RNA–Protein interactions for RNA: ENST00000373779.7

PTPRU-202, Transcript of protein tyrosine phosphatase, receptor type U, humanhuman

TSL 1 (best) BASIC

Gene PTPRU, Length 5,579 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRU-202ENST00000373779 VAMP8Q9BV40 100 aa15.14■□□□□ 0.01
PTPRU-202ENST00000373779 OR2Z1Q8NG97 314 aa15.14■□□□□ 0.01
PTPRU-202ENST00000373779 TCFL5Q9UL49 500 aa15.14■□□□□ 0.01
PTPRU-202ENST00000373779 HSF4Q9ULV5 492 aa15.14■□□□□ 0.01
PTPRU-202ENST00000373779 CARHSP1Q9Y2V2 147 aaKnown RBP15.14■□□□□ 0.01
PTPRU-202ENST00000373779 A0A087X0M5 115 aa15.14■□□□□ 0.01
PTPRU-202ENST00000373779 A0A1B0GX30 115 aa15.14■□□□□ 0.01
PTPRU-202ENST00000373779 MMP9P14780 707 aa15.14■□□□□ 0.01
PTPRU-202ENST00000373779 BTNL3Q6UXE8 466 aa15.14■□□□□ 0.01
PTPRU-202ENST00000373779 H1FOOQ8IZA3 346 aaPredicted RBP15.14■□□□□ 0.01
PTPRU-202ENST00000373779 BOD1Q96IK1 185 aa15.14■□□□□ 0.01
PTPRU-202ENST00000373779 TRGV10A0A0A0MS01 117 aa15.14■□□□□ 0.01
PTPRU-202ENST00000373779 EIF3IQ13347 325 aaKnown RBP15.14■□□□□ 0.01
PTPRU-202ENST00000373779 FLVCR1-AS1Q8TAF5 88 aa15.14■□□□□ 0.01
PTPRU-202ENST00000373779 CT55Q8WUE5 264 aa15.14■□□□□ 0.01
PTPRU-202ENST00000373779 Q96M66 194 aa15.14■□□□□ 0.01
PTPRU-202ENST00000373779 CLCF1Q9UBD9 225 aa15.14■□□□□ 0.01
PTPRU-202ENST00000373779 J3QT63 122 aa15.14■□□□□ 0.01
PTPRU-202ENST00000373779 K7EQM0 130 aa15.14■□□□□ 0.01
PTPRU-202ENST00000373779 IGFBP3P17936 291 aaPredicted RBP15.14■□□□□ 0.01
PTPRU-202ENST00000373779 ARRDC1-AS1Q9H2J1 176 aa15.14■□□□□ 0.01
PTPRU-202ENST00000373779 SOX15O60248 233 aa15.13■□□□□ 0.01
PTPRU-202ENST00000373779 CA11O75493 328 aa15.13■□□□□ 0.01
PTPRU-202ENST00000373779 SNAI3Q3KNW1 292 aa15.13■□□□□ 0.01
PTPRU-202ENST00000373779 DTD1Q8TEA8 209 aa15.13■□□□□ 0.01
PTPRU-202ENST00000373779 VWA8A3KMH1 1905 aa15.13■□□□□ 0.01
PTPRU-202ENST00000373779 C11orf94C9JXX5 98 aa15.13■□□□□ 0.01
PTPRU-202ENST00000373779 ZNF708P17019 499 aa15.13■□□□□ 0.01
PTPRU-202ENST00000373779 ZNF766Q5HY98 468 aa15.13■□□□□ 0.01
PTPRU-202ENST00000373779 MSGN1A6NI15 193 aa15.13■□□□□ 0.01
PTPRU-202ENST00000373779 PLAC9Q5JTB6 97 aa15.13■□□□□ 0.01
PTPRU-202ENST00000373779 OR52M1Q8NGK5 317 aa15.13■□□□□ 0.01
PTPRU-202ENST00000373779 A0A1B0GTI1 187 aa15.13■□□□□ 0.01
PTPRU-202ENST00000373779 COX7A2P2O60397 106 aa15.13■□□□□ 0.01
PTPRU-202ENST00000373779 DANCRP0C864 163 aa15.13■□□□□ 0.01
PTPRU-202ENST00000373779 BCL2P10415 239 aa15.13■□□□□ 0.01
PTPRU-202ENST00000373779 DEFA4P12838 97 aa15.13■□□□□ 0.01
PTPRU-202ENST00000373779 CNN1P51911 297 aaKnown RBP15.13■□□□□ 0.01
PTPRU-202ENST00000373779 DNASE2O00115 360 aaPredicted RBP15.12■□□□□ 0.01
PTPRU-202ENST00000373779 DHRS7CA6NNS2 312 aa15.12■□□□□ 0.01
PTPRU-202ENST00000373779 EIF3GO75821 320 aaKnown RBP eCLIP15.12■□□□□ 0.01
PTPRU-202ENST00000373779 DUSP15Q9H1R2 295 aaPredicted RBP15.12■□□□□ 0.01
PTPRU-202ENST00000373779 PITPNC1Q9UKF7 332 aa15.12■□□□□ 0.01
PTPRU-202ENST00000373779 FZR1Q9UM11 496 aa15.12■□□□□ 0.01
PTPRU-202ENST00000373779 CELA2AP08217 269 aa15.12■□□□□ 0.01
PTPRU-202ENST00000373779 S100A7P31151 101 aa15.12■□□□□ 0.01
PTPRU-202ENST00000373779 OR1K1Q8NGR3 316 aa15.12■□□□□ 0.01
PTPRU-202ENST00000373779 CHRDL1Q9BU40 450 aa15.12■□□□□ 0.01
