RNA–Protein interactions for RNA: ENST00000452448.6

EPHA3-202, Transcript of EPH receptor A3, humanhuman

TSL 1 (best) BASIC

Gene EPHA3, Length 2,546 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EPHA3-202ENST00000452448 C9JAW5 83 aa4.25□□□□□ -1.73
EPHA3-202ENST00000452448 H7C1C5 153 aa4.25□□□□□ -1.73
EPHA3-202ENST00000452448 MLNRO43193 412 aa4.25□□□□□ -1.73
EPHA3-202ENST00000452448 HYPMO75409 117 aa4.25□□□□□ -1.73
EPHA3-202ENST00000452448 CLDN11O75508 207 aa4.25□□□□□ -1.73
EPHA3-202ENST00000452448 REG1AP05451 166 aa4.25□□□□□ -1.73
EPHA3-202ENST00000452448 CT45A8P0DMV1 189 aa4.25□□□□□ -1.73
EPHA3-202ENST00000452448 CT45A9P0DMV2 189 aa4.25□□□□□ -1.73
EPHA3-202ENST00000452448 GPD1P21695 349 aa4.25□□□□□ -1.73
EPHA3-202ENST00000452448 PRPH2P23942 346 aa4.25□□□□□ -1.73
EPHA3-202ENST00000452448 NTSP30990 170 aa4.25□□□□□ -1.73
EPHA3-202ENST00000452448 GPM6AP51674 278 aa4.25□□□□□ -1.73
EPHA3-202ENST00000452448 ZNF134P52741 427 aa4.25□□□□□ -1.73
EPHA3-202ENST00000452448 XGP55808 180 aa4.25□□□□□ -1.73
EPHA3-202ENST00000452448 NXPH1P58417 271 aa4.25□□□□□ -1.73
EPHA3-202ENST00000452448 POLR2LP62875 67 aaKnown RBP4.25□□□□□ -1.73
EPHA3-202ENST00000452448 GRB2P62993 217 aaKnown RBP4.25□□□□□ -1.73
EPHA3-202ENST00000452448 SLC35A1P78382 337 aa4.25□□□□□ -1.73
EPHA3-202ENST00000452448 CT45A2Q5DJT8 189 aa4.25□□□□□ -1.73
EPHA3-202ENST00000452448 RASL11AQ6T310 242 aa4.25□□□□□ -1.73
EPHA3-202ENST00000452448 FOXI2Q6ZQN5 318 aa4.25□□□□□ -1.73
EPHA3-202ENST00000452448 Q6ZTK2 550 aa4.25□□□□□ -1.73
EPHA3-202ENST00000452448 TMEM173Q86WV6 379 aaPredicted RBP4.25□□□□□ -1.73
EPHA3-202ENST00000452448 OR2L13Q8N349 312 aa4.25□□□□□ -1.73
EPHA3-202ENST00000452448 SPEM1Q8N4L4 309 aa4.25□□□□□ -1.73
EPHA3-202ENST00000452448 ZNF548Q8NEK5 533 aaPredicted RBP4.25□□□□□ -1.73
EPHA3-202ENST00000452448 OR5AR1Q8NGP9 310 aa4.25□□□□□ -1.73
EPHA3-202ENST00000452448 OR6K2Q8NGY2 324 aa4.25□□□□□ -1.73
EPHA3-202ENST00000452448 SLAMF6Q96DU3 332 aa4.25□□□□□ -1.73
EPHA3-202ENST00000452448 MRPL53Q96EL3 112 aaKnown RBP4.25□□□□□ -1.73
EPHA3-202ENST00000452448 ADTRPQ96IZ2 230 aa4.25□□□□□ -1.73
EPHA3-202ENST00000452448 ZNF681Q96N22 645 aa4.25□□□□□ -1.73
