RNA–Protein interactions for RNA: ENST00000366942.3

USH2A-202, Transcript of usherin, humanhuman

TSL 1 (best) BASIC

Gene USH2A, Length 6,320 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USH2A-202ENST00000366942 BLOC1S1P78537 153 aa3.53□□□□□ -1.85
USH2A-202ENST00000366942 C2orf76Q3KRA6 126 aa3.53□□□□□ -1.85
USH2A-202ENST00000366942 FAM53AQ6NSI3 398 aaPredicted RBP3.53□□□□□ -1.85
USH2A-202ENST00000366942 PIP4P2Q8N4L2 257 aa3.53□□□□□ -1.85
USH2A-202ENST00000366942 C2orf50Q96LR7 162 aa3.53□□□□□ -1.85
USH2A-202ENST00000366942 IDI2-AS1Q9NZ38 188 aa3.53□□□□□ -1.85
USH2A-202ENST00000366942 FBXL2Q9UKC9 423 aa3.53□□□□□ -1.85
USH2A-202ENST00000366942 DSPPQ9NZW4 1301 aa3.52□□□□□ -1.85
USH2A-202ENST00000366942 F5H0A9 414 aaPredicted RBP3.52□□□□□ -1.85
USH2A-202ENST00000366942 NUDT3O95989 172 aa3.52□□□□□ -1.85
USH2A-202ENST00000366942 CLPSP04118 112 aa3.52□□□□□ -1.85
USH2A-202ENST00000366942 MMP7P09237 267 aaPredicted RBP3.52□□□□□ -1.85
USH2A-202ENST00000366942 PSMB3P49720 205 aa3.52□□□□□ -1.85
USH2A-202ENST00000366942 ERFP50548 548 aa3.52□□□□□ -1.85
USH2A-202ENST00000366942 HERPUD1Q15011 391 aa3.52□□□□□ -1.85
USH2A-202ENST00000366942 DAZAP2Q15038 168 aaPredicted RBP3.52□□□□□ -1.85
USH2A-202ENST00000366942 TP53I3Q53FA7 332 aa3.52□□□□□ -1.85
USH2A-202ENST00000366942 ZNF691Q5VV52 312 aa3.52□□□□□ -1.85
USH2A-202ENST00000366942 METAP1DQ6UB28 335 aaPredicted RBP3.52□□□□□ -1.85
USH2A-202ENST00000366942 DGAT2L6Q6ZPD8 337 aa3.52□□□□□ -1.85
USH2A-202ENST00000366942 OR52I1Q8NGK6 324 aa3.52□□□□□ -1.85
USH2A-202ENST00000366942 PLCXD1Q9NUJ7 323 aa3.52□□□□□ -1.85
USH2A-202ENST00000366942 TRAV27A0A087WT01 109 aa3.52□□□□□ -1.85
USH2A-202ENST00000366942 FFAR1O14842 300 aa3.52□□□□□ -1.85
USH2A-202ENST00000366942 IGHMP01871 453 aa3.52□□□□□ -1.85
USH2A-202ENST00000366942 ELANEP08246 267 aa3.52□□□□□ -1.85
USH2A-202ENST00000366942 MAS1LP35410 378 aa3.52□□□□□ -1.85
USH2A-202ENST00000366942 ACAA2P42765 397 aaKnown RBP3.52□□□□□ -1.85
USH2A-202ENST00000366942 OR3A1P47881 315 aa3.52□□□□□ -1.85
USH2A-202ENST00000366942 PSG9Q00887 426 aa3.52□□□□□ -1.85
USH2A-202ENST00000366942 RAB40BQ12829 278 aa3.52□□□□□ -1.85
USH2A-202ENST00000366942 KDM8Q8N371 416 aa3.52□□□□□ -1.85
USH2A-202ENST00000366942 C4orf32Q8N8J7 132 aa3.52□□□□□ -1.85
USH2A-202ENST00000366942 GPR119Q8TDV5 335 aa3.52□□□□□ -1.85
USH2A-202ENST00000366942 TMEM37Q8WXS4 190 aa3.52□□□□□ -1.85
USH2A-202ENST00000366942 TNFRSF25Q93038 417 aa3.52□□□□□ -1.85
USH2A-202ENST00000366942 PRELID3AQ96N28 172 aa3.52□□□□□ -1.85
USH2A-202ENST00000366942 CDCA4Q9BXL8 241 aa3.52□□□□□ -1.85
USH2A-202ENST00000366942 LINC00470Q9BZP3 86 aa3.52□□□□□ -1.85
USH2A-202ENST00000366942 TMEM38BQ9NVV0 291 aa3.52□□□□□ -1.85
USH2A-202ENST00000366942 HSPB7Q9UBY9 170 aa3.52□□□□□ -1.85
USH2A-202ENST00000366942 CD5LO43866 347 aa3.52□□□□□ -1.85
USH2A-202ENST00000366942 DEDDO75618 318 aa3.52□□□□□ -1.85
USH2A-202ENST00000366942 DLX1P56177 255 aa3.52□□□□□ -1.85
USH2A-202ENST00000366942 DLX6P56179 175 aa3.52□□□□□ -1.85
USH2A-202ENST00000366942 EGR3Q06889 387 aa3.52□□□□□ -1.85
USH2A-202ENST00000366942 SPANXN1Q5VSR9 72 aa3.52□□□□□ -1.85
USH2A-202ENST00000366942 ZNF774Q6NX45 483 aa3.52□□□□□ -1.85
USH2A-202ENST00000366942 ZNF679Q8IYX0 411 aa3.52□□□□□ -1.85
