RNA–Protein interactions for RNA: ENST00000476169.1

VPS13D-207, Transcript of vacuolar protein sorting 13 homolog D, humanhuman

TSL 3

Gene VPS13D, Length 475 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13D-207ENST00000476169 OR4C13Q8NGP0 309 aa2.96□□□□□ -1.94
VPS13D-207ENST00000476169 COQ8AQ8NI60 647 aa2.96□□□□□ -1.94
VPS13D-207ENST00000476169 C16orf78Q8WTQ4 265 aa2.96□□□□□ -1.94
VPS13D-207ENST00000476169 ASB13Q8WXK3 278 aa2.96□□□□□ -1.94
VPS13D-207ENST00000476169 GGTLC1Q9BX51 225 aa2.96□□□□□ -1.94
VPS13D-207ENST00000476169 MROQ9BYG7 248 aa2.96□□□□□ -1.94
VPS13D-207ENST00000476169 TBL1XR1Q9BZK7 514 aa2.96□□□□□ -1.94
VPS13D-207ENST00000476169 ULBP1Q9BZM6 244 aa2.96□□□□□ -1.94
VPS13D-207ENST00000476169 CENPHQ9H3R5 247 aa2.96□□□□□ -1.94
VPS13D-207ENST00000476169 NANOGQ9H9S0 305 aa2.96□□□□□ -1.94
VPS13D-207ENST00000476169 NOX3Q9HBY0 568 aa2.96□□□□□ -1.94
VPS13D-207ENST00000476169 CTNNBIP1Q9NSA3 81 aaPredicted RBP2.96□□□□□ -1.94
VPS13D-207ENST00000476169 STOML2Q9UJZ1 356 aa2.96□□□□□ -1.94
VPS13D-207ENST00000476169 ARL2BPQ9Y2Y0 163 aa2.96□□□□□ -1.94
VPS13D-207ENST00000476169 ZNF780BQ9Y6R6 833 aa2.96□□□□□ -1.94
VPS13D-207ENST00000476169 KIF24Q5T7B8 1368 aa2.96□□□□□ -1.94
VPS13D-207ENST00000476169 QRICH2Q9H0J4 1663 aa2.95□□□□□ -1.94
VPS13D-207ENST00000476169 PHRF1Q9P1Y6 1649 aaKnown RBP2.95□□□□□ -1.94
VPS13D-207ENST00000476169 IGLV11-55A0A075B6I3 123 aa2.95□□□□□ -1.94
VPS13D-207ENST00000476169 TGIF2-C20orf24A0A0A6YYL0 155 aa2.95□□□□□ -1.94
VPS13D-207ENST00000476169 MFNGO00587 321 aa2.95□□□□□ -1.94
VPS13D-207ENST00000476169 BCL2L11O43521 198 aa2.95□□□□□ -1.94
VPS13D-207ENST00000476169 EIF1BO60739 113 aaKnown RBP2.95□□□□□ -1.94
VPS13D-207ENST00000476169 FOXH1O75593 365 aa2.95□□□□□ -1.94
VPS13D-207ENST00000476169 SERPINA1P01009 418 aa2.95□□□□□ -1.94
VPS13D-207ENST00000476169 OR4Q2P0C623 313 aa2.95□□□□□ -1.94
VPS13D-207ENST00000476169 IL3RAP26951 378 aa2.95□□□□□ -1.94
VPS13D-207ENST00000476169 EIF1P41567 113 aaKnown RBP2.95□□□□□ -1.94
VPS13D-207ENST00000476169 GNG10P50151 68 aa2.95□□□□□ -1.94
VPS13D-207ENST00000476169 ARF6P62330 175 aa2.95□□□□□ -1.94
VPS13D-207ENST00000476169 GTF2BQ00403 316 aa2.95□□□□□ -1.94
