RNA–Protein interactions for RNA: ENST00000371820.3

COL5A1-202, Transcript of collagen type V alpha 1 chain, humanhuman

TSL 2

Gene COL5A1, Length 628 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL5A1-202ENST00000371820 LRTM2Q8N967 370 aa8.78□□□□□ -1
COL5A1-202ENST00000371820 ZSCAN4Q8NAM6 433 aaPredicted RBP8.78□□□□□ -1
COL5A1-202ENST00000371820 BPIFCQ8NFQ6 507 aa8.78□□□□□ -1
COL5A1-202ENST00000371820 ZNF799Q96GE5 643 aa8.78□□□□□ -1
COL5A1-202ENST00000371820 NARS2Q96I59 477 aaKnown RBP8.78□□□□□ -1
COL5A1-202ENST00000371820 RTBDNQ9BSG5 229 aaPredicted RBP8.78□□□□□ -1
COL5A1-202ENST00000371820 ST6GALNAC5Q9BVH7 336 aa8.78□□□□□ -1
COL5A1-202ENST00000371820 C5orf66Q9H5L9 145 aa8.78□□□□□ -1
COL5A1-202ENST00000371820 PARP11Q9NR21 331 aa8.78□□□□□ -1
COL5A1-202ENST00000371820 IL36GQ9NZH8 169 aa8.78□□□□□ -1
COL5A1-202ENST00000371820 LPAR3Q9UBY5 353 aa8.78□□□□□ -1
COL5A1-202ENST00000371820 ZNF230Q9UIE0 474 aaPredicted RBP8.78□□□□□ -1
COL5A1-202ENST00000371820 ATPIF1Q9UII2 106 aa8.78□□□□□ -1
COL5A1-202ENST00000371820 DUSP13Q9UII6 198 aa8.78□□□□□ -1
COL5A1-202ENST00000371820 PCDHB10Q9UN67 800 aa8.78□□□□□ -1
COL5A1-202ENST00000371820 NSG2Q9Y328 171 aa8.78□□□□□ -1
COL5A1-202ENST00000371820 F8W036 122 aa8.77□□□□□ -1.01
COL5A1-202ENST00000371820 DNASE2O00115 360 aaPredicted RBP8.77□□□□□ -1.01
COL5A1-202ENST00000371820 CCSO14618 274 aa8.77□□□□□ -1.01
COL5A1-202ENST00000371820 RER1O15258 196 aa8.77□□□□□ -1.01
COL5A1-202ENST00000371820 FAM157CP0CG43 387 aa8.77□□□□□ -1.01
COL5A1-202ENST00000371820 CCNOP22674 350 aa8.77□□□□□ -1.01
COL5A1-202ENST00000371820 GCH1P30793 250 aa8.77□□□□□ -1.01
COL5A1-202ENST00000371820 CDAP32320 146 aa8.77□□□□□ -1.01
COL5A1-202ENST00000371820 OR3A4PP47883 348 aa8.77□□□□□ -1.01
COL5A1-202ENST00000371820 SULT1A2P50226 295 aa8.77□□□□□ -1.01
COL5A1-202ENST00000371820 NPY4RP50391 375 aa8.77□□□□□ -1.01
COL5A1-202ENST00000371820 CAV2P51636 162 aa8.77□□□□□ -1.01
COL5A1-202ENST00000371820 F2RL1P55085 397 aa8.77□□□□□ -1.01
COL5A1-202ENST00000371820 UCP2P55851 309 aa8.77□□□□□ -1.01
COL5A1-202ENST00000371820 IL15RAQ13261 267 aa8.77□□□□□ -1.01
COL5A1-202ENST00000371820 PEA15Q15121 130 aa8.77□□□□□ -1.01
