RNA–Protein interactions for RNA: ENST00000483956.1

SEC61A1-205, Transcript of Sec61 translocon alpha 1 subunit, humanhuman

TSL 1 (best)

Gene SEC61A1, Length 3,046 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC61A1-205ENST00000483956 MAP1LC3BQ9GZQ8 125 aa10□□□□□ -0.81
SEC61A1-205ENST00000483956 ELL3Q9HB65 397 aaPredicted RBP10□□□□□ -0.81
SEC61A1-205ENST00000483956 Q9N2K0 584 aa10□□□□□ -0.81
SEC61A1-205ENST00000483956 TMEM9BQ9NQ34 198 aa10□□□□□ -0.81
SEC61A1-205ENST00000483956 CRYM-AS1A6NIL9 109 aa9.99□□□□□ -0.81
SEC61A1-205ENST00000483956 HBE1P02100 147 aa9.99□□□□□ -0.81
SEC61A1-205ENST00000483956 BCL2P10415 239 aa9.99□□□□□ -0.81
SEC61A1-205ENST00000483956 FGF8P55075 233 aaPredicted RBP9.99□□□□□ -0.81
SEC61A1-205ENST00000483956 ARL6IP1Q15041 203 aa9.99□□□□□ -0.81
SEC61A1-205ENST00000483956 TSPO2Q5TGU0 170 aa9.99□□□□□ -0.81
SEC61A1-205ENST00000483956 LHFPL4Q7Z7J7 247 aa9.99□□□□□ -0.81
SEC61A1-205ENST00000483956 COMMD2Q86X83 199 aa9.99□□□□□ -0.81
SEC61A1-205ENST00000483956 EMC6Q9BV81 110 aa9.99□□□□□ -0.81
SEC61A1-205ENST00000483956 PLA2G3Q9NZ20 509 aa9.99□□□□□ -0.81
SEC61A1-205ENST00000483956 COX11Q9Y6N1 276 aa9.99□□□□□ -0.81
SEC61A1-205ENST00000483956 PCDH15Q96QU1 1955 aa9.99□□□□□ -0.81
SEC61A1-205ENST00000483956 ADAMTS9Q9P2N4 1935 aa9.99□□□□□ -0.81
SEC61A1-205ENST00000483956 IGHV2-70DA0A0C4DH43 119 aa9.99□□□□□ -0.81
SEC61A1-205ENST00000483956 IGKV1-9A0A0C4DH69 117 aa9.99□□□□□ -0.81
SEC61A1-205ENST00000483956 A0A1W2PPC4 97 aa9.99□□□□□ -0.81
SEC61A1-205ENST00000483956 F6UZH7 168 aa9.99□□□□□ -0.81
SEC61A1-205ENST00000483956 HPNP05981 417 aa9.99□□□□□ -0.81
SEC61A1-205ENST00000483956 ZNF709Q8N972 641 aa9.99□□□□□ -0.81
SEC61A1-205ENST00000483956 ZNF738Q8NE65 137 aa9.99□□□□□ -0.81
SEC61A1-205ENST00000483956 GPER1Q99527 375 aa9.99□□□□□ -0.81
SEC61A1-205ENST00000483956 PNRC2Q9NPJ4 139 aaKnown RBP9.99□□□□□ -0.81
SEC61A1-205ENST00000483956 CISD1Q9NZ45 108 aaKnown RBP9.99□□□□□ -0.81
SEC61A1-205ENST00000483956 LAMTOR2Q9Y2Q5 125 aa9.99□□□□□ -0.81
SEC61A1-205ENST00000483956 POLR1DQ9Y2S0 133 aa9.99□□□□□ -0.81
SEC61A1-205ENST00000483956 RBM7Q9Y580 266 aaKnown RBP9.99□□□□□ -0.81
SEC61A1-205ENST00000483956 SEC16AO15027 2179 aa9.99□□□□□ -0.81