VPS13D-207ENST00000476169 PDK2Q15119 407 aa2.95□□□□□ -1.94
VPS13D-207ENST00000476169 FBXL19-AS1Q494R0 122 aa2.95□□□□□ -1.94
VPS13D-207ENST00000476169 ZNF404Q494X3 552 aa2.95□□□□□ -1.94
VPS13D-207ENST00000476169 FAM162BQ5T6X4 162 aa2.95□□□□□ -1.94
VPS13D-207ENST00000476169 TSPO2Q5TGU0 170 aa2.95□□□□□ -1.94
VPS13D-207ENST00000476169 FBXL22Q6P050 247 aa2.95□□□□□ -1.94
VPS13D-207ENST00000476169 PRNTQ86SH4 94 aa2.95□□□□□ -1.94
VPS13D-207ENST00000476169 LINC00596Q86U02 117 aa2.95□□□□□ -1.94
VPS13D-207ENST00000476169 GID4Q8IVV7 300 aa2.95□□□□□ -1.94
VPS13D-207ENST00000476169 C11orf53Q8IXP5 236 aa2.95□□□□□ -1.94
VPS13D-207ENST00000476169 MFSD8Q8NHS3 518 aa2.95□□□□□ -1.94
VPS13D-207ENST00000476169 PHOSPHO2Q8TCD6 241 aa2.95□□□□□ -1.94
VPS13D-207ENST00000476169 HAVCR2Q8TDQ0 301 aa2.95□□□□□ -1.94
VPS13D-207ENST00000476169 SLC37A2Q8TED4 501 aa2.95□□□□□ -1.94
VPS13D-207ENST00000476169 ORAOV1Q8WV07 137 aa2.95□□□□□ -1.94
VPS13D-207ENST00000476169 FXYD5Q96DB9 178 aa2.95□□□□□ -1.94
VPS13D-207ENST00000476169 ZNF382Q96SR6 550 aa2.95□□□□□ -1.94
VPS13D-207ENST00000476169 DOK1Q99704 481 aa2.95□□□□□ -1.94
VPS13D-207ENST00000476169 EBNA1BP2Q99848 306 aaKnown RBP2.95□□□□□ -1.94
VPS13D-207ENST00000476169 CHAC1Q9BUX1 264 aa2.95□□□□□ -1.94
VPS13D-207ENST00000476169 CHST5Q9GZS9 411 aa2.95□□□□□ -1.94
VPS13D-207ENST00000476169 ASB7Q9H672 318 aa2.95□□□□□ -1.94
VPS13D-207ENST00000476169 WFDC1Q9HC57 220 aa2.95□□□□□ -1.94
VPS13D-207ENST00000476169 PARP11Q9NR21 331 aa2.95□□□□□ -1.94
VPS13D-207ENST00000476169 RBM12B-AS1Q9P1G2 102 aa2.95□□□□□ -1.94
VPS13D-207ENST00000476169 OR12D3Q9UGF7 316 aa2.95□□□□□ -1.94
VPS13D-207ENST00000476169 GLS2Q9UI32 602 aa2.95□□□□□ -1.94
VPS13D-207ENST00000476169 LSM5Q9Y4Y9 91 aaKnown RBP2.95□□□□□ -1.94
VPS13D-207ENST00000476169 NRAPQ86VF7 1730 aa2.95□□□□□ -1.94
VPS13D-207ENST00000476169 PEAK1Q9H792 1746 aa2.95□□□□□ -1.94
VPS13D-207ENST00000476169 COL14A1Q05707 1796 aaKnown RBP2.95□□□□□ -1.94
VPS13D-207ENST00000476169 MN1Q10571 1320 aaPredicted RBP2.94□□□□□ -1.94
VPS13D-207ENST00000476169 TMEM131Q92545 1883 aa2.94□□□□□ -1.94
VPS13D-207ENST00000476169 CRYBG1Q9Y4K1 1723 aa2.94□□□□□ -1.94
VPS13D-207ENST00000476169 CCL15-CCL14A0A0B4J2E2 113 aa2.94□□□□□ -1.94
