RNA–Protein interactions for RNA: ENST00000380075.6

TRIM54-202, Transcript of tripartite motif containing 54, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRIM54, Length 1,967 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM54-202ENST00000380075 TMEM268Q5VZI3 342 aa18.3■□□□□ 0.52
TRIM54-202ENST00000380075 FAM180AQ6UWF9 173 aa18.3■□□□□ 0.52
TRIM54-202ENST00000380075 FAM219AQ8IW50 185 aa18.3■□□□□ 0.52
TRIM54-202ENST00000380075 CMTM1Q8IZ96 169 aa18.3■□□□□ 0.52
TRIM54-202ENST00000380075 BPIFCQ8NFQ6 507 aa18.3■□□□□ 0.52
TRIM54-202ENST00000380075 LHFPL5Q8TAF8 219 aa18.3■□□□□ 0.52
TRIM54-202ENST00000380075 ABHD14BQ96IU4 210 aa18.3■□□□□ 0.52
TRIM54-202ENST00000380075 SMIM8Q96KF7 97 aa18.3■□□□□ 0.52
TRIM54-202ENST00000380075 CABLES2Q9BTV7 478 aa18.3■□□□□ 0.52
TRIM54-202ENST00000380075 UBE2J1Q9Y385 318 aaPredicted RBP18.3■□□□□ 0.52
TRIM54-202ENST00000380075 POMT1Q9Y6A1 747 aa18.3■□□□□ 0.52
TRIM54-202ENST00000380075 LYZL6O75951 148 aa18.29■□□□□ 0.52
TRIM54-202ENST00000380075 C1QL1O75973 258 aa18.29■□□□□ 0.52
TRIM54-202ENST00000380075 UCP2P55851 309 aa18.29■□□□□ 0.52
TRIM54-202ENST00000380075 Q6P435 159 aa18.29■□□□□ 0.52
TRIM54-202ENST00000380075 MYPOPQ86VE0 399 aaPredicted RBP18.29■□□□□ 0.52
TRIM54-202ENST00000380075 UBAC2Q8NBM4 344 aa18.29■□□□□ 0.52
TRIM54-202ENST00000380075 OR4D5Q8NGN0 318 aa18.29■□□□□ 0.52
TRIM54-202ENST00000380075 ADAT1Q9BUB4 502 aaKnown RBP18.29■□□□□ 0.52
TRIM54-202ENST00000380075 IGKV1-6A0A0C4DH72 117 aa18.28■□□□□ 0.52
TRIM54-202ENST00000380075 ZNF705EA8MWA4 302 aaPredicted RBP18.28■□□□□ 0.52
TRIM54-202ENST00000380075 NPIPB11E5RHQ5 1161 aa18.28■□□□□ 0.52
TRIM54-202ENST00000380075 RHBDL1O75783 438 aa18.28■□□□□ 0.52
TRIM54-202ENST00000380075 ACAA1P09110 424 aaPredicted RBP18.28■□□□□ 0.52
TRIM54-202ENST00000380075 ZNF44P15621 663 aa18.28■□□□□ 0.52
TRIM54-202ENST00000380075 ERVK11-1P61568 191 aa18.28■□□□□ 0.52
TRIM54-202ENST00000380075 MEX3BQ6ZN04 569 aaKnown RBP18.28■□□□□ 0.52
TRIM54-202ENST00000380075 ZNF818PQ6ZRF7 136 aa18.28■□□□□ 0.52
TRIM54-202ENST00000380075 ZNF695Q8IW36 515 aa18.28■□□□□ 0.52
TRIM54-202ENST00000380075 ZNF843Q8N446 348 aa18.28■□□□□ 0.52
TRIM54-202ENST00000380075 SLC25A40Q8TBP6 338 aa18.28■□□□□ 0.52
