RNA–Protein interactions for RNA: ENST00000453858.1

SBDSP1-204, Transcript of SBDS, ribosome maturation factor pseudogene 1, humanhuman

BASIC

Gene SBDSP1, Length 737 nt, Biotype transcribed unprocessed pseudogene, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SBDSP1-204ENST00000453858 SGK3Q96BR1 496 aa3.62□□□□□ -1.83
SBDSP1-204ENST00000453858 RNF170Q96K19 258 aa3.62□□□□□ -1.83
SBDSP1-204ENST00000453858 ZNF488Q96MN9 340 aa3.62□□□□□ -1.83
SBDSP1-204ENST00000453858 MICU1Q9BPX6 476 aa3.62□□□□□ -1.83
SBDSP1-204ENST00000453858 CSTL1Q9H114 145 aa3.62□□□□□ -1.83
SBDSP1-204ENST00000453858 PPIL3Q9H2H8 161 aaKnown RBP3.62□□□□□ -1.83
SBDSP1-204ENST00000453858 GRPEL1Q9HAV7 217 aa3.62□□□□□ -1.83
SBDSP1-204ENST00000453858 GPR173Q9NS66 373 aa3.62□□□□□ -1.83
SBDSP1-204ENST00000453858 CNOT2Q9NZN8 540 aaKnown RBP3.62□□□□□ -1.83
SBDSP1-204ENST00000453858 TMEM216Q9P0N5 145 aa3.62□□□□□ -1.83
SBDSP1-204ENST00000453858 CELA1Q9UNI1 258 aa3.62□□□□□ -1.83
SBDSP1-204ENST00000453858 FOXA2Q9Y261 457 aaPredicted RBP3.62□□□□□ -1.83
SBDSP1-204ENST00000453858 IGHV1-3A0A0C4DH29 117 aa3.61□□□□□ -1.83
SBDSP1-204ENST00000453858 A0A1W2PN81 502 aa3.61□□□□□ -1.83
SBDSP1-204ENST00000453858 J3QR06 171 aa3.61□□□□□ -1.83
SBDSP1-204ENST00000453858 M0R135 149 aa3.61□□□□□ -1.83
SBDSP1-204ENST00000453858 KPNA4O00629 521 aaPredicted RBP3.61□□□□□ -1.83
SBDSP1-204ENST00000453858 PEX11AO75192 247 aa3.61□□□□□ -1.83
SBDSP1-204ENST00000453858 MOSP00540 346 aa3.61□□□□□ -1.83
SBDSP1-204ENST00000453858 HLA-DRB1P01911 266 aa3.61□□□□□ -1.83
SBDSP1-204ENST00000453858 BCHEP06276 602 aa3.61□□□□□ -1.83
SBDSP1-204ENST00000453858 SCTP09683 121 aa3.61□□□□□ -1.83
SBDSP1-204ENST00000453858 FUT3P21217 361 aa3.61□□□□□ -1.83
SBDSP1-204ENST00000453858 CD1BP29016 333 aa3.61□□□□□ -1.83
SBDSP1-204ENST00000453858 ATP6V1E1P36543 226 aa3.61□□□□□ -1.83
SBDSP1-204ENST00000453858 CHRNA7P36544 502 aa3.61□□□□□ -1.83
SBDSP1-204ENST00000453858 VHLP40337 213 aa3.61□□□□□ -1.83
SBDSP1-204ENST00000453858 CAMPP49913 170 aa3.61□□□□□ -1.83
SBDSP1-204ENST00000453858 HNRNPA3P51991 378 aaKnown RBP3.61□□□□□ -1.83
SBDSP1-204ENST00000453858 ZNF816Q0VGE8 651 aaPredicted RBP3.61□□□□□ -1.83
