RNA–Protein interactions for RNA: ENST00000462258.1

SF3A3-204, Transcript of splicing factor 3a subunit 3, humanhuman

TSL 2

Gene SF3A3, Length 527 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3A3-204ENST00000462258 AMY2AP04746 511 aa8.11□□□□□ -1.11
SF3A3-204ENST00000462258 LPLP06858 475 aa8.11□□□□□ -1.11
SF3A3-204ENST00000462258 UBBP0CG47 229 aa8.11□□□□□ -1.11
SF3A3-204ENST00000462258 OPN1MW2P0DN77 364 aa8.11□□□□□ -1.11
SF3A3-204ENST00000462258 OPN1MW3P0DN78 364 aa8.11□□□□□ -1.11
SF3A3-204ENST00000462258 TMEM11P17152 192 aa8.11□□□□□ -1.11
SF3A3-204ENST00000462258 IL3RAP26951 378 aa8.11□□□□□ -1.11
SF3A3-204ENST00000462258 VHLP40337 213 aa8.11□□□□□ -1.11
SF3A3-204ENST00000462258 GP2P55259 537 aaKnown RBP8.11□□□□□ -1.11
SF3A3-204ENST00000462258 ZNF816Q0VGE8 651 aaPredicted RBP8.11□□□□□ -1.11
SF3A3-204ENST00000462258 HES1Q14469 280 aa8.11□□□□□ -1.11
SF3A3-204ENST00000462258 TMEM30BQ3MIR4 351 aa8.11□□□□□ -1.11
SF3A3-204ENST00000462258 NKAPLQ5M9Q1 402 aa8.11□□□□□ -1.11
SF3A3-204ENST00000462258 SYT6Q5T7P8 510 aaPredicted RBP8.11□□□□□ -1.11
SF3A3-204ENST00000462258 LIPKQ5VXJ0 399 aa8.11□□□□□ -1.11
SF3A3-204ENST00000462258 GLT8D1Q68CQ7 371 aa8.11□□□□□ -1.11
SF3A3-204ENST00000462258 TRAT1Q6PIZ9 186 aa8.11□□□□□ -1.11
SF3A3-204ENST00000462258 UNQ9370/PRO34162Q6UXP9 181 aa8.11□□□□□ -1.11
SF3A3-204ENST00000462258 IZUMO2Q6UXV1 221 aa8.11□□□□□ -1.11
SF3A3-204ENST00000462258 LRRTM1Q86UE6 522 aa8.11□□□□□ -1.11
SF3A3-204ENST00000462258 C1QL4Q86Z23 238 aa8.11□□□□□ -1.11
SF3A3-204ENST00000462258 GAPTQ8N292 157 aa8.11□□□□□ -1.11
SF3A3-204ENST00000462258 PRR18Q8N4B5 295 aa8.11□□□□□ -1.11
SF3A3-204ENST00000462258 OR52M1Q8NGK5 317 aa8.11□□□□□ -1.11
SF3A3-204ENST00000462258 OR4K15Q8NH41 348 aa8.11□□□□□ -1.11
SF3A3-204ENST00000462258 RAB9BQ9NP90 201 aa8.11□□□□□ -1.11
SF3A3-204ENST00000462258 TRAPPC2LQ9UL33 140 aa8.11□□□□□ -1.11
SF3A3-204ENST00000462258 CCRL2O00421 344 aa8.1□□□□□ -1.11
SF3A3-204ENST00000462258 SPINT2O43291 252 aa8.1□□□□□ -1.11
SF3A3-204ENST00000462258 PDCD6O75340 191 aa8.1□□□□□ -1.11
SF3A3-204ENST00000462258 CA11O75493 328 aa8.1□□□□□ -1.11
SF3A3-204ENST00000462258 IGKV1D-33P01593 117 aa8.1□□□□□ -1.11
SF3A3-204ENST00000462258 IGKV1-33P01594 117 aa8.1□□□□□ -1.11
SF3A3-204ENST00000462258 UCHL1P09936 223 aa8.1□□□□□ -1.11
SF3A3-204ENST00000462258 HSMCR30P0CW71 290 aa8.1□□□□□ -1.11
SF3A3-204ENST00000462258 VSIG8P0DPA2 414 aa8.1□□□□□ -1.11
SF3A3-204ENST00000462258 FUT3P21217 361 aa8.1□□□□□ -1.11
SF3A3-204ENST00000462258 REG1BP48304 166 aa8.1□□□□□ -1.11
SF3A3-204ENST00000462258 HSPA13P48723 471 aa8.1□□□□□ -1.11
SF3A3-204ENST00000462258 LOXL3P58215 753 aa8.1□□□□□ -1.11
SF3A3-204ENST00000462258 RPS25P62851 125 aaKnown RBP8.1□□□□□ -1.11
SF3A3-204ENST00000462258 Q3ZCU0 254 aa8.1□□□□□ -1.11
SF3A3-204ENST00000462258 PDLIM3Q53GG5 364 aaPredicted RBP8.1□□□□□ -1.11
SF3A3-204ENST00000462258 C9orf152Q5JTZ5 239 aa8.1□□□□□ -1.11
SF3A3-204ENST00000462258 SIGIRRQ6IA17 410 aa8.1□□□□□ -1.11
SF3A3-204ENST00000462258 FAM53AQ6NSI3 398 aaPredicted RBP8.1□□□□□ -1.11
SF3A3-204ENST00000462258 CEACAM19Q7Z692 300 aa8.1□□□□□ -1.11
SF3A3-204ENST00000462258 THNSL2Q86YJ6 484 aa8.1□□□□□ -1.11
SF3A3-204ENST00000462258 LINC00311Q8N616 119 aa8.1□□□□□ -1.11
