RNA–Protein interactions for RNA: ENST00000541578.5

SNHG1-217, Transcript of small nucleolar RNA host gene 1, humanhuman

TSL 3 BASIC

Gene SNHG1, Length 588 nt, Biotype lincRNA, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNHG1-217ENST00000541578 TMEM158Q8WZ71 300 aa2.92□□□□□ -1.94
SNHG1-217ENST00000541578 YIPF5Q969M3 257 aa2.92□□□□□ -1.94
SNHG1-217ENST00000541578 BIRC8Q96P09 236 aa2.92□□□□□ -1.94
SNHG1-217ENST00000541578 TIMM17AQ99595 171 aa2.92□□□□□ -1.94
SNHG1-217ENST00000541578 HSD17B10Q99714 261 aaKnown RBP2.92□□□□□ -1.94
SNHG1-217ENST00000541578 ZNF717Q9BY31 904 aaPredicted RBP2.92□□□□□ -1.94
SNHG1-217ENST00000541578 BCL2L14Q9BZR8 327 aa2.92□□□□□ -1.94
SNHG1-217ENST00000541578 CXCL16Q9H2A7 254 aa2.92□□□□□ -1.94
SNHG1-217ENST00000541578 IFI27L2Q9H2X8 130 aa2.92□□□□□ -1.94
SNHG1-217ENST00000541578 WDR55Q9H6Y2 383 aaPredicted RBP2.92□□□□□ -1.94
SNHG1-217ENST00000541578 ASB8Q9H765 288 aa2.92□□□□□ -1.94
SNHG1-217ENST00000541578 ZNF442Q9H7R0 627 aa2.92□□□□□ -1.94
SNHG1-217ENST00000541578 PDFQ9HBH1 243 aa2.92□□□□□ -1.94
SNHG1-217ENST00000541578 DAZ3Q9NR90 486 aaKnown RBP2.92□□□□□ -1.94
SNHG1-217ENST00000541578 ACOT9Q9Y305 439 aa2.92□□□□□ -1.94
SNHG1-217ENST00000541578 PRELID3BQ9Y3B1 194 aa2.92□□□□□ -1.94
SNHG1-217ENST00000541578 OR51B2Q9Y5P1 312 aa2.92□□□□□ -1.94
SNHG1-217ENST00000541578 V9GYQ6 96 aa2.92□□□□□ -1.94
SNHG1-217ENST00000541578 RP1P56715 2156 aa2.92□□□□□ -1.94
SNHG1-217ENST00000541578 PLXNA2O75051 1894 aa2.92□□□□□ -1.94
SNHG1-217ENST00000541578 NIPBLQ6KC79 2804 aaeCLIP2.92□□□□□ -1.948e-27■■■■□ 21.5
SNHG1-217ENST00000541578 TRPM6Q9BX84 2022 aa2.92□□□□□ -1.94
SNHG1-217ENST00000541578 NBASA2RRP1 2371 aa2.92□□□□□ -1.94
SNHG1-217ENST00000541578 IGHV3OR16-9A0A0B4J2B5 98 aa2.91□□□□□ -1.94
SNHG1-217ENST00000541578 IGHV1-69DA0A0B4J2H0 117 aa2.91□□□□□ -1.94
SNHG1-217ENST00000541578 ANKRD20A5PA0PJZ0 165 aa2.91□□□□□ -1.94
SNHG1-217ENST00000541578 PLAC8L1A1L4L8 177 aa2.91□□□□□ -1.94
SNHG1-217ENST00000541578 TVP23AA6NH52 213 aa2.91□□□□□ -1.94
SNHG1-217ENST00000541578 KLLNB2CW77 178 aa2.91□□□□□ -1.94
SNHG1-217ENST00000541578 PRAMEF26H0Y7S4 382 aa2.91□□□□□ -1.94
SNHG1-217ENST00000541578 SLC16A4O15374 487 aa2.91□□□□□ -1.94
