323 VDAC1P21796 283 aa12.5□□□□□ -0.41
SAMM50-203ENST00000474323 ZNF41P51814 821 aaPredicted RBP12.5□□□□□ -0.41
SAMM50-203ENST00000474323 RPL23P62829 140 aaKnown RBP12.5□□□□□ -0.41
SAMM50-203ENST00000474323 ZNF726P1Q15940 193 aa12.5□□□□□ -0.41
SAMM50-203ENST00000474323 LPAL2Q16609 132 aa12.5□□□□□ -0.41
SAMM50-203ENST00000474323 NMSQ5H8A3 153 aa12.5□□□□□ -0.41
SAMM50-203ENST00000474323 CDCP2Q5VXM1 449 aa12.5□□□□□ -0.41
SAMM50-203ENST00000474323 GUSBP11Q6P575 273 aa12.5□□□□□ -0.41
SAMM50-203ENST00000474323 UEVLDQ8IX04 471 aa12.5□□□□□ -0.41
SAMM50-203ENST00000474323 OR2T10Q8NGZ9 312 aa12.5□□□□□ -0.41
SAMM50-203ENST00000474323 PSMG3Q9BT73 122 aaPredicted RBP12.5□□□□□ -0.41
SAMM50-203ENST00000474323 MAP1LC3BQ9GZQ8 125 aa12.5□□□□□ -0.41
SAMM50-203ENST00000474323 PIGLQ9Y2B2 252 aa12.5□□□□□ -0.41
SAMM50-203ENST00000474323 IGKV3D-11A0A0A0MRZ8 115 aa12.5□□□□□ -0.41
SAMM50-203ENST00000474323 LNP1A1A4G5 178 aa12.5□□□□□ -0.41
SAMM50-203ENST00000474323 C5orf63A6NC05 138 aa12.5□□□□□ -0.41
SAMM50-203ENST00000474323 ANKUB1A6NFN9 424 aa12.5□□□□□ -0.41
SAMM50-203ENST00000474323 EDN3P14138 238 aa12.5□□□□□ -0.41
SAMM50-203ENST00000474323 SRP14P37108 136 aaKnown RBP12.5□□□□□ -0.41
SAMM50-203ENST00000474323 PAX9P55771 341 aa12.5□□□□□ -0.41
SAMM50-203ENST00000474323 MRPS34P82930 218 aaKnown RBP12.5□□□□□ -0.41
SAMM50-203ENST00000474323 OR1L3Q8NH93 324 aa12.5□□□□□ -0.41
SAMM50-203ENST00000474323 POC1BQ8TC44 478 aa12.5□□□□□ -0.41
SAMM50-203ENST00000474323 SCGB1C1Q8TD33 95 aa12.5□□□□□ -0.41
SAMM50-203ENST00000474323 ZDHHC19Q8WVZ1 309 aaPredicted RBP12.5□□□□□ -0.41
SAMM50-203ENST00000474323 DIRC2Q96SL1 478 aa12.5□□□□□ -0.41
SAMM50-203ENST00000474323 CHRNA10Q9GZZ6 450 aa12.5□□□□□ -0.41
SAMM50-203ENST00000474323 OR51I2Q9H344 312 aa12.5□□□□□ -0.41
SAMM50-203ENST00000474323 RBKSQ9H477 322 aa12.5□□□□□ -0.41
SAMM50-203ENST00000474323 RNF115Q9Y4L5 304 aa12.5□□□□□ -0.41
SAMM50-203ENST00000474323 SHANK1Q9Y566 2161 aa12.5□□□□□ -0.41
SAMM50-203ENST00000474323 HLA-HP01893 362 aa12.49□□□□□ -0.41
SAMM50-203ENST00000474323 FGF8P55075 233 aaPredicted RBP12.49□□□□□ -0.41
SAMM50-203ENST00000474323 SERF2P84101 59 aa12.49□□□□□ -0.41
SAMM50-203ENST00000474323 ZNF92Q03936 586 aa12.49□□□□□ -0.41
SAMM50-203ENST00000474323 OR8B8Q15620 311 aa12.49□□□□□ -0.41
SAMM50-203ENST00000474323 TBC1D26Q86UD7 250 aa12.49□□□□□ -0.41
SAMM50-203ENST00000474323 PLPPR1Q8TBJ4 325 aa12.49□□□□□ -0.41
SAMM50-203ENST00000474323 MS4A10Q96PG2 267 aa12.49□□□□□ -0.41
SAMM50-203ENST00000474323 DUSP23Q9BVJ7 150 aa12.49□□□□□ -0.41
SAMM50-203ENST00000474323 ZNF160Q9HCG1 818 aa12.49□□□□□ -0.41
SAMM50-203ENST00000474323 GPR179Q6PRD1 2367 aa12.49□□□□□ -0.41
SAMM50-203ENST00000474323 H3BMH7 237 aa12.49□□□□□ -0.41
SAMM50-203ENST00000474323 ZNF737O75373 536 aa12.49□□□□□ -0.41
SAMM50-203ENST00000474323 GNRHRP30968 328 aa12.49□□□□□ -0.41
