RNA–Protein interactions for RNA: ENST00000427516.2

VTI1BP4-201, Transcript of vesicle transport through interaction with t-SNAREs 1B pseudogene 4, humanhuman

BASIC

Gene VTI1BP4, Length 527 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VTI1BP4-201ENST00000427516 HMGN2P46Q86SG4 172 aa4.87□□□□□ -1.63
VTI1BP4-201ENST00000427516 LYPD6Q86Y78 171 aa4.87□□□□□ -1.63
VTI1BP4-201ENST00000427516 SCCPDHQ8NBX0 429 aa4.87□□□□□ -1.63
VTI1BP4-201ENST00000427516 NECAP1Q8NC96 275 aa4.87□□□□□ -1.63
VTI1BP4-201ENST00000427516 ZNF740Q8NDX6 193 aa4.87□□□□□ -1.63
VTI1BP4-201ENST00000427516 Q8NFD4 153 aa4.87□□□□□ -1.63
VTI1BP4-201ENST00000427516 OR51T1Q8NGJ9 327 aa4.87□□□□□ -1.63
VTI1BP4-201ENST00000427516 OR2AJ1Q8NGZ0 328 aa4.87□□□□□ -1.63
VTI1BP4-201ENST00000427516 SGMS2Q8NHU3 365 aa4.87□□□□□ -1.63
VTI1BP4-201ENST00000427516 DOK4Q8TEW6 326 aa4.87□□□□□ -1.63
VTI1BP4-201ENST00000427516 MRAP2Q96G30 205 aa4.87□□□□□ -1.63
VTI1BP4-201ENST00000427516 SIGLEC12Q96PQ1 595 aa4.87□□□□□ -1.63
VTI1BP4-201ENST00000427516 RSG1Q9BU20 258 aa4.87□□□□□ -1.63
VTI1BP4-201ENST00000427516 ST6GALNAC5Q9BVH7 336 aa4.87□□□□□ -1.63
VTI1BP4-201ENST00000427516 ULBP3Q9BZM4 244 aa4.87□□□□□ -1.63
VTI1BP4-201ENST00000427516 WDR61Q9GZS3 305 aaKnown RBP4.87□□□□□ -1.63
VTI1BP4-201ENST00000427516 MS4A6AQ9H2W1 248 aa4.87□□□□□ -1.63
VTI1BP4-201ENST00000427516 SRA1Q9HD15 236 aaKnown RBP4.87□□□□□ -1.63
VTI1BP4-201ENST00000427516 PLSCR4Q9NRQ2 329 aa4.87□□□□□ -1.63
VTI1BP4-201ENST00000427516 TMEM38BQ9NVV0 291 aa4.87□□□□□ -1.63
VTI1BP4-201ENST00000427516 ABI3Q9P2A4 366 aa4.87□□□□□ -1.63
VTI1BP4-201ENST00000427516 ANXA10Q9UJ72 324 aa4.87□□□□□ -1.63
VTI1BP4-201ENST00000427516 RNF24Q9Y225 148 aa4.87□□□□□ -1.63
VTI1BP4-201ENST00000427516 UBE2J1Q9Y385 318 aaPredicted RBP4.87□□□□□ -1.63
VTI1BP4-201ENST00000427516 MRPL42Q9Y6G3 142 aaKnown RBP4.87□□□□□ -1.63
VTI1BP4-201ENST00000427516 KCNE3Q9Y6H6 103 aa4.87□□□□□ -1.63
VTI1BP4-201ENST00000427516 HELZP42694 1942 aaKnown RBP4.87□□□□□ -1.63
VTI1BP4-201ENST00000427516 SCN2AQ99250 2005 aa4.87□□□□□ -1.63
VTI1BP4-201ENST00000427516 PIKFYVEQ9Y2I7 2098 aa4.87□□□□□ -1.63
VTI1BP4-201ENST00000427516 LOC102725191A0A1B0GVB3 256 aa4.86□□□□□ -1.63
VTI1BP4-201ENST00000427516 PRSS37A4D1T9 235 aa4.86□□□□□ -1.63
