RNA–Protein interactions for RNA: ENST00000535399.1

SFSWAP-204, Transcript of splicing factor SWAP, humanhuman

TSL 2

Gene SFSWAP, Length 778 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SFSWAP-204ENST00000535399 TMEM272A0A1B0GTI8 110 aa18.43■□□□□ 0.54
SFSWAP-204ENST00000535399 A0A1B0GX30 115 aa18.43■□□□□ 0.54
SFSWAP-204ENST00000535399 UBE2QL1A1L167 161 aa18.43■□□□□ 0.54
SFSWAP-204ENST00000535399 SMIM30A4D0T7 59 aa18.43■□□□□ 0.54
SFSWAP-204ENST00000535399 AIPO00170 330 aa18.43■□□□□ 0.54
SFSWAP-204ENST00000535399 CA11O75493 328 aa18.43■□□□□ 0.54
SFSWAP-204ENST00000535399 GZMHP20718 246 aa18.43■□□□□ 0.54
SFSWAP-204ENST00000535399 PAX6P26367 422 aa18.43■□□□□ 0.54
SFSWAP-204ENST00000535399 SSTR5P35346 364 aa18.43■□□□□ 0.54
SFSWAP-204ENST00000535399 PLA2G7Q13093 441 aa18.43■□□□□ 0.54
SFSWAP-204ENST00000535399 DYNC1I2Q13409 638 aaKnown RBP18.43■□□□□ 0.54
SFSWAP-204ENST00000535399 NKAPLQ5M9Q1 402 aa18.43■□□□□ 0.54
SFSWAP-204ENST00000535399 UTF1Q5T230 341 aa18.43■□□□□ 0.54
SFSWAP-204ENST00000535399 C16orf87Q6PH81 154 aa18.43■□□□□ 0.54
SFSWAP-204ENST00000535399 ABHD12Q8N2K0 398 aa18.43■□□□□ 0.54
SFSWAP-204ENST00000535399 CCDC107Q8WV48 283 aa18.43■□□□□ 0.54
SFSWAP-204ENST00000535399 YIPF6Q96EC8 236 aa18.43■□□□□ 0.54
SFSWAP-204ENST00000535399 KCTD7Q96MP8 289 aa18.43■□□□□ 0.54
SFSWAP-204ENST00000535399 NEDD4LQ96PU5 975 aa18.43■□□□□ 0.54
SFSWAP-204ENST00000535399 SULT4A1Q9BR01 284 aa18.43■□□□□ 0.54
SFSWAP-204ENST00000535399 URM1Q9BTM9 101 aaKnown RBP18.43■□□□□ 0.54
SFSWAP-204ENST00000535399 CHIAQ9BZP6 476 aa18.43■□□□□ 0.54
SFSWAP-204ENST00000535399 RNF167Q9H6Y7 350 aa18.43■□□□□ 0.54
SFSWAP-204ENST00000535399 IDI2-AS1Q9NZ38 188 aa18.43■□□□□ 0.54
SFSWAP-204ENST00000535399 TBL2Q9Y4P3 447 aaKnown RBP18.43■□□□□ 0.54
SFSWAP-204ENST00000535399 STAB1Q9NY15 2570 aa18.43■□□□□ 0.54
SFSWAP-204ENST00000535399 LOC100506127A0A0U1RQW1 187 aa18.42■□□□□ 0.54
SFSWAP-204ENST00000535399 FAM172BPA6NC97 362 aa18.42■□□□□ 0.54
SFSWAP-204ENST00000535399 C15orf65H3BRN8 121 aa18.42■□□□□ 0.54
SFSWAP-204ENST00000535399 SMIM18P0DKX4 95 aa18.42■□□□□ 0.54
SFSWAP-204ENST00000535399 C6orf201Q7Z4U5 140 aa18.42■□□□□ 0.54