SAMM50-203ENST00000474323 TBX15Q96SF7 602 aa12.49□□□□□ -0.41
SAMM50-203ENST00000474323 FER1L5A0AVI2 2057 aa12.48□□□□□ -0.41
SAMM50-203ENST00000474323 LY6G6EA0A0G2JKS1 128 aa12.48□□□□□ -0.41
SAMM50-203ENST00000474323 VSTM2BA6NLU5 285 aa12.48□□□□□ -0.41
SAMM50-203ENST00000474323 ZNF705FA8MVS1 300 aaPredicted RBP12.48□□□□□ -0.41
SAMM50-203ENST00000474323 TMEM250H0YL14 139 aa12.48□□□□□ -0.41
SAMM50-203ENST00000474323 M0R296 226 aa12.48□□□□□ -0.41
SAMM50-203ENST00000474323 TNFSF13O75888 250 aa12.48□□□□□ -0.41
SAMM50-203ENST00000474323 ZNF705DP0CH99 300 aaPredicted RBP12.48□□□□□ -0.41
SAMM50-203ENST00000474323 ZNF705BP0CI00 300 aaPredicted RBP12.48□□□□□ -0.41
SAMM50-203ENST00000474323 GNG10P50151 68 aa12.48□□□□□ -0.41
SAMM50-203ENST00000474323 RANP62826 216 aaKnown RBP12.48□□□□□ -0.41
SAMM50-203ENST00000474323 LCN2P80188 198 aa12.48□□□□□ -0.41
SAMM50-203ENST00000474323 WDR74Q6RFH5 385 aaPredicted RBP12.48□□□□□ -0.41
SAMM50-203ENST00000474323 ZCCHC14Q8WYQ9 949 aaKnown RBP12.48□□□□□ -0.41
SAMM50-203ENST00000474323 SPSB1Q96BD6 273 aa12.48□□□□□ -0.41
SAMM50-203ENST00000474323 RSG1Q9BU20 258 aa12.48□□□□□ -0.41
SAMM50-203ENST00000474323 TMUB1Q9BVT8 246 aa12.48□□□□□ -0.41
SAMM50-203ENST00000474323 U3KQA8 63 aa12.48□□□□□ -0.41
SAMM50-203ENST00000474323 IL6RP08887 468 aaPredicted RBP12.48□□□□□ -0.41
SAMM50-203ENST00000474323 MDH2P40926 338 aaKnown RBP12.48□□□□□ -0.41
SAMM50-203ENST00000474323 MEF2BQ02080 365 aaPredicted RBP12.48□□□□□ -0.41
SAMM50-203ENST00000474323 ELOVL1Q9BW60 279 aa12.48□□□□□ -0.41
SAMM50-203ENST00000474323 VSIRQ9H7M9 311 aa12.48□□□□□ -0.41
SAMM50-203ENST00000474323 FGF21Q9NSA1 209 aa12.48□□□□□ -0.41
SAMM50-203ENST00000474323 ZNF581Q9P0T4 197 aa12.48□□□□□ -0.41
SAMM50-203ENST00000474323 COPS7AQ9UBW8 275 aa12.48□□□□□ -0.41
SAMM50-203ENST00000474323 ANGPTL7O43827 346 aa12.47□□□□□ -0.41
SAMM50-203ENST00000474323 LCATP04180 440 aa12.47□□□□□ -0.41
SAMM50-203ENST00000474323 UCP1P25874 307 aa12.47□□□□□ -0.41
SAMM50-203ENST00000474323 CD82P27701 267 aa12.47□□□□□ -0.41
SAMM50-203ENST00000474323 TRIM61Q5EBN2 209 aa12.47□□□□□ -0.41
SAMM50-203ENST00000474323 TMEM211Q6ICI0 200 aa12.47□□□□□ -0.41
SAMM50-203ENST00000474323 KCNIP4Q6PIL6 250 aa12.47□□□□□ -0.41
SAMM50-203ENST00000474323 SSX7Q7RTT5 188 aa12.47□□□□□ -0.41
SAMM50-203ENST00000474323 ZNF441Q8N8Z8 693 aa12.47□□□□□ -0.41
SAMM50-203ENST00000474323 DYRK2Q92630 601 aa12.47□□□□□ -0.41
SAMM50-203ENST00000474323 PINX1Q96BK5 328 aaKnown RBP12.47□□□□□ -0.41
SAMM50-203ENST00000474323 BTF3L4Q96K17 158 aa12.47□□□□□ -0.41
SAMM50-203ENST00000474323 PLSCR4Q9NRQ2 329 aa12.47□□□□□ -0.41
SAMM50-203ENST00000474323 CFAP54Q96N23 3096 aa12.47□□□□□ -0.41
SAMM50-203ENST00000474323 LRRC3CA6NJW4 275 aa12.47□□□□□ -0.41
SAMM50-203ENST00000474323 F5H5K5 113 aa12.47□□□□□ -0.41
SAMM50-203ENST00000474323 H3BML4 177 aa12.47□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 245 ms