RNA–Protein interactions for RNA: ENST00000307340.7

USH2A-201, Transcript of usherin, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene USH2A, Length 18,883 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USH2A-201ENST00000307340 C5orf49A4QMS7 147 aa3.53□□□□□ -1.84
USH2A-201ENST00000307340 C5orf52A6NGY3 159 aa3.53□□□□□ -1.84
USH2A-201ENST00000307340 AQP7O14520 342 aa3.53□□□□□ -1.84
USH2A-201ENST00000307340 ATP5LO75964 103 aa3.53□□□□□ -1.84
USH2A-201ENST00000307340 HTR1DP28221 377 aa3.53□□□□□ -1.84
USH2A-201ENST00000307340 WIPI1Q5MNZ9 446 aaPredicted RBP3.53□□□□□ -1.84
USH2A-201ENST00000307340 CLEC18BQ6UXF7 455 aa3.53□□□□□ -1.84
USH2A-201ENST00000307340 FLYWCH2Q96CP2 140 aaKnown RBP3.53□□□□□ -1.84
USH2A-201ENST00000307340 PRELID3AQ96N28 172 aa3.53□□□□□ -1.84
USH2A-201ENST00000307340 GPR132Q9UNW8 380 aa3.53□□□□□ -1.84
USH2A-201ENST00000307340 LOC102723971A0A1B0GUV8 181 aa3.53□□□□□ -1.84
USH2A-201ENST00000307340 C22orf46C9J442 243 aa3.53□□□□□ -1.84
USH2A-201ENST00000307340 IGLV3-21P80748 117 aaPredicted RBP3.53□□□□□ -1.84
USH2A-201ENST00000307340 ZNF468Q5VIY5 522 aaPredicted RBP3.53□□□□□ -1.84
USH2A-201ENST00000307340 UNQ9370/PRO34162Q6UXP9 181 aa3.53□□□□□ -1.84
USH2A-201ENST00000307340 DTD1Q8TEA8 209 aa3.53□□□□□ -1.84
USH2A-201ENST00000307340 MOB3AQ96BX8 217 aa3.53□□□□□ -1.84
USH2A-201ENST00000307340 TM2D1Q9BX74 207 aa3.53□□□□□ -1.84
USH2A-201ENST00000307340 BARX1Q9HBU1 254 aaPredicted RBP3.53□□□□□ -1.84
USH2A-201ENST00000307340 FBXO45P0C2W1 286 aa3.53□□□□□ -1.85
USH2A-201ENST00000307340 RPS4XP62701 263 aaKnown RBP3.53□□□□□ -1.85
USH2A-201ENST00000307340 TMPRSS9Q7Z410 1059 aa3.53□□□□□ -1.85
USH2A-201ENST00000307340 OR10V1Q8NGI7 309 aa3.53□□□□□ -1.85
USH2A-201ENST00000307340 ZNF860A6NHJ4 632 aa3.52□□□□□ -1.85
USH2A-201ENST00000307340 ZNF785A8K8V0 405 aa3.52□□□□□ -1.85
USH2A-201ENST00000307340 A8MV72 311 aaPredicted RBP3.52□□□□□ -1.85
USH2A-201ENST00000307340 P01737 135 aa3.52□□□□□ -1.85
USH2A-201ENST00000307340 OR10J3Q5JRS4 329 aa3.52□□□□□ -1.85
USH2A-201ENST00000307340 DHRS11Q6UWP2 260 aa3.52□□□□□ -1.85
USH2A-201ENST00000307340 MMD2Q8IY49 270 aa3.52□□□□□ -1.85
USH2A-201ENST00000307340 F2Z2F3 143 aa3.52□□□□□ -1.85
USH2A-201ENST00000307340 PRSS56P0CW18 603 aa3.52□□□□□ -1.85
USH2A-201ENST00000307340 BCL3P20749 454 aa3.52□□□□□ -1.85
USH2A-201ENST00000307340 WDR89Q96FK6 387 aaPredicted RBP3.52□□□□□ -1.85
USH2A-201ENST00000307340 A0A1B0GTH9 108 aa3.52□□□□□ -1.85
USH2A-201ENST00000307340 FCN1O00602 326 aa3.52□□□□□ -1.85
USH2A-201ENST00000307340 TSPAN32Q96QS1 320 aa3.52□□□□□ -1.85
USH2A-201ENST00000307340 SLC7A10Q9NS82 523 aa3.52□□□□□ -1.85
USH2A-201ENST00000307340 COL5A1P20908 1838 aaPredicted RBP3.52□□□□□ -1.85
USH2A-201ENST00000307340 LTBP2Q14767 1821 aa3.52□□□□□ -1.85
USH2A-201ENST00000307340 A8MU76 341 aa3.52□□□□□ -1.85
USH2A-201ENST00000307340 ICOSLGO75144 302 aa3.52□□□□□ -1.85
USH2A-201ENST00000307340 PAX1P15863 534 aa3.52□□□□□ -1.85
USH2A-201ENST00000307340 PDE6HQ13956 83 aa3.52□□□□□ -1.85
USH2A-201ENST00000307340 PUSL1Q8N0Z8 303 aaKnown RBP3.52□□□□□ -1.85
USH2A-201ENST00000307340 OR52B4Q8NGK2 314 aa3.52□□□□□ -1.85
USH2A-201ENST00000307340 SIGLEC11Q96RL6 698 aa3.52□□□□□ -1.85
USH2A-201ENST00000307340 MENTQ9BUN1 341 aa3.52□□□□□ -1.85