SF3A3-204ENST00000462258 C8orf31Q8N9H6 132 aa8.1□□□□□ -1.11
SF3A3-204ENST00000462258 CYYR1Q96J86 154 aa8.1□□□□□ -1.11
SF3A3-204ENST00000462258 TMEM59Q9BXS4 323 aa8.1□□□□□ -1.11
SF3A3-204ENST00000462258 CCDC90BQ9GZT6 254 aa8.1□□□□□ -1.11
SF3A3-204ENST00000462258 KCNK15Q9H427 330 aa8.1□□□□□ -1.11
SF3A3-204ENST00000462258 DUSP21Q9H596 190 aa8.1□□□□□ -1.11
SF3A3-204ENST00000462258 GNG12Q9UBI6 72 aa8.1□□□□□ -1.11
SF3A3-204ENST00000462258 IGHV1-3A0A0C4DH29 117 aa8.09□□□□□ -1.11
SF3A3-204ENST00000462258 UBE2QL1A1L167 161 aa8.09□□□□□ -1.11
SF3A3-204ENST00000462258 ADARB2-AS1A8MUL3 147 aa8.09□□□□□ -1.11
SF3A3-204ENST00000462258 SLC22A1O15245 554 aa8.09□□□□□ -1.11
SF3A3-204ENST00000462258 SLC31A2O15432 143 aa8.09□□□□□ -1.11
SF3A3-204ENST00000462258 FGF16O43320 207 aa8.09□□□□□ -1.11
SF3A3-204ENST00000462258 HBZP02008 142 aa8.09□□□□□ -1.11
SF3A3-204ENST00000462258 GLAP06280 429 aa8.09□□□□□ -1.11
SF3A3-204ENST00000462258 RCC1P18754 421 aaPredicted RBP8.09□□□□□ -1.11
SF3A3-204ENST00000462258 SRMP19623 302 aa8.09□□□□□ -1.11
SF3A3-204ENST00000462258 CRHBPP24387 322 aa8.09□□□□□ -1.11
SF3A3-204ENST00000462258 PSMA1P25786 263 aaKnown RBP8.09□□□□□ -1.11
SF3A3-204ENST00000462258 RPS27AP62979 156 aaKnown RBP8.09□□□□□ -1.11
SF3A3-204ENST00000462258 MLLT11Q13015 90 aaPredicted RBP8.09□□□□□ -1.11
SF3A3-204ENST00000462258 C1orf100Q5SVJ3 147 aa8.09□□□□□ -1.11
SF3A3-204ENST00000462258 OR10K2Q6IF99 312 aa8.09□□□□□ -1.11
SF3A3-204ENST00000462258 PRSS48Q7RTY5 328 aa8.09□□□□□ -1.11
SF3A3-204ENST00000462258 IZUMO1Q8IYV9 350 aa8.09□□□□□ -1.11
SF3A3-204ENST00000462258 C5orf56Q8N8D9 126 aa8.09□□□□□ -1.11
SF3A3-204ENST00000462258 ZNF439Q8NDP4 499 aa8.09□□□□□ -1.11
SF3A3-204ENST00000462258 OR4F17Q8NGA8 305 aa8.09□□□□□ -1.11
SF3A3-204ENST00000462258 OR5AU1Q8NGC0 362 aa8.09□□□□□ -1.11
SF3A3-204ENST00000462258 OR4X2Q8NGF9 303 aa8.09□□□□□ -1.11
SF3A3-204ENST00000462258 OR10V1Q8NGI7 309 aa8.09□□□□□ -1.11
SF3A3-204ENST00000462258 OR6M1Q8NGM8 313 aa8.09□□□□□ -1.11
SF3A3-204ENST00000462258 OR1L1Q8NH94 360 aa8.09□□□□□ -1.11
SF3A3-204ENST00000462258 MRPL30Q8TCC3 161 aaKnown RBP8.09□□□□□ -1.11
SF3A3-204ENST00000462258 RTN4IP1Q8WWV3 396 aaPredicted RBP8.09□□□□□ -1.11
SF3A3-204ENST00000462258 TMEM203Q969S6 136 aa8.09□□□□□ -1.11
SF3A3-204ENST00000462258 R3HDM4Q96D70 268 aa8.09□□□□□ -1.11
SF3A3-204ENST00000462258 CNBD2Q96M20 576 aa8.09□□□□□ -1.11
SF3A3-204ENST00000462258 OR4F4Q96R69 305 aa8.09□□□□□ -1.11
SF3A3-204ENST00000462258 IGHV3-72A0A0B4J1Y9 119 aa8.08□□□□□ -1.12
SF3A3-204ENST00000462258 A0A1W2PRX2 142 aa8.08□□□□□ -1.12
SF3A3-204ENST00000462258 G3V4G9 280 aa8.08□□□□□ -1.12
SF3A3-204ENST00000462258 TXNL1O43396 289 aa8.08□□□□□ -1.12
SF3A3-204ENST00000462258 ARL6IP5O75915 188 aa8.08□□□□□ -1.12
SF3A3-204ENST00000462258 BPNT1O95861 308 aa8.08□□□□□ -1.12
SF3A3-204ENST00000462258 GAPDHP04406 335 aaKnown RBP8.08□□□□□ -1.12
SF3A3-204ENST00000462258 CHATP28329 748 aa8.08□□□□□ -1.12
SF3A3-204ENST00000462258 HTR2CP28335 458 aa8.08□□□□□ -1.12
SF3A3-204ENST00000462258 MAP2K4P45985 399 aa8.08□□□□□ -1.12
SF3A3-204ENST00000462258 EMX1Q04741 257 aaPredicted RBP8.08□□□□□ -1.12
SF3A3-204ENST00000462258 UNC119Q13432 240 aa8.08□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 76.9 ms