SEC61A1-205ENST00000483956 VSTM2BA6NLU5 285 aa9.99□□□□□ -0.81
SEC61A1-205ENST00000483956 TNFSF12O43508 249 aa9.99□□□□□ -0.81
SEC61A1-205ENST00000483956 UBE2G2P60604 165 aa9.99□□□□□ -0.81
SEC61A1-205ENST00000483956 CRIP3Q6Q6R5 217 aa9.99□□□□□ -0.81
SEC61A1-205ENST00000483956 OR2C3Q8N628 320 aa9.99□□□□□ -0.81
SEC61A1-205ENST00000483956 OR51T1Q8NGJ9 327 aa9.99□□□□□ -0.81
SEC61A1-205ENST00000483956 TM2D1Q9BX74 207 aa9.99□□□□□ -0.81
SEC61A1-205ENST00000483956 PECRQ9BY49 303 aa9.99□□□□□ -0.81
SEC61A1-205ENST00000483956 DECR2Q9NUI1 292 aa9.99□□□□□ -0.81
SEC61A1-205ENST00000483956 PRSS50Q9UI38 385 aa9.99□□□□□ -0.81
SEC61A1-205ENST00000483956 IGKV1D-8A0A087WSZ0 117 aa9.98□□□□□ -0.81
SEC61A1-205ENST00000483956 TRAV34A0A0B4J273 112 aa9.98□□□□□ -0.81
SEC61A1-205ENST00000483956 GALR2O43603 387 aaPredicted RBP9.98□□□□□ -0.81
SEC61A1-205ENST00000483956 ONECUT2O95948 504 aa9.98□□□□□ -0.81
SEC61A1-205ENST00000483956 HRASP01112 189 aa9.98□□□□□ -0.81
SEC61A1-205ENST00000483956 IGHG1P01857 330 aa9.98□□□□□ -0.81
SEC61A1-205ENST00000483956 CTSDP07339 412 aaPredicted RBP9.98□□□□□ -0.81
SEC61A1-205ENST00000483956 CLRN1P58418 232 aa9.98□□□□□ -0.81
SEC61A1-205ENST00000483956 TLE1Q04724 770 aa9.98□□□□□ -0.81
SEC61A1-205ENST00000483956 FAM71F1Q96KD3 344 aaPredicted RBP9.98□□□□□ -0.81
SEC61A1-205ENST00000483956 SPEGQ15772 3267 aa9.98□□□□□ -0.81
SEC61A1-205ENST00000483956 PITX3O75364 302 aa9.98□□□□□ -0.81
SEC61A1-205ENST00000483956 OCIAD2Q56VL3 154 aa9.98□□□□□ -0.81
SEC61A1-205ENST00000483956 SLC25A53Q5H9E4 307 aa9.98□□□□□ -0.81
SEC61A1-205ENST00000483956 SLC25A47Q6Q0C1 308 aa9.98□□□□□ -0.81
SEC61A1-205ENST00000483956 H1FOOQ8IZA3 346 aaPredicted RBP9.98□□□□□ -0.81
SEC61A1-205ENST00000483956 LGI3Q8N145 548 aa9.98□□□□□ -0.81
SEC61A1-205ENST00000483956 TMEM217Q8N7C4 229 aa9.98□□□□□ -0.81
SEC61A1-205ENST00000483956 OR5C1Q8NGR4 320 aa9.98□□□□□ -0.81
SEC61A1-205ENST00000483956 OR2T10Q8NGZ9 312 aa9.98□□□□□ -0.81
SEC61A1-205ENST00000483956 OR1L3Q8NH93 324 aa9.98□□□□□ -0.81
SEC61A1-205ENST00000483956 CMTM2Q8TAZ6 248 aa9.98□□□□□ -0.81
SEC61A1-205ENST00000483956 RNF138Q8WVD3 245 aa9.98□□□□□ -0.81
SEC61A1-205ENST00000483956 APH1AQ96BI3 265 aa9.98□□□□□ -0.81
SEC61A1-205ENST00000483956 SMIM7Q9BQ49 75 aa9.98□□□□□ -0.81
