RNA–Protein interactions for RNA: ENST00000316433.8

ZNF540-201, Transcript of zinc finger protein 540, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene ZNF540, Length 3,099 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF540-201ENST00000316433 THYN1Q9P016 225 aa5.74□□□□□ -1.49
ZNF540-201ENST00000316433 CLEC1BQ9P126 229 aa5.74□□□□□ -1.49
ZNF540-201ENST00000316433 SS18L2Q9UHA2 77 aa5.74□□□□□ -1.49
ZNF540-201ENST00000316433 TP53TG3Q9ULZ0 132 aa5.74□□□□□ -1.49
ZNF540-201ENST00000316433 IER3IP1Q9Y5U9 82 aa5.74□□□□□ -1.49
ZNF540-201ENST00000316433 FANCMQ8IYD8 2048 aa5.74□□□□□ -1.49
ZNF540-201ENST00000316433 OR11H12B2RN74 326 aa5.73□□□□□ -1.49
ZNF540-201ENST00000316433 SERF1AO75920 110 aa5.73□□□□□ -1.49
ZNF540-201ENST00000316433 SMIM17P0DL12 118 aa5.73□□□□□ -1.49
ZNF540-201ENST00000316433 PI3P19957 117 aa5.73□□□□□ -1.49
ZNF540-201ENST00000316433 ATP6V0CP27449 155 aa5.73□□□□□ -1.49
ZNF540-201ENST00000316433 LCN2P80188 198 aa5.73□□□□□ -1.49
ZNF540-201ENST00000316433 EGR4Q05215 589 aa5.73□□□□□ -1.49
ZNF540-201ENST00000316433 ZNF154Q13106 437 aa5.73□□□□□ -1.49
ZNF540-201ENST00000316433 TRMT12Q53H54 448 aaKnown RBP5.73□□□□□ -1.49
ZNF540-201ENST00000316433 RD3Q7Z3Z2 195 aa5.73□□□□□ -1.49
ZNF540-201ENST00000316433 OR11H1Q8NG94 326 aa5.73□□□□□ -1.49
ZNF540-201ENST00000316433 OR11H2Q8NH07 326 aa5.73□□□□□ -1.49
ZNF540-201ENST00000316433 FNDC9Q8TBE3 224 aa5.73□□□□□ -1.49
ZNF540-201ENST00000316433 TSEN15Q8WW01 171 aaKnown RBP5.73□□□□□ -1.49
ZNF540-201ENST00000316433 WDYHV1Q96HA8 205 aa5.73□□□□□ -1.49
ZNF540-201ENST00000316433 FER1L6-AS2Q96M78 137 aa5.73□□□□□ -1.49
ZNF540-201ENST00000316433 TSPAN32Q96QS1 320 aa5.73□□□□□ -1.49
ZNF540-201ENST00000316433 GNG13Q9P2W3 67 aa5.73□□□□□ -1.49
ZNF540-201ENST00000316433 PRSS50Q9UI38 385 aa5.73□□□□□ -1.49
ZNF540-201ENST00000316433 SLC22A13Q9Y226 551 aa5.73□□□□□ -1.49
ZNF540-201ENST00000316433 RNF114Q9Y508 228 aa5.73□□□□□ -1.49
ZNF540-201ENST00000316433 SNRNP200O75643 2136 aaKnown RBP5.73□□□□□ -1.49
ZNF540-201ENST00000316433 GRIFINA4D1Z8 144 aa5.73□□□□□ -1.49
ZNF540-201ENST00000316433 JMJD7P0C870 316 aa5.73□□□□□ -1.49
ZNF540-201ENST00000316433 CDKN2AP42771 156 aaKnown RBP5.73□□□□□ -1.49
ZNF540-201ENST00000316433 MRPS21P82921 87 aaKnown RBP5.73□□□□□ -1.49
ZNF540-201ENST00000316433 RUNX3Q13761 415 aa5.73□□□□□ -1.49
ZNF540-201ENST00000316433 SLC18B1Q6NT16 456 aa5.73□□□□□ -1.49
ZNF540-201ENST00000316433 KCNIP4Q6PIL6 250 aa5.73□□□□□ -1.49
ZNF540-201ENST00000316433 Q6ZS49 121 aa5.73□□□□□ -1.49
ZNF540-201ENST00000316433 BCORP1Q8N888 145 aa5.73□□□□□ -1.49
ZNF540-201ENST00000316433 FGF14Q92915 247 aa5.73□□□□□ -1.49
ZNF540-201ENST00000316433 DDIT4LQ96D03 193 aa5.73□□□□□ -1.49
ZNF540-201ENST00000316433 DERL1Q9BUN8 251 aa5.73□□□□□ -1.49
ZNF540-201ENST00000316433 TM2D1Q9BX74 207 aa5.73□□□□□ -1.49
ZNF540-201ENST00000316433 TMEM140Q9NV12 185 aa5.73□□□□□ -1.49
ZNF540-201ENST00000316433 PEF1Q9UBV8 284 aaKnown RBP5.73□□□□□ -1.49
ZNF540-201ENST00000316433 TRAV27A0A087WT01 109 aa5.73□□□□□ -1.49
ZNF540-201ENST00000316433 TRAV8-6A0A0B4J262 113 aa5.73□□□□□ -1.49
ZNF540-201ENST00000316433 PIGBOS1A0A0B4J2F0 54 aa5.73□□□□□ -1.49
ZNF540-201ENST00000316433 SPAARA0A1B0GVQ0 90 aa5.73□□□□□ -1.49
ZNF540-201ENST00000316433 GAGE10A6NGK3 116 aa5.73□□□□□ -1.49