SBDSP1-204ENST00000453858 MADCAM1Q13477 382 aa3.61□□□□□ -1.83
SBDSP1-204ENST00000453858 RBM39Q14498 530 aaKnown RBP3.61□□□□□ -1.83
SBDSP1-204ENST00000453858 MEP1BQ16820 701 aa3.61□□□□□ -1.83
SBDSP1-204ENST00000453858 TATDN3Q17R31 274 aa3.61□□□□□ -1.83
SBDSP1-204ENST00000453858 SMIM21Q3B7S5 101 aa3.61□□□□□ -1.83
SBDSP1-204ENST00000453858 WDR73Q6P4I2 378 aa3.61□□□□□ -1.83
SBDSP1-204ENST00000453858 CD200R1LQ6Q8B3 271 aa3.61□□□□□ -1.83
SBDSP1-204ENST00000453858 GDPD3Q7L5L3 318 aa3.61□□□□□ -1.83
SBDSP1-204ENST00000453858 RNF113BQ8IZP6 322 aaKnown RBP3.61□□□□□ -1.83
SBDSP1-204ENST00000453858 C17orf53Q8N3J3 647 aaPredicted RBP3.61□□□□□ -1.83
SBDSP1-204ENST00000453858 LINC00471Q8N535 108 aa3.61□□□□□ -1.83
SBDSP1-204ENST00000453858 POC1AQ8NBT0 407 aa3.61□□□□□ -1.83
SBDSP1-204ENST00000453858 ZNF671Q8TAW3 534 aa3.61□□□□□ -1.83
SBDSP1-204ENST00000453858 ORAI1Q96D31 301 aa3.61□□□□□ -1.83
SBDSP1-204ENST00000453858 ZNF799Q96GE5 643 aa3.61□□□□□ -1.83
SBDSP1-204ENST00000453858 MS4A10Q96PG2 267 aa3.61□□□□□ -1.83
SBDSP1-204ENST00000453858 MBOAT4Q96T53 435 aa3.61□□□□□ -1.83
SBDSP1-204ENST00000453858 C1orf50Q9BV19 199 aa3.61□□□□□ -1.83
SBDSP1-204ENST00000453858 RTL8AQ9BWD3 113 aa3.61□□□□□ -1.83
SBDSP1-204ENST00000453858 TMEM38AQ9H6F2 299 aa3.61□□□□□ -1.83
SBDSP1-204ENST00000453858 CYB5R1Q9UHQ9 305 aa3.61□□□□□ -1.83
SBDSP1-204ENST00000453858 SLC22A13Q9Y226 551 aa3.61□□□□□ -1.83
SBDSP1-204ENST00000453858 PPP2R2CQ9Y2T4 447 aa3.61□□□□□ -1.83
SBDSP1-204ENST00000453858 MPC1Q9Y5U8 109 aa3.61□□□□□ -1.83
SBDSP1-204ENST00000453858 SELENOKQ9Y6D0 94 aa3.61□□□□□ -1.83
SBDSP1-204ENST00000453858 MACF1Q9UPN3 7388 aaKnown RBP3.61□□□□□ -1.83
SBDSP1-204ENST00000453858 hCG_38984A0A1B0GV85 526 aa3.6□□□□□ -1.83
SBDSP1-204ENST00000453858 PRSS37A4D1T9 235 aa3.6□□□□□ -1.83
SBDSP1-204ENST00000453858 A6NIZ1 184 aa3.6□□□□□ -1.83
SBDSP1-204ENST00000453858 C2orf70A6NJV1 201 aa3.6□□□□□ -1.83
SBDSP1-204ENST00000453858 MPTX1A8MV57 137 aa3.6□□□□□ -1.83
SBDSP1-204ENST00000453858 OGG1O15527 345 aa3.6□□□□□ -1.83
SBDSP1-204ENST00000453858 CST4P01036 141 aa3.6□□□□□ -1.83
SBDSP1-204ENST00000453858 MT-ND1P03886 318 aa3.6□□□□□ -1.83
SBDSP1-204ENST00000453858 CGB3P0DN86 165 aa3.6□□□□□ -1.83
SBDSP1-204ENST00000453858 CGB7P0DN87 165 aa3.6□□□□□ -1.83