SFSWAP-204ENST00000535399 RTN4RL2Q86UN3 420 aa18.42■□□□□ 0.54
SFSWAP-204ENST00000535399 TPRA1Q86W33 373 aa18.42■□□□□ 0.54
SFSWAP-204ENST00000535399 RFESDQ8TAC1 157 aa18.42■□□□□ 0.54
SFSWAP-204ENST00000535399 CENPOQ9BU64 300 aa18.42■□□□□ 0.54
SFSWAP-204ENST00000535399 DPAGT1Q9H3H5 408 aa18.42■□□□□ 0.54
SFSWAP-204ENST00000535399 ZNF286AQ9HBT8 521 aa18.42■□□□□ 0.54
SFSWAP-204ENST00000535399 A0A0B4J203 849 aa18.41■□□□□ 0.54
SFSWAP-204ENST00000535399 FOXI3A8MTJ6 420 aaPredicted RBP18.41■□□□□ 0.54
SFSWAP-204ENST00000535399 NOTOA8MTQ0 251 aa18.41■□□□□ 0.54
SFSWAP-204ENST00000535399 SOCS1O15524 211 aa18.41■□□□□ 0.54
SFSWAP-204ENST00000535399 NFYBP25208 207 aa18.41■□□□□ 0.54
SFSWAP-204ENST00000535399 BLVRBP30043 206 aaPredicted RBP18.41■□□□□ 0.54
SFSWAP-204ENST00000535399 SDC2P34741 201 aa18.41■□□□□ 0.54
SFSWAP-204ENST00000535399 MINOS1Q5TGZ0 78 aa18.41■□□□□ 0.54
SFSWAP-204ENST00000535399 DYNAPQ8N1N2 210 aa18.41■□□□□ 0.54
SFSWAP-204ENST00000535399 OR4P4Q8NGL7 312 aa18.41■□□□□ 0.54
SFSWAP-204ENST00000535399 OR4K15Q8NH41 348 aa18.41■□□□□ 0.54
SFSWAP-204ENST00000535399 FAAP24Q9BTP7 215 aa18.41■□□□□ 0.54
SFSWAP-204ENST00000535399 MINOS1-NBL1R4GNA1 71 aa18.41■□□□□ 0.54
SFSWAP-204ENST00000535399 ORC5O43913 435 aa18.4■□□□□ 0.54
SFSWAP-204ENST00000535399 IGLV1-47P01700 117 aa18.4■□□□□ 0.54
SFSWAP-204ENST00000535399 SLC2A2P11168 524 aaPredicted RBP18.4■□□□□ 0.54
SFSWAP-204ENST00000535399 ACTG1P63261 375 aa18.4■□□□□ 0.54
SFSWAP-204ENST00000535399 LTC4SQ16873 150 aa18.4■□□□□ 0.54
SFSWAP-204ENST00000535399 OR10A7Q8NGE5 316 aa18.4■□□□□ 0.54
SFSWAP-204ENST00000535399 SPATA3Q8NHX4 192 aa18.4■□□□□ 0.54
SFSWAP-204ENST00000535399 MRPL30Q8TCC3 161 aaKnown RBP18.4■□□□□ 0.54
SFSWAP-204ENST00000535399 ARL11Q969Q4 196 aa18.4■□□□□ 0.54
SFSWAP-204ENST00000535399 MALSU1Q96EH3 234 aa18.4■□□□□ 0.54
SFSWAP-204ENST00000535399 LIN7BQ9HAP6 207 aa18.4■□□□□ 0.54
SFSWAP-204ENST00000535399 RAB22AQ9UL26 194 aa18.4■□□□□ 0.54
SFSWAP-204ENST00000535399 TRAPPC2LQ9UL33 140 aa18.4■□□□□ 0.54
SFSWAP-204ENST00000535399 TMEM89A2RUT3 159 aa18.39■□□□□ 0.53
SFSWAP-204ENST00000535399 CLEC2LP0C7M8 214 aa18.39■□□□□ 0.53
SFSWAP-204ENST00000535399 EFNB2P52799 333 aa18.39■□□□□ 0.53