VPS13D-207ENST00000476169 IGHV5-51A0A0C4DH38 117 aa2.94□□□□□ -1.94
VPS13D-207ENST00000476169 E5RI56 91 aa2.94□□□□□ -1.94
VPS13D-207ENST00000476169 KCNK2O95069 426 aa2.94□□□□□ -1.94
VPS13D-207ENST00000476169 CYB5R3P00387 301 aaPredicted RBP2.94□□□□□ -1.94
VPS13D-207ENST00000476169 LINC00614P0C842 121 aa2.94□□□□□ -1.94
VPS13D-207ENST00000476169 CECR9P0C854 216 aa2.94□□□□□ -1.94
VPS13D-207ENST00000476169 SCGB1C2P0DMR2 95 aa2.94□□□□□ -1.94
VPS13D-207ENST00000476169 ME2P23368 584 aa2.94□□□□□ -1.94
VPS13D-207ENST00000476169 TAS2R43P59537 309 aa2.94□□□□□ -1.94
VPS13D-207ENST00000476169 SLC35A2P78381 396 aa2.94□□□□□ -1.94
VPS13D-207ENST00000476169 MEF2CQ06413 473 aaPredicted RBP2.94□□□□□ -1.94
VPS13D-207ENST00000476169 DAZ2Q13117 558 aaKnown RBP2.94□□□□□ -1.94
VPS13D-207ENST00000476169 SSX1Q16384 188 aa2.94□□□□□ -1.94
VPS13D-207ENST00000476169 CCL15Q16663 113 aa2.94□□□□□ -1.94
VPS13D-207ENST00000476169 ZNF684Q5T5D7 378 aa2.94□□□□□ -1.94
VPS13D-207ENST00000476169 HIST2H3PS2Q5TEC6 136 aa2.94□□□□□ -1.94
VPS13D-207ENST00000476169 C1orf195Q5TG92 126 aa2.94□□□□□ -1.94
VPS13D-207ENST00000476169 SYPL2Q5VXT5 272 aa2.94□□□□□ -1.94
VPS13D-207ENST00000476169 TMEM205Q6UW68 189 aa2.94□□□□□ -1.94
VPS13D-207ENST00000476169 S100A7AQ86SG5 101 aa2.94□□□□□ -1.94
VPS13D-207ENST00000476169 MYPOPQ86VE0 399 aaPredicted RBP2.94□□□□□ -1.94
VPS13D-207ENST00000476169 PDPNQ86YL7 162 aa2.94□□□□□ -1.94
VPS13D-207ENST00000476169 ZNF584Q8IVC4 421 aa2.94□□□□□ -1.94
VPS13D-207ENST00000476169 RIMKLAQ8IXN7 391 aa2.94□□□□□ -1.94
VPS13D-207ENST00000476169 ABCA7Q8IZY2 2146 aa2.94□□□□□ -1.94
VPS13D-207ENST00000476169 MUC15Q8N387 334 aa2.94□□□□□ -1.94
VPS13D-207ENST00000476169 LINC00337Q8N6G1 96 aa2.94□□□□□ -1.94
VPS13D-207ENST00000476169 SCGB1C1Q8TD33 95 aa2.94□□□□□ -1.94
VPS13D-207ENST00000476169 DTD1Q8TEA8 209 aa2.94□□□□□ -1.94
VPS13D-207ENST00000476169 SRSF12Q8WXF0 261 aaKnown RBP2.94□□□□□ -1.94
VPS13D-207ENST00000476169 PECRQ9BY49 303 aa2.94□□□□□ -1.94
VPS13D-207ENST00000476169 SLC17A9Q9BYT1 436 aa2.94□□□□□ -1.94
VPS13D-207ENST00000476169 FGF23Q9GZV9 251 aaPredicted RBP2.94□□□□□ -1.94
VPS13D-207ENST00000476169 OR52D1Q9H346 318 aa2.94□□□□□ -1.94
Retrieved 100 of 20,778 RNA–protein pairs in 52.5 ms