SBDSP1-204ENST00000453858 SLC2A2P11168 524 aaPredicted RBP3.6□□□□□ -1.83
SBDSP1-204ENST00000453858 ACKR3P25106 362 aa3.6□□□□□ -1.83
SBDSP1-204ENST00000453858 ALDH3A1P30838 453 aa3.6□□□□□ -1.83
SBDSP1-204ENST00000453858 ANP32AP39687 249 aaKnown RBP3.6□□□□□ -1.83
SBDSP1-204ENST00000453858 RAP1BP61224 184 aa3.6□□□□□ -1.83
SBDSP1-204ENST00000453858 ERVK11-1P61568 191 aa3.6□□□□□ -1.83
SBDSP1-204ENST00000453858 RAP1AP62834 184 aa3.6□□□□□ -1.83
SBDSP1-204ENST00000453858 ANKRD55Q3KP44 614 aa3.6□□□□□ -1.83
SBDSP1-204ENST00000453858 PYHIN1Q6K0P9 492 aa3.6□□□□□ -1.83
SBDSP1-204ENST00000453858 ZNF343Q6P1L6 599 aa3.6□□□□□ -1.83
SBDSP1-204ENST00000453858 TTC33Q6PID6 262 aaPredicted RBP3.6□□□□□ -1.83
SBDSP1-204ENST00000453858 LCA5Q86VQ0 697 aa3.6□□□□□ -1.83
SBDSP1-204ENST00000453858 ANGPTL5Q86XS5 388 aa3.6□□□□□ -1.83
SBDSP1-204ENST00000453858 SLC22A9Q8IVM8 553 aa3.6□□□□□ -1.83
SBDSP1-204ENST00000453858 OR6V1Q8N148 313 aa3.6□□□□□ -1.83
SBDSP1-204ENST00000453858 CCNYL1Q8N7R7 359 aa3.6□□□□□ -1.83
SBDSP1-204ENST00000453858 YIPF7Q8N8F6 280 aa3.6□□□□□ -1.83
SBDSP1-204ENST00000453858 OR9G1Q8NH87 305 aa3.6□□□□□ -1.83
SBDSP1-204ENST00000453858 GALNT14Q96FL9 552 aa3.6□□□□□ -1.83
SBDSP1-204ENST00000453858 TEX12Q9BXU0 123 aa3.6□□□□□ -1.83
SBDSP1-204ENST00000453858 PARP12Q9H0J9 701 aaKnown RBP3.6□□□□□ -1.83
SBDSP1-204ENST00000453858 OPA3Q9H6K4 179 aa3.6□□□□□ -1.83
SBDSP1-204ENST00000453858 VIPAS39Q9H9C1 493 aa3.6□□□□□ -1.83
SBDSP1-204ENST00000453858 Q9N2K0 584 aa3.6□□□□□ -1.83
SBDSP1-204ENST00000453858 PARP11Q9NR21 331 aa3.6□□□□□ -1.83
SBDSP1-204ENST00000453858 ZNF319Q9P2F9 582 aa3.6□□□□□ -1.83
SBDSP1-204ENST00000453858 PEF1Q9UBV8 284 aaKnown RBP3.6□□□□□ -1.83
SBDSP1-204ENST00000453858 BTNL2Q9UIR0 455 aa3.6□□□□□ -1.83
SBDSP1-204ENST00000453858 COPS3Q9UNS2 423 aa3.6□□□□□ -1.83
SBDSP1-204ENST00000453858 RPL36Q9Y3U8 105 aaKnown RBP3.6□□□□□ -1.83
SBDSP1-204ENST00000453858 USH2AO75445 5202 aa3.6□□□□□ -1.83
SBDSP1-204ENST00000453858 NEBP20929 6669 aa3.59□□□□□ -1.83
SBDSP1-204ENST00000453858 ANXA2P2A6NMY6 339 aa3.59□□□□□ -1.83
SBDSP1-204ENST00000453858 DCTN6O00399 190 aa3.59□□□□□ -1.83
Retrieved 100 of 20,778 RNA–protein pairs in 65.8 ms