SNHG1-217ENST00000541578 TRAF3IP2O43734 574 aaPredicted RBP2.91□□□□□ -1.94
SNHG1-217ENST00000541578 SLC37A4O43826 429 aa2.91□□□□□ -1.94
SNHG1-217ENST00000541578 RAD1O60671 282 aa2.91□□□□□ -1.94
SNHG1-217ENST00000541578 CCDC22O60826 627 aa2.91□□□□□ -1.94
SNHG1-217ENST00000541578 SS18L1O75177 396 aaPredicted RBP2.91□□□□□ -1.94
SNHG1-217ENST00000541578 NDUFS6O75380 124 aaKnown RBP2.91□□□□□ -1.94
SNHG1-217ENST00000541578 GLSO94925 669 aaPredicted RBP2.91□□□□□ -1.94
SNHG1-217ENST00000541578 TNFSF15O95150 251 aa2.91□□□□□ -1.94
SNHG1-217ENST00000541578 OR4E1P0C645 316 aa2.91□□□□□ -1.94
SNHG1-217ENST00000541578 SLC35G6P0C7Q6 338 aa2.91□□□□□ -1.94
SNHG1-217ENST00000541578 OCM2P0CE71 109 aa2.91□□□□□ -1.94
SNHG1-217ENST00000541578 OCMP0CE72 109 aaPredicted RBP2.91□□□□□ -1.94
SNHG1-217ENST00000541578 CXCL8P10145 99 aa2.91□□□□□ -1.94
SNHG1-217ENST00000541578 COX5BP10606 129 aa2.91□□□□□ -1.94
SNHG1-217ENST00000541578 LIPCP11150 499 aa2.91□□□□□ -1.94
SNHG1-217ENST00000541578 NQO1P15559 274 aaKnown RBP2.91□□□□□ -1.94
SNHG1-217ENST00000541578 CBR1P16152 277 aa2.91□□□□□ -1.94
SNHG1-217ENST00000541578 S100PP25815 95 aa2.91□□□□□ -1.94
SNHG1-217ENST00000541578 GTF2H1P32780 548 aa2.91□□□□□ -1.94
SNHG1-217ENST00000541578 SSTR5P35346 364 aa2.91□□□□□ -1.94
SNHG1-217ENST00000541578 CD79BP40259 229 aa2.91□□□□□ -1.94
SNHG1-217ENST00000541578 KCNJ3P48549 501 aa2.91□□□□□ -1.94
SNHG1-217ENST00000541578 RGS6P49758 472 aa2.91□□□□□ -1.94
SNHG1-217ENST00000541578 KRTAP12-2P59991 146 aa2.91□□□□□ -1.94
SNHG1-217ENST00000541578 RPL26P61254 145 aaKnown RBP2.91□□□□□ -1.94
SNHG1-217ENST00000541578 NAA20P61599 178 aa2.91□□□□□ -1.94
SNHG1-217ENST00000541578 RAP1AP62834 184 aa2.91□□□□□ -1.94
SNHG1-217ENST00000541578 CACNG7P62955 275 aa2.91□□□□□ -1.94
SNHG1-217ENST00000541578 SKP1P63208 163 aa2.91□□□□□ -1.94
SNHG1-217ENST00000541578 SLC35A1P78382 337 aa2.91□□□□□ -1.94
SNHG1-217ENST00000541578 FLI1Q01543 452 aaPredicted RBP2.91□□□□□ -1.94
SNHG1-217ENST00000541578 IFITM3Q01628 133 aa2.91□□□□□ -1.94
SNHG1-217ENST00000541578 RPL18AQ02543 176 aaKnown RBP2.91□□□□□ -1.94
SNHG1-217ENST00000541578 STX5Q13190 355 aa2.91□□□□□ -1.94
SNHG1-217ENST00000541578 SMCO1Q147U7 214 aa2.91□□□□□ -1.94
