RNA–Protein interactions for RNA: ENST00000377078.2

USP11-202, Transcript of ubiquitin specific peptidase 11, humanhuman

TSL 5

Gene USP11, Length 1,077 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP11-202ENST00000377078 ANKRD65E5RJM6 399 aa13.72□□□□□ -0.21
USP11-202ENST00000377078 AIPO00170 330 aa13.72□□□□□ -0.21
USP11-202ENST00000377078 IGHV3-7P01780 117 aa13.72□□□□□ -0.21
USP11-202ENST00000377078 CDK1P06493 297 aa13.72□□□□□ -0.21
USP11-202ENST00000377078 HES1Q14469 280 aa13.72□□□□□ -0.21
USP11-202ENST00000377078 ABCA11PQ4W5N1 156 aa13.72□□□□□ -0.21
USP11-202ENST00000377078 RNLSQ5VYX0 342 aa13.72□□□□□ -0.21
USP11-202ENST00000377078 LAIR2Q6ISS4 152 aa13.72□□□□□ -0.21
USP11-202ENST00000377078 CENPVQ7Z7K6 275 aaPredicted RBP13.72□□□□□ -0.21
USP11-202ENST00000377078 THNSL2Q86YJ6 484 aa13.72□□□□□ -0.21
USP11-202ENST00000377078 OR8H3Q8N146 312 aa13.72□□□□□ -0.21
USP11-202ENST00000377078 OR52M1Q8NGK5 317 aa13.72□□□□□ -0.21
USP11-202ENST00000377078 LEAP2Q969E1 77 aa13.72□□□□□ -0.21
USP11-202ENST00000377078 ARL11Q969Q4 196 aa13.72□□□□□ -0.21
USP11-202ENST00000377078 FKBP14Q9NWM8 211 aa13.72□□□□□ -0.21
USP11-202ENST00000377078 GHRLQ9UBU3 117 aa13.72□□□□□ -0.21
USP11-202ENST00000377078 MOB4Q9Y3A3 225 aa13.72□□□□□ -0.21
USP11-202ENST00000377078 TRAV39A0A0B4J263 110 aa13.71□□□□□ -0.21
USP11-202ENST00000377078 A0A1W2PP11 408 aa13.71□□□□□ -0.21
USP11-202ENST00000377078 PTGES3LE9PB15 166 aa13.71□□□□□ -0.21
USP11-202ENST00000377078 SDCBPO00560 298 aaPredicted RBP13.71□□□□□ -0.21
USP11-202ENST00000377078 SPINT2O43291 252 aa13.71□□□□□ -0.21
USP11-202ENST00000377078 ORC5O43913 435 aa13.71□□□□□ -0.21
USP11-202ENST00000377078 CRTAPO75718 401 aaPredicted RBP13.71□□□□□ -0.21
USP11-202ENST00000377078 LPLP06858 475 aa13.71□□□□□ -0.21
USP11-202ENST00000377078 IL3RAP26951 378 aa13.71□□□□□ -0.21
USP11-202ENST00000377078 TMEM95Q3KNT9 176 aa13.71□□□□□ -0.21
USP11-202ENST00000377078 TMEM30BQ3MIR4 351 aa13.71□□□□□ -0.21
USP11-202ENST00000377078 C6orf141Q5SZD1 244 aa13.71□□□□□ -0.21
USP11-202ENST00000377078 C6orf183Q5T699 404 aa13.71□□□□□ -0.21
USP11-202ENST00000377078 RAB12Q6IQ22 244 aa13.71□□□□□ -0.21
USP11-202ENST00000377078 ZNF497Q6ZNH5 498 aa13.71□□□□□ -0.21
USP11-202ENST00000377078 Q6ZS46 218 aa13.71□□□□□ -0.21
USP11-202ENST00000377078 OR5AU1Q8NGC0 362 aa13.71□□□□□ -0.21
USP11-202ENST00000377078 OR56B4Q8NH76 319 aa13.71□□□□□ -0.21
USP11-202ENST00000377078 CCDC107Q8WV48 283 aa13.71□□□□□ -0.21
USP11-202ENST00000377078 R3HDM4Q96D70 268 aa13.71□□□□□ -0.21
USP11-202ENST00000377078 CITED2Q99967 270 aaPredicted RBP13.71□□□□□ -0.21
USP11-202ENST00000377078 OCSTAMPQ9BR26 566 aa13.71□□□□□ -0.21
USP11-202ENST00000377078 SELENOIQ9C0D9 397 aa13.71□□□□□ -0.21
USP11-202ENST00000377078 CST11Q9H112 138 aa13.71□□□□□ -0.21
USP11-202ENST00000377078 ETAA1Q9NY74 926 aa13.71□□□□□ -0.21
USP11-202ENST00000377078 ZNF581Q9P0T4 197 aa13.71□□□□□ -0.21
USP11-202ENST00000377078 TRAPPC2LQ9UL33 140 aa13.71□□□□□ -0.21
USP11-202ENST00000377078 FAM90A10PA6NDY2 464 aa13.7□□□□□ -0.22
USP11-202ENST00000377078 FAM90A18PA6NE21 464 aa13.7□□□□□ -0.22
USP11-202ENST00000377078 FAM90A16PA6NEW6 464 aa13.7□□□□□ -0.22
USP11-202ENST00000377078 FAM90A20PA6NIJ5 464 aa13.7□□□□□ -0.22
USP11-202ENST00000377078 FAM90A7PA6NKC0 464 aa13.7□□□□□ -0.22