EPHA3-202ENST00000452448 MS4A6AQ9H2W1 248 aa4.25□□□□□ -1.73
EPHA3-202ENST00000452448 RBM22Q9NW64 420 aaKnown RBP eCLIP4.25□□□□□ -1.73
EPHA3-202ENST00000452448 LHX3Q9UBR4 397 aa4.25□□□□□ -1.73
EPHA3-202ENST00000452448 IL36AQ9UHA7 158 aa4.25□□□□□ -1.73
EPHA3-202ENST00000452448 HIGD1AQ9Y241 93 aa4.25□□□□□ -1.73
EPHA3-202ENST00000452448 ZNF646O15015 1829 aaPredicted RBP4.24□□□□□ -1.73
EPHA3-202ENST00000452448 FRG2CA6NGY1 282 aa4.24□□□□□ -1.73
EPHA3-202ENST00000452448 C9JQL5 133 aa4.24□□□□□ -1.73
EPHA3-202ENST00000452448 NPIPB11E5RHQ5 1161 aa4.24□□□□□ -1.73
EPHA3-202ENST00000452448 SH2D1BO14796 132 aa4.24□□□□□ -1.73
EPHA3-202ENST00000452448 TIAF1O95411 115 aa4.24□□□□□ -1.73
EPHA3-202ENST00000452448 CRYGDP07320 174 aa4.24□□□□□ -1.73
EPHA3-202ENST00000452448 NHLRC4P0CG21 123 aaPredicted RBP4.24□□□□□ -1.73
EPHA3-202ENST00000452448 PRSS56P0CW18 603 aa4.24□□□□□ -1.73
EPHA3-202ENST00000452448 ZNF728P0DKX0 622 aa4.24□□□□□ -1.73
EPHA3-202ENST00000452448 LINC00694P0DN24 101 aa4.24□□□□□ -1.73
EPHA3-202ENST00000452448 ZNF37AP17032 561 aaPredicted RBP4.24□□□□□ -1.73
EPHA3-202ENST00000452448 CDAP32320 146 aa4.24□□□□□ -1.73
EPHA3-202ENST00000452448 RBM11P57052 281 aaKnown RBP4.24□□□□□ -1.73
EPHA3-202ENST00000452448 ZNF730Q6ZMV8 503 aa4.24□□□□□ -1.73
EPHA3-202ENST00000452448 PPP1R32Q7Z5V6 425 aa4.24□□□□□ -1.73
EPHA3-202ENST00000452448 ACOT1Q86TX2 421 aa4.24□□□□□ -1.73
EPHA3-202ENST00000452448 DTX2Q86UW9 622 aa4.24□□□□□ -1.73
EPHA3-202ENST00000452448 TMEM86BQ8N661 226 aa4.24□□□□□ -1.73
EPHA3-202ENST00000452448 OR1L8Q8NGR8 309 aa4.24□□□□□ -1.73
EPHA3-202ENST00000452448 JOSD2Q8TAC2 188 aa4.24□□□□□ -1.73
EPHA3-202ENST00000452448 SLC25A46Q96AG3 418 aa4.24□□□□□ -1.73
EPHA3-202ENST00000452448 ACY3Q96HD9 319 aa4.24□□□□□ -1.73
EPHA3-202ENST00000452448 FAM173AQ9BQD7 235 aa4.24□□□□□ -1.73
EPHA3-202ENST00000452448 ZNF670Q9BS34 389 aa4.24□□□□□ -1.73
EPHA3-202ENST00000452448 SNRNP25Q9BV90 132 aaKnown RBP4.24□□□□□ -1.73
EPHA3-202ENST00000452448 RNASE7Q9H1E1 156 aaKnown RBP4.24□□□□□ -1.73
EPHA3-202ENST00000452448 MOB1AQ9H8S9 216 aa4.24□□□□□ -1.73
EPHA3-202ENST00000452448 GPR84Q9NQS5 396 aa4.24□□□□□ -1.73