COL5A1-202ENST00000371820 RSU1Q15404 277 aa8.77□□□□□ -1.01
COL5A1-202ENST00000371820 FAM76BQ5HYJ3 339 aa8.77□□□□□ -1.01
COL5A1-202ENST00000371820 PLAC9Q5JTB6 97 aa8.77□□□□□ -1.01
COL5A1-202ENST00000371820 POC1AQ8NBT0 407 aa8.77□□□□□ -1.01
COL5A1-202ENST00000371820 OR1J1Q8NGS3 322 aa8.77□□□□□ -1.01
COL5A1-202ENST00000371820 NABP1Q96AH0 204 aa8.77□□□□□ -1.01
COL5A1-202ENST00000371820 MRGPRFQ96AM1 343 aa8.77□□□□□ -1.01
COL5A1-202ENST00000371820 CMBLQ96DG6 245 aa8.77□□□□□ -1.01
COL5A1-202ENST00000371820 GALNT14Q96FL9 552 aa8.77□□□□□ -1.01
COL5A1-202ENST00000371820 ABHD14BQ96IU4 210 aa8.77□□□□□ -1.01
COL5A1-202ENST00000371820 SMIM8Q96KF7 97 aa8.77□□□□□ -1.01
COL5A1-202ENST00000371820 BPESC1Q9GZL8 116 aa8.77□□□□□ -1.01
COL5A1-202ENST00000371820 FAM212BQ9NTI7 297 aaPredicted RBP8.77□□□□□ -1.01
COL5A1-202ENST00000371820 TMEM160Q9NX00 188 aa8.77□□□□□ -1.01
COL5A1-202ENST00000371820 PLEK2Q9NYT0 353 aa8.77□□□□□ -1.01
COL5A1-202ENST00000371820 CDC42EP3Q9UKI2 254 aa8.77□□□□□ -1.01
COL5A1-202ENST00000371820 KCNS2Q9ULS6 477 aa8.77□□□□□ -1.01
COL5A1-202ENST00000371820 PIGLQ9Y2B2 252 aa8.77□□□□□ -1.01
COL5A1-202ENST00000371820 STRAPQ9Y3F4 350 aaKnown RBP8.77□□□□□ -1.01
COL5A1-202ENST00000371820 TIMM10BQ9Y5J6 103 aa8.77□□□□□ -1.01
COL5A1-202ENST00000371820 ALPK2Q86TB3 2170 aa8.77□□□□□ -1.01
COL5A1-202ENST00000371820 IGLV3-9A0A075B6K5 115 aa8.76□□□□□ -1.01
COL5A1-202ENST00000371820 LOC100509620A0A075B734 347 aa8.76□□□□□ -1.01
COL5A1-202ENST00000371820 A0A0A6YYD4 124 aa8.76□□□□□ -1.01
COL5A1-202ENST00000371820 OR6C6A6NF89 314 aa8.76□□□□□ -1.01
COL5A1-202ENST00000371820 CRYM-AS1A6NIL9 109 aa8.76□□□□□ -1.01
COL5A1-202ENST00000371820 ZNF705EA8MWA4 302 aaPredicted RBP8.76□□□□□ -1.01
COL5A1-202ENST00000371820 F5H5K5 113 aa8.76□□□□□ -1.01
COL5A1-202ENST00000371820 TRIM77I1YAP6 450 aa8.76□□□□□ -1.01
COL5A1-202ENST00000371820 K7EPK0 472 aa8.76□□□□□ -1.01
COL5A1-202ENST00000371820 XRCC2O43543 280 aa8.76□□□□□ -1.01
COL5A1-202ENST00000371820 SGCEO43556 437 aa8.76□□□□□ -1.01
COL5A1-202ENST00000371820 CTXN2P0C2S0 81 aa8.76□□□□□ -1.01
COL5A1-202ENST00000371820 SEC11BP0C7V7 166 aa8.76□□□□□ -1.01
COL5A1-202ENST00000371820 TMEM225BP0DP42 221 aa8.76□□□□□ -1.01