TRIM54-202ENST00000380075 RDH5Q92781 318 aa18.28■□□□□ 0.52
TRIM54-202ENST00000380075 IL22RA2Q969J5 263 aa18.28■□□□□ 0.52
TRIM54-202ENST00000380075 AHRRA9YTQ3 701 aa18.28■□□□□ 0.52
TRIM54-202ENST00000380075 HS3ST1O14792 307 aa18.28■□□□□ 0.52
TRIM54-202ENST00000380075 IGKV3-15P01624 115 aa18.28■□□□□ 0.52
TRIM54-202ENST00000380075 CRYABP02511 175 aaKnown RBP18.28■□□□□ 0.52
TRIM54-202ENST00000380075 KIR2DL2P43627 348 aaPredicted RBP18.28■□□□□ 0.52
TRIM54-202ENST00000380075 SULT1A2P50226 295 aa18.28■□□□□ 0.52
TRIM54-202ENST00000380075 GAPTQ8N292 157 aa18.28■□□□□ 0.52
TRIM54-202ENST00000380075 CNEP1R1Q8N9A8 125 aa18.28■□□□□ 0.52
TRIM54-202ENST00000380075 SCCPDHQ8NBX0 429 aa18.28■□□□□ 0.52
TRIM54-202ENST00000380075 OR1J1Q8NGS3 322 aa18.28■□□□□ 0.52
TRIM54-202ENST00000380075 KIRREL1Q96J84 757 aa18.28■□□□□ 0.52
TRIM54-202ENST00000380075 FAM208BQ5VWN6 2430 aa18.27■□□□□ 0.52
TRIM54-202ENST00000380075 APOC3P02656 99 aa18.27■□□□□ 0.52
TRIM54-202ENST00000380075 UCP1P25874 307 aa18.27■□□□□ 0.52
TRIM54-202ENST00000380075 BLOC1S1P78537 153 aa18.27■□□□□ 0.52
TRIM54-202ENST00000380075 GNMTQ14749 295 aa18.27■□□□□ 0.52
TRIM54-202ENST00000380075 ZNF324BQ6AW86 544 aaPredicted RBP18.27■□□□□ 0.52
TRIM54-202ENST00000380075 C17orf78Q8N4C9 275 aa18.27■□□□□ 0.52
TRIM54-202ENST00000380075 OR10J5Q8NHC4 309 aa18.27■□□□□ 0.52
TRIM54-202ENST00000380075 NRIP2Q9BQI9 281 aa18.27■□□□□ 0.52
TRIM54-202ENST00000380075 BORCS7-ASMTA0A0B4J1R7 106 aa18.26■□□□□ 0.51
TRIM54-202ENST00000380075 PGA5P0DJD9 388 aa18.26■□□□□ 0.51
TRIM54-202ENST00000380075 GLI4P10075 376 aa18.26■□□□□ 0.51
TRIM54-202ENST00000380075 WDR86Q86TI4 376 aa18.26■□□□□ 0.51
TRIM54-202ENST00000380075 C9orf106Q8NAJ2 232 aa18.26■□□□□ 0.51
TRIM54-202ENST00000380075 OR52M1Q8NGK5 317 aa18.26■□□□□ 0.51
TRIM54-202ENST00000380075 ARV1Q9H2C2 271 aa18.26■□□□□ 0.51
TRIM54-202ENST00000380075 OBP2BQ9NPH6 170 aa18.26■□□□□ 0.51
TRIM54-202ENST00000380075 OR2W1Q9Y3N9 320 aa18.26■□□□□ 0.51
TRIM54-202ENST00000380075 IGKV1D-13A0A0B4J2D9 117 aa18.26■□□□□ 0.51
TRIM54-202ENST00000380075 CLEC18AA5D8T8 446 aa18.26■□□□□ 0.51
TRIM54-202ENST00000380075 H0Y980 276 aa18.26■□□□□ 0.51
TRIM54-202ENST00000380075 WNT2P09544 360 aa18.26■□□□□ 0.51
TRIM54-202ENST00000380075 IGKV1-13P0DP09 117 aa18.26■□□□□ 0.51