VTI1BP4-201ENST00000427516 NPIPB13A6NJU9 1138 aa4.86□□□□□ -1.63
VTI1BP4-201ENST00000427516 LRRC3CA6NJW4 275 aa4.86□□□□□ -1.63
VTI1BP4-201ENST00000427516 ZNF850A8MQ14 1090 aa4.86□□□□□ -1.63
VTI1BP4-201ENST00000427516 OR11H12B2RN74 326 aa4.86□□□□□ -1.63
VTI1BP4-201ENST00000427516 NPIPB4C9JG80 1138 aa4.86□□□□□ -1.63
VTI1BP4-201ENST00000427516 M0QZ24 198 aa4.86□□□□□ -1.63
VTI1BP4-201ENST00000427516 SDCBPO00560 298 aaPredicted RBP4.86□□□□□ -1.63
VTI1BP4-201ENST00000427516 PHF1O43189 567 aaPredicted RBP4.86□□□□□ -1.63
VTI1BP4-201ENST00000427516 XRCC2O43543 280 aa4.86□□□□□ -1.63
VTI1BP4-201ENST00000427516 SSSCA1O60232 199 aa4.86□□□□□ -1.63
VTI1BP4-201ENST00000427516 ZNF324O75467 553 aaPredicted RBP4.86□□□□□ -1.63
VTI1BP4-201ENST00000427516 TRAPPC6AO75865 159 aa4.86□□□□□ -1.63
VTI1BP4-201ENST00000427516 SERF1AO75920 110 aa4.86□□□□□ -1.63
VTI1BP4-201ENST00000427516 HAND1O96004 215 aa4.86□□□□□ -1.63
VTI1BP4-201ENST00000427516 IGHMP01871 453 aa4.86□□□□□ -1.63
VTI1BP4-201ENST00000427516 ASAH2BP0C7U1 165 aa4.86□□□□□ -1.63
VTI1BP4-201ENST00000427516 FTH1P19P0C7X4 201 aa4.86□□□□□ -1.63
VTI1BP4-201ENST00000427516 PMCHP20382 165 aa4.86□□□□□ -1.63
VTI1BP4-201ENST00000427516 OMGP23515 440 aa4.86□□□□□ -1.63
VTI1BP4-201ENST00000427516 ADCYAP1R1P41586 468 aa4.86□□□□□ -1.63
VTI1BP4-201ENST00000427516 GPR1P46091 355 aa4.86□□□□□ -1.63
VTI1BP4-201ENST00000427516 GNG4P50150 75 aa4.86□□□□□ -1.63
VTI1BP4-201ENST00000427516 DYNLT3P51808 116 aa4.86□□□□□ -1.63
VTI1BP4-201ENST00000427516 CLDN15P56746 228 aa4.86□□□□□ -1.63
VTI1BP4-201ENST00000427516 PLP1P60201 277 aa4.86□□□□□ -1.63
VTI1BP4-201ENST00000427516 RPL27P61353 136 aaKnown RBP4.86□□□□□ -1.63
VTI1BP4-201ENST00000427516 RPL24P83731 157 aaKnown RBP4.86□□□□□ -1.63
VTI1BP4-201ENST00000427516 SMAD3P84022 425 aaKnown RBP4.86□□□□□ -1.63
VTI1BP4-201ENST00000427516 ZNF90Q03938 601 aa4.86□□□□□ -1.63
VTI1BP4-201ENST00000427516 ZFP36L1Q07352 338 aaKnown RBP4.86□□□□□ -1.63
VTI1BP4-201ENST00000427516 DPTQ07507 201 aa4.86□□□□□ -1.63
VTI1BP4-201ENST00000427516 DMWDQ09019 674 aa4.86□□□□□ -1.63
VTI1BP4-201ENST00000427516 C5orf64Q2M2E5 130 aa4.86□□□□□ -1.63
VTI1BP4-201ENST00000427516 RPEL1Q2QD12 228 aa4.86□□□□□ -1.63
VTI1BP4-201ENST00000427516 ZNF658BQ4V348 819 aaPredicted RBP4.86□□□□□ -1.63