SEC61A1-205ENST00000483956 CEBPZOSA8MTT3 80 aa9.97□□□□□ -0.81
SEC61A1-205ENST00000483956 CST7O76096 145 aa9.97□□□□□ -0.81
SEC61A1-205ENST00000483956 ZNF205O95201 554 aa9.97□□□□□ -0.81
SEC61A1-205ENST00000483956 IGLV3-1P01715 115 aa9.97□□□□□ -0.81
SEC61A1-205ENST00000483956 ANOS1P23352 680 aa9.97□□□□□ -0.81
SEC61A1-205ENST00000483956 BLVRBP30043 206 aaPredicted RBP9.97□□□□□ -0.81
SEC61A1-205ENST00000483956 PIGPP57054 158 aa9.97□□□□□ -0.81
SEC61A1-205ENST00000483956 HYAL1Q12794 435 aa9.97□□□□□ -0.81
SEC61A1-205ENST00000483956 PRDX4Q13162 271 aa9.97□□□□□ -0.81
SEC61A1-205ENST00000483956 GNMTQ14749 295 aa9.97□□□□□ -0.81
SEC61A1-205ENST00000483956 KISS1Q15726 138 aa9.97□□□□□ -0.81
SEC61A1-205ENST00000483956 BSXQ3C1V8 233 aa9.97□□□□□ -0.81
SEC61A1-205ENST00000483956 LCN15Q6UWW0 184 aa9.97□□□□□ -0.81
SEC61A1-205ENST00000483956 UEVLDQ8IX04 471 aa9.97□□□□□ -0.81
SEC61A1-205ENST00000483956 IMMP2LQ96T52 175 aa9.97□□□□□ -0.81
SEC61A1-205ENST00000483956 HSPB9Q9BQS6 159 aa9.97□□□□□ -0.81
SEC61A1-205ENST00000483956 MANBALQ9NQG1 85 aa9.97□□□□□ -0.81
SEC61A1-205ENST00000483956 LRRC3CA6NJW4 275 aa9.97□□□□□ -0.81
SEC61A1-205ENST00000483956 TCN2P20062 427 aa9.97□□□□□ -0.81
SEC61A1-205ENST00000483956 CTSSP25774 331 aa9.97□□□□□ -0.81
SEC61A1-205ENST00000483956 DUSP1P28562 367 aa9.97□□□□□ -0.81
SEC61A1-205ENST00000483956 HINT1P49773 126 aaPredicted RBP9.97□□□□□ -0.81
SEC61A1-205ENST00000483956 FBXW4P57775 412 aa9.97□□□□□ -0.81
SEC61A1-205ENST00000483956 GRB2P62993 217 aaKnown RBP9.97□□□□□ -0.81
SEC61A1-205ENST00000483956 TMEM187Q14656 261 aa9.97□□□□□ -0.81
SEC61A1-205ENST00000483956 SAXO1Q8IYX7 474 aa9.97□□□□□ -0.81
SEC61A1-205ENST00000483956 CISD2Q8N5K1 135 aaKnown RBP9.97□□□□□ -0.81
SEC61A1-205ENST00000483956 SUMF1Q8NBK3 374 aa9.97□□□□□ -0.81
SEC61A1-205ENST00000483956 KCNE4Q8WWG9 221 aa9.97□□□□□ -0.81
SEC61A1-205ENST00000483956 LOXL4Q96JB6 756 aa9.97□□□□□ -0.81
SEC61A1-205ENST00000483956 NUDT22Q9BRQ3 303 aa9.97□□□□□ -0.81
SEC61A1-205ENST00000483956 CST9LQ9H4G1 147 aa9.97□□□□□ -0.81
SEC61A1-205ENST00000483956 NAT8Q9UHE5 227 aa9.97□□□□□ -0.81
SEC61A1-205ENST00000483956 SH3BGRL2Q9UJC5 107 aa9.97□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 149.3 ms