SFSWAP-204ENST00000535399 TMEM50BP56557 158 aa18.39■□□□□ 0.53
SFSWAP-204ENST00000535399 AANATQ16613 207 aa18.39■□□□□ 0.53
SFSWAP-204ENST00000535399 GDPGP1Q6ZNW5 385 aa18.39■□□□□ 0.53
SFSWAP-204ENST00000535399 UBALD1Q8TB05 177 aa18.39■□□□□ 0.53
SFSWAP-204ENST00000535399 SSX3Q99909 188 aa18.39■□□□□ 0.53
SFSWAP-204ENST00000535399 MBNL3Q9NUK0 354 aaKnown RBP18.39■□□□□ 0.53
SFSWAP-204ENST00000535399 C12orf77C9JDV5 145 aa18.38■□□□□ 0.53
SFSWAP-204ENST00000535399 HKR1P10072 659 aa18.38■□□□□ 0.53
SFSWAP-204ENST00000535399 RCC1P18754 421 aaPredicted RBP18.38■□□□□ 0.53
SFSWAP-204ENST00000535399 VEGFCP49767 419 aa18.38■□□□□ 0.53
SFSWAP-204ENST00000535399 LRRC75BQ2VPJ9 315 aa18.38■□□□□ 0.53
SFSWAP-204ENST00000535399 TIMM50Q3ZCQ8 353 aa18.38■□□□□ 0.53
SFSWAP-204ENST00000535399 OR5R1Q8NH85 324 aa18.38■□□□□ 0.53
SFSWAP-204ENST00000535399 NDNFQ8TB73 568 aa18.38■□□□□ 0.53
SFSWAP-204ENST00000535399 ZNF596Q8TC21 504 aa18.38■□□□□ 0.53
SFSWAP-204ENST00000535399 LEAP2Q969E1 77 aa18.38■□□□□ 0.53
SFSWAP-204ENST00000535399 PLEKHJ1Q9NW61 149 aa18.38■□□□□ 0.53
SFSWAP-204ENST00000535399 FAM181BA6NEQ2 426 aa18.37■□□□□ 0.53
SFSWAP-204ENST00000535399 VGLL3A8MV65 326 aa18.37■□□□□ 0.53
SFSWAP-204ENST00000535399 H3BUX3 64 aa18.37■□□□□ 0.53
SFSWAP-204ENST00000535399 RAB6AP20340 208 aa18.37■□□□□ 0.53
SFSWAP-204ENST00000535399 HTR1DP28221 377 aa18.37■□□□□ 0.53
SFSWAP-204ENST00000535399 SSX2Q16385 188 aa18.37■□□□□ 0.53
SFSWAP-204ENST00000535399 C6orf183Q5T699 404 aa18.37■□□□□ 0.53
SFSWAP-204ENST00000535399 SFXN4Q6P4A7 337 aa18.37■□□□□ 0.53
SFSWAP-204ENST00000535399 OR9G1Q8NH87 305 aa18.37■□□□□ 0.53
SFSWAP-204ENST00000535399 PIFOQ8TCI5 191 aa18.37■□□□□ 0.53
SFSWAP-204ENST00000535399 TAF15Q92804 592 aaKnown RBP eCLIP18.37■□□□□ 0.53
SFSWAP-204ENST00000535399 GCDHQ92947 438 aaPredicted RBP18.37■□□□□ 0.53
SFSWAP-204ENST00000535399 DPM3Q9P2X0 92 aa18.37■□□□□ 0.53
SFSWAP-204ENST00000535399 VPREB3Q9UKI3 123 aa18.37■□□□□ 0.53
SFSWAP-204ENST00000535399 HSF4Q9ULV5 492 aa18.37■□□□□ 0.53
SFSWAP-204ENST00000535399 BTBD17A6NE02 478 aa18.36■□□□□ 0.53
SFSWAP-204ENST00000535399 F2RL2O00254 374 aa18.36■□□□□ 0.53
Retrieved 100 of 20,778 RNA–protein pairs in 77.3 ms