USH2A-202ENST00000366942 ZNF843Q8N446 348 aa3.52□□□□□ -1.85
USH2A-202ENST00000366942 GBGT1Q8N5D6 347 aa3.52□□□□□ -1.85
USH2A-202ENST00000366942 ZNF485Q8NCK3 441 aa3.52□□□□□ -1.85
USH2A-202ENST00000366942 L3HYPDHQ96EM0 354 aa3.52□□□□□ -1.85
USH2A-202ENST00000366942 ACTR3CQ9C0K3 210 aaPredicted RBP3.52□□□□□ -1.85
USH2A-202ENST00000366942 OR2H1Q9GZK4 316 aa3.52□□□□□ -1.85
USH2A-202ENST00000366942 PRORYQ9H606 182 aa3.52□□□□□ -1.85
USH2A-202ENST00000366942 HSPB11Q9Y547 144 aa3.52□□□□□ -1.85
USH2A-202ENST00000366942 CACNA1CQ13936 2221 aa3.52□□□□□ -1.85
USH2A-202ENST00000366942 C7orf72A4D263 438 aa3.52□□□□□ -1.85
USH2A-202ENST00000366942 CDIPTO14735 213 aa3.52□□□□□ -1.85
USH2A-202ENST00000366942 DHRS3O75911 302 aa3.52□□□□□ -1.85
USH2A-202ENST00000366942 ZNF735P0CB33 412 aa3.52□□□□□ -1.85
USH2A-202ENST00000366942 TRGC1P0CF51 173 aa3.52□□□□□ -1.85
USH2A-202ENST00000366942 FAM90A2PQ658T7 463 aa3.52□□□□□ -1.85
USH2A-202ENST00000366942 C10orf126Q8N4M7 172 aa3.52□□□□□ -1.85
USH2A-202ENST00000366942 OR1N2Q8NGR9 330 aa3.52□□□□□ -1.85
USH2A-202ENST00000366942 OR2J1Q9GZK6 312 aa3.52□□□□□ -1.85
USH2A-202ENST00000366942 KCNK15Q9H427 330 aa3.52□□□□□ -1.85
USH2A-202ENST00000366942 CYB5R1Q9UHQ9 305 aa3.52□□□□□ -1.85
USH2A-202ENST00000366942 STARD10Q9Y365 291 aa3.52□□□□□ -1.85
USH2A-202ENST00000366942 A0A1W2PR48 441 aa3.52□□□□□ -1.85
USH2A-202ENST00000366942 OR4C45A6NMZ5 311 aa3.52□□□□□ -1.85
USH2A-202ENST00000366942 E5RGE8 158 aa3.52□□□□□ -1.85
USH2A-202ENST00000366942 TCAPO15273 167 aa3.52□□□□□ -1.85
USH2A-202ENST00000366942 SULT1B1O43704 296 aa3.52□□□□□ -1.85
USH2A-202ENST00000366942 RAB5BP61020 215 aa3.52□□□□□ -1.85
USH2A-202ENST00000366942 PIN1Q13526 163 aaPredicted RBP3.52□□□□□ -1.85
USH2A-202ENST00000366942 EXOSC2Q13868 293 aaKnown RBP3.52□□□□□ -1.85
USH2A-202ENST00000366942 IL13RA2Q14627 380 aa3.52□□□□□ -1.85
USH2A-202ENST00000366942 TMEM215Q68D42 235 aa3.52□□□□□ -1.85
USH2A-202ENST00000366942 GPHB5Q86YW7 130 aa3.52□□□□□ -1.85
USH2A-202ENST00000366942 NAT8LQ8N9F0 302 aa3.52□□□□□ -1.85
USH2A-202ENST00000366942 OR51E1Q8TCB6 317 aa3.52□□□□□ -1.85
USH2A-202ENST00000366942 MCHR2Q969V1 340 aa3.52□□□□□ -1.85
USH2A-202ENST00000366942 Q96M85 177 aa3.52□□□□□ -1.85
USH2A-202ENST00000366942 FIZ1Q96SL8 496 aa3.52□□□□□ -1.85
USH2A-202ENST00000366942 R4GMQ9 66 aa3.52□□□□□ -1.85
USH2A-202ENST00000366942 TRAV3A0A0B4J244 114 aa3.51□□□□□ -1.85
USH2A-202ENST00000366942 LINC01619G3V211 115 aa3.51□□□□□ -1.85
USH2A-202ENST00000366942 GPR31O00270 319 aa3.51□□□□□ -1.85
USH2A-202ENST00000366942 HSD17B6O14756 317 aa3.51□□□□□ -1.85
USH2A-202ENST00000366942 SYNGR1O43759 233 aa3.51□□□□□ -1.85
USH2A-202ENST00000366942 EEDO75530 441 aaKnown RBP3.51□□□□□ -1.85
USH2A-202ENST00000366942 HPRT1P00492 218 aa3.51□□□□□ -1.85
USH2A-202ENST00000366942 RPL18Q07020 188 aaKnown RBP3.51□□□□□ -1.85
USH2A-202ENST00000366942 HAGHQ16775 308 aa3.51□□□□□ -1.85
USH2A-202ENST00000366942 FAM219BQ5XKK7 198 aa3.51□□□□□ -1.85
USH2A-202ENST00000366942 ZNF429Q86V71 674 aa3.51□□□□□ -1.85
USH2A-202ENST00000366942 OR5T1Q8NG75 326 aa3.51□□□□□ -1.85
USH2A-202ENST00000366942 OR13C2Q8NGS9 318 aa3.51□□□□□ -1.85
Retrieved 100 of 20,778 RNA–protein pairs in 36 ms