VTI1BP4-201ENST00000427516 PHYHD1Q5SRE7 291 aa4.86□□□□□ -1.63
VTI1BP4-201ENST00000427516 HLA-DQA1Q5Y7H0 255 aa4.86□□□□□ -1.63
VTI1BP4-201ENST00000427516 UNQ5815/PRO19632Q6UWF5 114 aa4.86□□□□□ -1.63
VTI1BP4-201ENST00000427516 MEX3BQ6ZN04 569 aaKnown RBP4.86□□□□□ -1.63
VTI1BP4-201ENST00000427516 RFLNAQ6ZTI6 216 aa4.86□□□□□ -1.63
VTI1BP4-201ENST00000427516 DOK3Q7L591 496 aa4.86□□□□□ -1.63
VTI1BP4-201ENST00000427516 RD3Q7Z3Z2 195 aa4.86□□□□□ -1.63
VTI1BP4-201ENST00000427516 C17orf78Q8N4C9 275 aa4.86□□□□□ -1.63
VTI1BP4-201ENST00000427516 FER1L6-AS1Q8NA97 138 aa4.86□□□□□ -1.63
VTI1BP4-201ENST00000427516 BHLHE23Q8NDY6 225 aa4.86□□□□□ -1.63
VTI1BP4-201ENST00000427516 KLHDC9Q8NEP7 349 aa4.86□□□□□ -1.63
VTI1BP4-201ENST00000427516 OR11H1Q8NG94 326 aa4.86□□□□□ -1.63
VTI1BP4-201ENST00000427516 OR10G8Q8NGN5 311 aa4.86□□□□□ -1.63
VTI1BP4-201ENST00000427516 OR11H2Q8NH07 326 aa4.86□□□□□ -1.63
VTI1BP4-201ENST00000427516 OR10AC1Q8NH08 325 aa4.86□□□□□ -1.63
VTI1BP4-201ENST00000427516 NT5CQ8TCD5 201 aa4.86□□□□□ -1.63
VTI1BP4-201ENST00000427516 THAP3Q8WTV1 239 aaPredicted RBP4.86□□□□□ -1.63
VTI1BP4-201ENST00000427516 ASB10Q8WXI3 467 aa4.86□□□□□ -1.63
VTI1BP4-201ENST00000427516 PP6455Q8WZ26 134 aa4.86□□□□□ -1.63
VTI1BP4-201ENST00000427516 NUS1Q96E22 293 aa4.86□□□□□ -1.63
VTI1BP4-201ENST00000427516 RASL10BQ96S79 203 aa4.86□□□□□ -1.63
VTI1BP4-201ENST00000427516 CITED2Q99967 270 aaPredicted RBP4.86□□□□□ -1.63
VTI1BP4-201ENST00000427516 TM2D1Q9BX74 207 aa4.86□□□□□ -1.63
VTI1BP4-201ENST00000427516 ULBP2Q9BZM5 246 aa4.86□□□□□ -1.63
VTI1BP4-201ENST00000427516 VN1R1Q9GZP7 353 aa4.86□□□□□ -1.63
VTI1BP4-201ENST00000427516 TMEM191AQ9H0A3 160 aa4.86□□□□□ -1.63
VTI1BP4-201ENST00000427516 TMEM222Q9H0R3 208 aa4.86□□□□□ -1.63
VTI1BP4-201ENST00000427516 MRPL18Q9H0U6 180 aaKnown RBP4.86□□□□□ -1.63
VTI1BP4-201ENST00000427516 MMP25Q9NPA2 562 aa4.86□□□□□ -1.63
VTI1BP4-201ENST00000427516 C1RLQ9NZP8 487 aa4.86□□□□□ -1.63
VTI1BP4-201ENST00000427516 TRAPPC2LQ9UL33 140 aa4.86□□□□□ -1.63
VTI1BP4-201ENST00000427516 ABT1Q9ULW3 272 aaKnown RBP4.86□□□□□ -1.63
VTI1BP4-201ENST00000427516 POLR1DQ9Y2S0 133 aa4.86□□□□□ -1.63
VTI1BP4-201ENST00000427516 EMC9Q9Y3B6 208 aa4.86□□□□□ -1.63
Retrieved 100 of 20,778 RNA–protein pairs in 68.8 ms