TRIM54-202ENST00000380075 TAGLNQ01995 201 aaKnown RBP18.26■□□□□ 0.51
TRIM54-202ENST00000380075 ZNF146Q15072 292 aa18.26■□□□□ 0.51
TRIM54-202ENST00000380075 H1FOOQ8IZA3 346 aaPredicted RBP18.26■□□□□ 0.51
TRIM54-202ENST00000380075 SELENOHQ8IZQ5 122 aaKnown RBP18.26■□□□□ 0.51
TRIM54-202ENST00000380075 CLEC18CQ8NCF0 446 aa18.26■□□□□ 0.51
TRIM54-202ENST00000380075 OR5D13Q8NGL4 314 aa18.26■□□□□ 0.51
TRIM54-202ENST00000380075 PLSCR4Q9NRQ2 329 aa18.26■□□□□ 0.51
TRIM54-202ENST00000380075 MED12LQ86YW9 2145 aa18.25■□□□□ 0.51
TRIM54-202ENST00000380075 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP18.25■□□□□ 0.51
TRIM54-202ENST00000380075 A0A1W2PR80 420 aa18.25■□□□□ 0.51
TRIM54-202ENST00000380075 TMEM218A2RU14 115 aa18.25■□□□□ 0.51
TRIM54-202ENST00000380075 PJVKQ0ZLH3 352 aa18.25■□□□□ 0.51
TRIM54-202ENST00000380075 PSG7Q13046 419 aa18.25■□□□□ 0.51
TRIM54-202ENST00000380075 ACSF3Q4G176 576 aaPredicted RBP18.25■□□□□ 0.51
TRIM54-202ENST00000380075 FIP1L1Q6UN15 594 aaKnown RBP18.25■□□□□ 0.51
TRIM54-202ENST00000380075 C20orf204Q6ZNR8 217 aa18.25■□□□□ 0.51
TRIM54-202ENST00000380075 NARS2Q96I59 477 aaKnown RBP18.25■□□□□ 0.51
TRIM54-202ENST00000380075 USB1Q9BQ65 265 aaKnown RBP18.25■□□□□ 0.51
TRIM54-202ENST00000380075 COL6A6A6NMZ7 2263 aa18.25■□□□□ 0.51
TRIM54-202ENST00000380075 PVALBP20472 110 aaPredicted RBP18.24■□□□□ 0.51
TRIM54-202ENST00000380075 ZNF154Q13106 437 aa18.24■□□□□ 0.51
TRIM54-202ENST00000380075 BTN1A1Q13410 526 aa18.24■□□□□ 0.51
TRIM54-202ENST00000380075 OR8G1Q15617 311 aa18.24■□□□□ 0.51
TRIM54-202ENST00000380075 MST1LQ2TV78 715 aa18.24■□□□□ 0.51
TRIM54-202ENST00000380075 C1orf174Q8IYL3 243 aa18.24■□□□□ 0.51
TRIM54-202ENST00000380075 SREK1IP1Q8N9Q2 155 aaPredicted RBP18.24■□□□□ 0.51
TRIM54-202ENST00000380075 WDR31Q8NA23 367 aa18.24■□□□□ 0.51
TRIM54-202ENST00000380075 RCL1Q9Y2P8 373 aaKnown RBP18.24■□□□□ 0.51
TRIM54-202ENST00000380075 SH2D1BO14796 132 aa18.24■□□□□ 0.51
TRIM54-202ENST00000380075 RCC1P18754 421 aaPredicted RBP18.24■□□□□ 0.51
TRIM54-202ENST00000380075 VDAC1P21796 283 aa18.24■□□□□ 0.51
TRIM54-202ENST00000380075 ERVS71-1P61550 626 aa18.24■□□□□ 0.51
TRIM54-202ENST00000380075 ZNF497Q6ZNH5 498 aa18.24■□□□□ 0.51
Retrieved 100 of 20,778 RNA–protein pairs in 96.2 ms