USP11-202ENST00000377078 FAM90A12PA8MX19 464 aa13.7□□□□□ -0.22
USP11-202ENST00000377078 FAM90A5PA8MXJ8 464 aa13.7□□□□□ -0.22
USP11-202ENST00000377078 FAM90A23PA8MXZ1 464 aa13.7□□□□□ -0.22
USP11-202ENST00000377078 CA11O75493 328 aa13.7□□□□□ -0.22
USP11-202ENST00000377078 MT-ND4P03905 459 aa13.7□□□□□ -0.22
USP11-202ENST00000377078 FAM90A15PP0C7V4 464 aa13.7□□□□□ -0.22
USP11-202ENST00000377078 FAM90A13PP0C7W8 464 aa13.7□□□□□ -0.22
USP11-202ENST00000377078 FAM90A14PP0C7W9 464 aa13.7□□□□□ -0.22
USP11-202ENST00000377078 FAM90A24PP0C7X0 464 aa13.7□□□□□ -0.22
USP11-202ENST00000377078 MGMTP16455 207 aa13.7□□□□□ -0.22
USP11-202ENST00000377078 GABPB1Q06547 395 aaPredicted RBP13.7□□□□□ -0.22
USP11-202ENST00000377078 GPR50Q13585 617 aa13.7□□□□□ -0.22
USP11-202ENST00000377078 C9orf152Q5JTZ5 239 aa13.7□□□□□ -0.22
USP11-202ENST00000377078 TRAT1Q6PIZ9 186 aa13.7□□□□□ -0.22
USP11-202ENST00000377078 LYG1Q8N1E2 194 aa13.7□□□□□ -0.22
USP11-202ENST00000377078 DRAM1Q8N682 238 aa13.7□□□□□ -0.22
USP11-202ENST00000377078 OR4X2Q8NGF9 303 aa13.7□□□□□ -0.22
USP11-202ENST00000377078 VCX3BQ9H321 246 aa13.7□□□□□ -0.22
USP11-202ENST00000377078 RCC2Q9P258 522 aaKnown RBP13.7□□□□□ -0.22
USP11-202ENST00000377078 TPRKBQ9Y3C4 175 aa13.7□□□□□ -0.22
USP11-202ENST00000377078 PEX16Q9Y5Y5 336 aa13.7□□□□□ -0.22
USP11-202ENST00000377078 CCRL2O00421 344 aa13.69□□□□□ -0.22
USP11-202ENST00000377078 HSD17B6O14756 317 aa13.69□□□□□ -0.22
USP11-202ENST00000377078 GAPDHP04406 335 aaKnown RBP13.69□□□□□ -0.22
USP11-202ENST00000377078 GLAP06280 429 aa13.69□□□□□ -0.22
USP11-202ENST00000377078 SNRNP70P08621 437 aaKnown RBP13.69□□□□□ -0.22
USP11-202ENST00000377078 UBBP0CG47 229 aa13.69□□□□□ -0.22
USP11-202ENST00000377078 TMEM11P17152 192 aa13.69□□□□□ -0.22
USP11-202ENST00000377078 SPHARQ15513 63 aa13.69□□□□□ -0.22
USP11-202ENST00000377078 MED22Q15528 200 aa13.69□□□□□ -0.22
USP11-202ENST00000377078 Q3ZCU0 254 aa13.69□□□□□ -0.22
USP11-202ENST00000377078 ACSM3Q53FZ2 586 aa13.69□□□□□ -0.22
USP11-202ENST00000377078 UTF1Q5T230 341 aa13.69□□□□□ -0.22
USP11-202ENST00000377078 GLT8D1Q68CQ7 371 aa13.69□□□□□ -0.22
USP11-202ENST00000377078 HIST2H2BDQ6DRA6 164 aa13.69□□□□□ -0.22
USP11-202ENST00000377078 C8orf31Q8N9H6 132 aa13.69□□□□□ -0.22
USP11-202ENST00000377078 WIPF2Q8TF74 440 aaPredicted RBP13.69□□□□□ -0.22
USP11-202ENST00000377078 TMED9Q9BVK6 235 aa13.69□□□□□ -0.22
USP11-202ENST00000377078 BANF2Q9H503 90 aa13.69□□□□□ -0.22
USP11-202ENST00000377078 GNG12Q9UBI6 72 aa13.69□□□□□ -0.22
USP11-202ENST00000377078 A0A1W2PPI3 338 aa13.68□□□□□ -0.22
USP11-202ENST00000377078 FAM90A9PA6NNJ1 464 aa13.68□□□□□ -0.22
USP11-202ENST00000377078 H0YHG0 523 aa13.68□□□□□ -0.22
USP11-202ENST00000377078 C15orf65H3BRN8 121 aa13.68□□□□□ -0.22
USP11-202ENST00000377078 PIN1P1O15428 100 aa13.68□□□□□ -0.22
USP11-202ENST00000377078 FUT3P21217 361 aa13.68□□□□□ -0.22
USP11-202ENST00000377078 ZNF816Q0VGE8 651 aaPredicted RBP13.68□□□□□ -0.22
USP11-202ENST00000377078 RBM48Q5RL73 367 aaKnown RBP13.68□□□□□ -0.22
USP11-202ENST00000377078 SYT6Q5T7P8 510 aaPredicted RBP13.68□□□□□ -0.22
USP11-202ENST00000377078 C1QL4Q86Z23 238 aa13.68□□□□□ -0.22
USP11-202ENST00000377078 LINC00311Q8N616 119 aa13.68□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 63.6 ms