ZNF540-201ENST00000316433 SH2D1BO14796 132 aa5.73□□□□□ -1.49
ZNF540-201ENST00000316433 BCL2P10415 239 aa5.73□□□□□ -1.49
ZNF540-201ENST00000316433 OMGP23515 440 aa5.73□□□□□ -1.49
ZNF540-201ENST00000316433 DUSP1P28562 367 aa5.73□□□□□ -1.49
ZNF540-201ENST00000316433 FASLGP48023 281 aa5.73□□□□□ -1.49
ZNF540-201ENST00000316433 CYB561P49447 251 aa5.73□□□□□ -1.49
ZNF540-201ENST00000316433 MTCP1P56278 107 aa5.73□□□□□ -1.49
ZNF540-201ENST00000316433 PLP1P60201 277 aa5.73□□□□□ -1.49
ZNF540-201ENST00000316433 ZNF117Q03924 483 aa5.73□□□□□ -1.49
ZNF540-201ENST00000316433 TM4SF20Q53R12 229 aa5.73□□□□□ -1.49
ZNF540-201ENST00000316433 CYP2G1PQ6ZSU1 146 aa5.73□□□□□ -1.49
ZNF540-201ENST00000316433 Q7L0L9 218 aa5.73□□□□□ -1.49
ZNF540-201ENST00000316433 LSRQ86X29 649 aaPredicted RBP5.73□□□□□ -1.49
ZNF540-201ENST00000316433 ST8SIA1Q92185 356 aa5.73□□□□□ -1.49
ZNF540-201ENST00000316433 RERGQ96A58 199 aaPredicted RBP5.73□□□□□ -1.49
ZNF540-201ENST00000316433 ANAPC16Q96DE5 110 aa5.73□□□□□ -1.49
ZNF540-201ENST00000316433 C6orf106Q9H6K1 298 aaPredicted RBP5.73□□□□□ -1.49
ZNF540-201ENST00000316433 METTL7AQ9H8H3 244 aa5.73□□□□□ -1.49
ZNF540-201ENST00000316433 C1orf123Q9NWV4 160 aa5.73□□□□□ -1.49
ZNF540-201ENST00000316433 NSG1A0A0A6YYJ2 146 aa5.72□□□□□ -1.49
ZNF540-201ENST00000316433 PRSS37A4D1T9 235 aa5.72□□□□□ -1.49
ZNF540-201ENST00000316433 H0YGG7 62 aa5.72□□□□□ -1.49
ZNF540-201ENST00000316433 CT62P0C5K7 136 aa5.72□□□□□ -1.49
ZNF540-201ENST00000316433 IL3RAP26951 378 aa5.72□□□□□ -1.49
ZNF540-201ENST00000316433 ADMP35318 185 aa5.72□□□□□ -1.49
ZNF540-201ENST00000316433 ZNF93P35789 620 aaPredicted RBP5.72□□□□□ -1.49
ZNF540-201ENST00000316433 ARF3P61204 181 aaPredicted RBP5.72□□□□□ -1.49
ZNF540-201ENST00000316433 RPL27P61353 136 aaKnown RBP5.72□□□□□ -1.49
ZNF540-201ENST00000316433 LCN6P62502 163 aa5.72□□□□□ -1.49
ZNF540-201ENST00000316433 ZNF266Q14584 549 aa5.72□□□□□ -1.49
ZNF540-201ENST00000316433 ALG10Q5BKT4 473 aa5.72□□□□□ -1.49
ZNF540-201ENST00000316433 UFSP1Q6NVU6 142 aa5.72□□□□□ -1.49
ZNF540-201ENST00000316433 LHFPL2Q6ZUX7 228 aa5.72□□□□□ -1.49
ZNF540-201ENST00000316433 SIGLECL1Q8N7X8 197 aa5.72□□□□□ -1.49
ZNF540-201ENST00000316433 OR10G3Q8NGC4 313 aa5.72□□□□□ -1.49
ZNF540-201ENST00000316433 OR10AC1Q8NH08 325 aa5.72□□□□□ -1.49
ZNF540-201ENST00000316433 OR52N5Q8NH56 324 aa5.72□□□□□ -1.49
ZNF540-201ENST00000316433 RNF133Q8WVZ7 376 aa5.72□□□□□ -1.49
ZNF540-201ENST00000316433 P2RX4Q99571 388 aa5.72□□□□□ -1.49
ZNF540-201ENST00000316433 ATP5SQ99766 215 aa5.72□□□□□ -1.49
ZNF540-201ENST00000316433 KXD1Q9BQD3 176 aa5.72□□□□□ -1.49
ZNF540-201ENST00000316433 PTRH2Q9Y3E5 179 aaKnown RBP5.72□□□□□ -1.49
ZNF540-201ENST00000316433 A0A0U1RQK1 487 aa5.72□□□□□ -1.49
ZNF540-201ENST00000316433 C2orf72A6NCS6 295 aa5.72□□□□□ -1.49
ZNF540-201ENST00000316433 ZFP92A6NM28 416 aa5.72□□□□□ -1.49
ZNF540-201ENST00000316433 H3BSH0 61 aa5.72□□□□□ -1.49
ZNF540-201ENST00000316433 ZNF253O75346 499 aa5.72□□□□□ -1.49
ZNF540-201ENST00000316433 HLA-HP01893 362 aa5.72□□□□□ -1.49
ZNF540-201ENST00000316433 C1QTNF9P0C862 333 aa5.72□□□□□ -1.49
ZNF540-201ENST00000316433 AK4P27144 223 aaPredicted RBP5.72□□□□□ -1.49
ZNF540-201ENST00000316433 RTP5Q14D33 572 aa5.72□□□□□ -1.49
ZNF540-201ENST00000316433 HLA-BQ31612 363 aa5.72□□□□□ -1.49
Retrieved 100 of 20,778 RNA–protein pairs in 90.2 ms