PTPRU-202ENST00000373779 TRAV39A0A0B4J263 110 aa15.12■□□□□ 0.01
PTPRU-202ENST00000373779 FOSL1P15407 271 aa15.12■□□□□ 0.01
PTPRU-202ENST00000373779 LY6G6FQ5SQ64 297 aa15.12■□□□□ 0.01
PTPRU-202ENST00000373779 PRR27Q6MZM9 219 aa15.12■□□□□ 0.01
PTPRU-202ENST00000373779 ANGPTL4Q9BY76 406 aa15.12■□□□□ 0.01
PTPRU-202ENST00000373779 IGKV1D-43A0A0B4J1Z2 117 aa15.11■□□□□ 0.01
PTPRU-202ENST00000373779 E9PQ18 207 aa15.11■□□□□ 0.01
PTPRU-202ENST00000373779 H0Y980 276 aa15.11■□□□□ 0.01
PTPRU-202ENST00000373779 HSPB1P04792 205 aaKnown RBP15.11■□□□□ 0.01
PTPRU-202ENST00000373779 RHOBP62745 196 aa15.11■□□□□ 0.01
PTPRU-202ENST00000373779 HIST1H2BAQ96A08 127 aa15.11■□□□□ 0.01
PTPRU-202ENST00000373779 SH3BGRL3Q9H299 93 aa15.11■□□□□ 0.01
PTPRU-202ENST00000373779 OOEPA6NGQ2 149 aa15.11■□□□□ 0.01
PTPRU-202ENST00000373779 CHEK1O14757 476 aa15.11■□□□□ 0.01
PTPRU-202ENST00000373779 LYZL6O75951 148 aa15.11■□□□□ 0.01
PTPRU-202ENST00000373779 HAND1O96004 215 aa15.11■□□□□ 0.01
PTPRU-202ENST00000373779 F2RP25116 425 aa15.11■□□□□ 0.01
PTPRU-202ENST00000373779 ABHD14BQ96IU4 210 aa15.11■□□□□ 0.01
PTPRU-202ENST00000373779 LRFN3Q9BTN0 628 aa15.11■□□□□ 0.01
PTPRU-202ENST00000373779 G0S2P27469 103 aa15.11■□□□□ 0.01
PTPRU-202ENST00000373779 CCKARP32238 428 aa15.11■□□□□ 0.01
PTPRU-202ENST00000373779 FGF12P61328 243 aa15.11■□□□□ 0.01
PTPRU-202ENST00000373779 LRRC29Q8WV35 223 aa15.11■□□□□ 0.01
PTPRU-202ENST00000373779 CXXC4Q9H2H0 198 aa15.11■□□□□ 0.01
PTPRU-202ENST00000373779 OR5H1A6NKK0 313 aa15.11■□□□□ 0.01
PTPRU-202ENST00000373779 CDIPTO14735 213 aa15.11■□□□□ 0.01
PTPRU-202ENST00000373779 TMEM187Q14656 261 aa15.11■□□□□ 0.01
PTPRU-202ENST00000373779 AARDQ4LEZ3 155 aa15.11■□□□□ 0.01
PTPRU-202ENST00000373779 ACY3Q96HD9 319 aa15.11■□□□□ 0.01
PTPRU-202ENST00000373779 NAT8BQ9UHF3 227 aa15.11■□□□□ 0.01
PTPRU-202ENST00000373779 SPAG17Q6Q759 2223 aa15.11■□□□□ 0.01
PTPRU-202ENST00000373779 HRASP01112 189 aa15.11■□□□□ 0.01
PTPRU-202ENST00000373779 KLK2P20151 261 aa15.11■□□□□ 0.01
PTPRU-202ENST00000373779 PMCHP20382 165 aa15.11■□□□□ 0.01
PTPRU-202ENST00000373779 CXorf66Q5JRM2 361 aaPredicted RBP15.11■□□□□ 0.01
PTPRU-202ENST00000373779 KLHDC1Q8N7A1 406 aa15.11■□□□□ 0.01
PTPRU-202ENST00000373779 R3HDM4Q96D70 268 aa15.11■□□□□ 0.01
PTPRU-202ENST00000373779 LYRM2Q9NU23 88 aaPredicted RBP15.11■□□□□ 0.01
PTPRU-202ENST00000373779 SLC45A2Q9UMX9 530 aa15.11■□□□□ 0.01
PTPRU-202ENST00000373779 SPRY3O43610 288 aa15.1■□□□□ 0.01
PTPRU-202ENST00000373779 PPP1CCP36873 323 aaKnown RBP15.1■□□□□ 0.01
PTPRU-202ENST00000373779 MAGEA5P43359 124 aa15.1■□□□□ 0.01
PTPRU-202ENST00000373779 ARSJQ5FYB0 599 aaPredicted RBP15.1■□□□□ 0.01
PTPRU-202ENST00000373779 FCN1O00602 326 aa15.1■□□□□ 0.01
PTPRU-202ENST00000373779 SCTP09683 121 aa15.1■□□□□ 0.01
PTPRU-202ENST00000373779 KIR2DS2P43631 304 aa15.1■□□□□ 0.01
PTPRU-202ENST00000373779 GNG4P50150 75 aa15.1■□□□□ 0.01
PTPRU-202ENST00000373779 CD81P60033 236 aa15.1■□□□□ 0.01
PTPRU-202ENST00000373779 RBPJQ06330 500 aa15.1■□□□□ 0.01
PTPRU-202ENST00000373779 FAM162BQ5T6X4 162 aa15.1■□□□□ 0.01
PTPRU-202ENST00000373779 ZNF880Q6PDB4 577 aa15.1■□□□□ 0.01
PTPRU-202ENST00000373779 SLC35E3Q7Z769 313 aa15.1■□□□□ 0.01
Retrieved 100 of 20,778 RNA–protein pairs in 801.5 ms