EPHA3-202ENST00000452448 RLIMQ9NVW2 624 aa4.24□□□□□ -1.73
EPHA3-202ENST00000452448 LOXL2Q9Y4K0 774 aa4.24□□□□□ -1.73
EPHA3-202ENST00000452448 R4GN57 208 aa4.24□□□□□ -1.73
EPHA3-202ENST00000452448 IGKV6D-21A0A0A0MT36 114 aa4.24□□□□□ -1.73
EPHA3-202ENST00000452448 TRAV8-6A0A0B4J262 113 aa4.24□□□□□ -1.73
EPHA3-202ENST00000452448 A0A1W2PRD5 423 aa4.24□□□□□ -1.73
EPHA3-202ENST00000452448 RNF222A6NCQ9 220 aa4.24□□□□□ -1.73
EPHA3-202ENST00000452448 USP17L23D6RBM5 183 aa4.24□□□□□ -1.73
EPHA3-202ENST00000452448 ZNF670-ZNF695F2Z2N8 137 aa4.24□□□□□ -1.73
EPHA3-202ENST00000452448 UBL3O95164 117 aa4.24□□□□□ -1.73
EPHA3-202ENST00000452448 DBIP07108 87 aaKnown RBP4.24□□□□□ -1.73
EPHA3-202ENST00000452448 FAM157CP0CG43 387 aa4.24□□□□□ -1.73
EPHA3-202ENST00000452448 IGLC2P0DOY2 106 aa4.24□□□□□ -1.73
EPHA3-202ENST00000452448 IGLC3P0DOY3 106 aa4.24□□□□□ -1.73
EPHA3-202ENST00000452448 ZNF43P17038 809 aa4.24□□□□□ -1.73
EPHA3-202ENST00000452448 PSMB1P20618 241 aaKnown RBP4.24□□□□□ -1.73
EPHA3-202ENST00000452448 EVI2AP22794 236 aa4.24□□□□□ -1.73
EPHA3-202ENST00000452448 TSPOP30536 169 aa4.24□□□□□ -1.73
EPHA3-202ENST00000452448 STC1P52823 247 aa4.24□□□□□ -1.73
EPHA3-202ENST00000452448 RUNX3Q13761 415 aa4.24□□□□□ -1.73
EPHA3-202ENST00000452448 EXOSC7Q15024 291 aaKnown RBP4.24□□□□□ -1.73
EPHA3-202ENST00000452448 GLYATL3Q5SZD4 288 aa4.24□□□□□ -1.73
EPHA3-202ENST00000452448 C1orf195Q5TG92 126 aa4.24□□□□□ -1.73
EPHA3-202ENST00000452448 LYSMD4Q5XG99 296 aa4.24□□□□□ -1.73
EPHA3-202ENST00000452448 STUMQ69YW2 141 aa4.24□□□□□ -1.73
EPHA3-202ENST00000452448 APOOLQ6UXV4 268 aa4.24□□□□□ -1.73
EPHA3-202ENST00000452448 KCNRGQ8N5I3 272 aa4.24□□□□□ -1.73
EPHA3-202ENST00000452448 TCEANCQ8N8B7 351 aa4.24□□□□□ -1.73
EPHA3-202ENST00000452448 SUMF2Q8NBJ7 301 aa4.24□□□□□ -1.73
EPHA3-202ENST00000452448 HMGCLL1Q8TB92 370 aa4.24□□□□□ -1.73
EPHA3-202ENST00000452448 SYNPRQ8TBG9 265 aa4.24□□□□□ -1.73
EPHA3-202ENST00000452448 PLPPR1Q8TBJ4 325 aa4.24□□□□□ -1.73
EPHA3-202ENST00000452448 C15orf40Q8WUR7 153 aa4.24□□□□□ -1.73
EPHA3-202ENST00000452448 THEM6Q8WUY1 208 aa4.24□□□□□ -1.73
Retrieved 100 of 20,778 RNA–protein pairs in 43.4 ms