SNHG1-217ENST00000541578 PSG3Q16557 428 aa2.91□□□□□ -1.94
SNHG1-217ENST00000541578 SNRNP35Q16560 246 aaKnown RBP2.91□□□□□ -1.94
SNHG1-217ENST00000541578 TNFAIP8L3Q5GJ75 292 aa2.91□□□□□ -1.94
SNHG1-217ENST00000541578 RESP18Q5W5W9 173 aa2.91□□□□□ -1.94
SNHG1-217ENST00000541578 DNAJC24Q6P3W2 148 aa2.91□□□□□ -1.94
SNHG1-217ENST00000541578 C5orf46Q6UWT4 87 aa2.91□□□□□ -1.94
SNHG1-217ENST00000541578 TMEM25Q86YD3 366 aa2.91□□□□□ -1.94
SNHG1-217ENST00000541578 OR10W1Q8NGF6 305 aa2.91□□□□□ -1.94
SNHG1-217ENST00000541578 OR8J2Q8NGG1 315 aa2.91□□□□□ -1.94
SNHG1-217ENST00000541578 OR4C6Q8NH72 309 aa2.91□□□□□ -1.94
SNHG1-217ENST00000541578 OR1S1Q8NH92 325 aa2.91□□□□□ -1.94
SNHG1-217ENST00000541578 RNASE11Q8TAA1 199 aaKnown RBP2.91□□□□□ -1.94
SNHG1-217ENST00000541578 TMEM234Q8WY98 164 aa2.91□□□□□ -1.94
SNHG1-217ENST00000541578 BORCS5Q969J3 196 aa2.91□□□□□ -1.94
SNHG1-217ENST00000541578 CPNE4Q96A23 557 aaPredicted RBP2.91□□□□□ -1.94
SNHG1-217ENST00000541578 MRGPRFQ96AM1 343 aa2.91□□□□□ -1.94
SNHG1-217ENST00000541578 Q96MT0 163 aa2.91□□□□□ -1.94
SNHG1-217ENST00000541578 TEAD3Q99594 435 aa2.91□□□□□ -1.94
SNHG1-217ENST00000541578 SEC22CQ9BRL7 303 aa2.91□□□□□ -1.94
SNHG1-217ENST00000541578 TIMM29Q9BSF4 260 aa2.91□□□□□ -1.94
SNHG1-217ENST00000541578 OSBPL11Q9BXB4 747 aa2.91□□□□□ -1.94
SNHG1-217ENST00000541578 SLC19A3Q9BZV2 496 aa2.91□□□□□ -1.94
SNHG1-217ENST00000541578 DERL2Q9GZP9 239 aa2.91□□□□□ -1.94
SNHG1-217ENST00000541578 ALX4Q9H161 411 aaPredicted RBP2.91□□□□□ -1.94
SNHG1-217ENST00000541578 ASCL3Q9NQ33 180 aa2.91□□□□□ -1.94
SNHG1-217ENST00000541578 NKIRAS1Q9NYS0 192 aa2.91□□□□□ -1.94
SNHG1-217ENST00000541578 TAS2R1Q9NYW7 299 aa2.91□□□□□ -1.94
SNHG1-217ENST00000541578 ARL2BPQ9Y2Y0 163 aa2.91□□□□□ -1.94
SNHG1-217ENST00000541578 SETD2Q9BYW2 2564 aaPredicted RBP2.91□□□□□ -1.94
SNHG1-217ENST00000541578 PTPRJQ12913 1337 aa2.91□□□□□ -1.94
SNHG1-217ENST00000541578 NAV3Q8IVL0 2385 aa2.9□□□□□ -1.94
SNHG1-217ENST00000541578 TLN1Q9Y490 2541 aaKnown RBP2.9□□□□□ -1.94
SNHG1-217ENST00000541578 NBPF19A0A087WUL8 3843 aa2.9□□□□□ -1.94
SNHG1-217ENST00000541578 SCN2AQ99250 2005 aa2.9□□□□□ -1.94
Retrieved 100 of 20,778 RNA–protein pairs in 60.5 ms