COL5A1-202ENST00000371820 COX5BP10606 129 aa8.76□□□□□ -1.01
COL5A1-202ENST00000371820 CCL2P13500 99 aa8.76□□□□□ -1.01
COL5A1-202ENST00000371820 ZNF16P17020 682 aaPredicted RBP8.76□□□□□ -1.01
COL5A1-202ENST00000371820 GLP1RP43220 463 aa8.76□□□□□ -1.01
COL5A1-202ENST00000371820 MTCP1P56278 107 aa8.76□□□□□ -1.01
COL5A1-202ENST00000371820 MRPS11P82912 194 aaKnown RBP8.76□□□□□ -1.01
COL5A1-202ENST00000371820 PSG4Q00888 419 aa8.76□□□□□ -1.01
COL5A1-202ENST00000371820 ENDOGQ14249 297 aaKnown RBP8.76□□□□□ -1.01
COL5A1-202ENST00000371820 RBM39Q14498 530 aaKnown RBP8.76□□□□□ -1.01
COL5A1-202ENST00000371820 IL13RA2Q14627 380 aa8.76□□□□□ -1.01
COL5A1-202ENST00000371820 ZNF718Q3SXZ3 478 aa8.76□□□□□ -1.01
COL5A1-202ENST00000371820 ABCA11PQ4W5N1 156 aa8.76□□□□□ -1.01
COL5A1-202ENST00000371820 AADACL3Q5VUY0 350 aa8.76□□□□□ -1.01
COL5A1-202ENST00000371820 DHRS7BQ6IAN0 325 aaPredicted RBP8.76□□□□□ -1.01
COL5A1-202ENST00000371820 HAGHLQ6PII5 290 aaPredicted RBP8.76□□□□□ -1.01
COL5A1-202ENST00000371820 C17orf107Q6ZR85 190 aa8.76□□□□□ -1.01
COL5A1-202ENST00000371820 LGI3Q8N145 548 aa8.76□□□□□ -1.01
COL5A1-202ENST00000371820 TMEM104Q8NE00 496 aa8.76□□□□□ -1.01
COL5A1-202ENST00000371820 OR1S2Q8NGQ3 325 aa8.76□□□□□ -1.01
COL5A1-202ENST00000371820 OR10Z1Q8NGY1 313 aa8.76□□□□□ -1.01
COL5A1-202ENST00000371820 OR13G1Q8NGZ3 307 aa8.76□□□□□ -1.01
COL5A1-202ENST00000371820 TMEM158Q8WZ71 300 aa8.76□□□□□ -1.01
COL5A1-202ENST00000371820 RDH5Q92781 318 aa8.76□□□□□ -1.01
COL5A1-202ENST00000371820 BORCS8Q96FH0 119 aa8.76□□□□□ -1.01
COL5A1-202ENST00000371820 POM121L2Q96KW2 1035 aa8.76□□□□□ -1.01
COL5A1-202ENST00000371820 SPIN2AQ99865 258 aa8.76□□□□□ -1.01
COL5A1-202ENST00000371820 MICU1Q9BPX6 476 aa8.76□□□□□ -1.01
COL5A1-202ENST00000371820 SPIN2BQ9BPZ2 258 aa8.76□□□□□ -1.01
COL5A1-202ENST00000371820 NICN1Q9BSH3 213 aa8.76□□□□□ -1.01
COL5A1-202ENST00000371820 OR2H1Q9GZK4 316 aa8.76□□□□□ -1.01
COL5A1-202ENST00000371820 OR51B6Q9H340 312 aa8.76□□□□□ -1.01
COL5A1-202ENST00000371820 BANF2Q9H503 90 aa8.76□□□□□ -1.01
COL5A1-202ENST00000371820 CHODLQ9H9P2 273 aa8.76□□□□□ -1.01
Retrieved 100 of 20,778 RNA–protein pairs in 56.5 ms