USH2A-201ENST00000307340 KLK11Q9UBX7 282 aa3.52□□□□□ -1.85
USH2A-201ENST00000307340 JPT1Q9UK76 154 aa3.52□□□□□ -1.85
USH2A-201ENST00000307340 THSD7BQ9C0I4 1608 aa3.52□□□□□ -1.85
USH2A-201ENST00000307340 IGLV3-32A0A0A0MS00 114 aa3.52□□□□□ -1.85
USH2A-201ENST00000307340 OR5I1Q13606 314 aa3.52□□□□□ -1.85
USH2A-201ENST00000307340 PMVKQ15126 192 aa3.52□□□□□ -1.85
USH2A-201ENST00000307340 HIKESHIQ53FT3 197 aa3.52□□□□□ -1.85
USH2A-201ENST00000307340 SLC23A3Q6PIS1 610 aa3.52□□□□□ -1.85
USH2A-201ENST00000307340 MS4A10Q96PG2 267 aa3.52□□□□□ -1.85
USH2A-201ENST00000307340 KIR2DL4Q99706 377 aa3.52□□□□□ -1.85
USH2A-201ENST00000307340 PTPRZ1P23471 2315 aaPredicted RBP3.52□□□□□ -1.85
USH2A-201ENST00000307340 A0A1W2PQM1 296 aa3.52□□□□□ -1.85
USH2A-201ENST00000307340 METAP1P53582 386 aa3.52□□□□□ -1.85
USH2A-201ENST00000307340 MYOZ3Q8TDC0 251 aa3.52□□□□□ -1.85
USH2A-201ENST00000307340 BADQ92934 168 aa3.52□□□□□ -1.85
USH2A-201ENST00000307340 SCNM1Q9BWG6 230 aa3.52□□□□□ -1.85
USH2A-201ENST00000307340 MOB4Q9Y3A3 225 aa3.52□□□□□ -1.85
USH2A-201ENST00000307340 A0A0B4J293 547 aa3.52□□□□□ -1.85
USH2A-201ENST00000307340 MYOD1P15172 320 aa3.52□□□□□ -1.85
USH2A-201ENST00000307340 PSMB5P28074 263 aa3.52□□□□□ -1.85
USH2A-201ENST00000307340 SMN1Q16637 294 aaKnown RBP3.52□□□□□ -1.85
USH2A-201ENST00000307340 PCGF1Q9BSM1 259 aa3.52□□□□□ -1.85
USH2A-201ENST00000307340 TPSD1Q9BZJ3 242 aa3.52□□□□□ -1.85
USH2A-201ENST00000307340 FAM171A2A8MVW0 826 aa3.52□□□□□ -1.85
USH2A-201ENST00000307340 C1QAP02745 245 aa3.52□□□□□ -1.85
USH2A-201ENST00000307340 FABP6P51161 128 aa3.52□□□□□ -1.85
USH2A-201ENST00000307340 TAS2R60P59551 318 aa3.52□□□□□ -1.85
USH2A-201ENST00000307340 ERVFRD-1P60508 538 aa3.52□□□□□ -1.85
USH2A-201ENST00000307340 PMS2P11Q13670 270 aa3.52□□□□□ -1.85
USH2A-201ENST00000307340 LINC00303Q3SY05 128 aa3.52□□□□□ -1.85
USH2A-201ENST00000307340 WNT2BQ93097 391 aa3.52□□□□□ -1.85
USH2A-201ENST00000307340 MIEN1Q9BRT3 115 aa3.52□□□□□ -1.85
USH2A-201ENST00000307340 GFRA4Q9GZZ7 299 aa3.52□□□□□ -1.85
USH2A-201ENST00000307340 CACNA1GO43497 2377 aa3.52□□□□□ -1.85
USH2A-201ENST00000307340 OR4C45A6NMZ5 311 aa3.52□□□□□ -1.85
USH2A-201ENST00000307340 PRR33A8MZF0 331 aa3.52□□□□□ -1.85
USH2A-201ENST00000307340 CD1BP29016 333 aa3.52□□□□□ -1.85
USH2A-201ENST00000307340 CTGFP29279 349 aa3.52□□□□□ -1.85
USH2A-201ENST00000307340 PPIAP62937 165 aaKnown RBP3.52□□□□□ -1.85
USH2A-201ENST00000307340 OR10G8Q8NGN5 311 aa3.52□□□□□ -1.85
USH2A-201ENST00000307340 PFN4Q8NHR9 129 aa3.52□□□□□ -1.85
USH2A-201ENST00000307340 RSG1Q9BU20 258 aa3.52□□□□□ -1.85
USH2A-201ENST00000307340 ZNF665Q9H7R5 613 aa3.52□□□□□ -1.85
USH2A-201ENST00000307340 TAS2R4Q9NYW5 299 aa3.52□□□□□ -1.85
USH2A-201ENST00000307340 DYSFO75923 2080 aa3.52□□□□□ -1.85
USH2A-201ENST00000307340 TRGV5A0A0B4J1U4 118 aa3.52□□□□□ -1.85
USH2A-201ENST00000307340 TMEM235A6NFC5 223 aa3.52□□□□□ -1.85
USH2A-201ENST00000307340 SH2D7A6NKC9 451 aaPredicted RBP3.52□□□□□ -1.85
USH2A-201ENST00000307340 CDX1P47902 265 aaPredicted RBP3.52□□□□□ -1.85
USH2A-201ENST00000307340 SPANXN5Q5MJ07 72 aa3.52□□□□□ -1.85
USH2A-201ENST00000307340 PNKDQ8N490 385 aa3.52□□□□□ -1.85
USH2A-201ENST00000307340 C9orf62Q8N4C0 152 aa3.52□□□□□ -1.85
Retrieved 100 of 20,778 RNA–protein pairs in 51.4 ms