RNA–Protein interactions for RNA: ENST00000279452.10

CD44-204, Transcript of CD44 molecule (Indian blood group), humanhuman

TSL 3

Gene CD44, Length 862 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD44-204ENST00000279452 C11orf42Q8N5U0 333 aa5.32□□□□□ -1.56
CD44-204ENST00000279452 OR56B1Q8NGI3 324 aa5.32□□□□□ -1.56
CD44-204ENST00000279452 OR10V1Q8NGI7 309 aa5.32□□□□□ -1.56
CD44-204ENST00000279452 OR10X1Q8NGY0 326 aa5.32□□□□□ -1.56
CD44-204ENST00000279452 ZNF596Q8TC21 504 aa5.32□□□□□ -1.56
CD44-204ENST00000279452 C17orf50Q8WW18 174 aa5.32□□□□□ -1.56
CD44-204ENST00000279452 IL1F10Q8WWZ1 152 aa5.32□□□□□ -1.56
CD44-204ENST00000279452 CORO2AQ92828 525 aa5.32□□□□□ -1.56
CD44-204ENST00000279452 ARL11Q969Q4 196 aa5.32□□□□□ -1.56
CD44-204ENST00000279452 PHF21AQ96BD5 680 aa5.32□□□□□ -1.56
CD44-204ENST00000279452 MDFIQ99750 246 aa5.32□□□□□ -1.56
CD44-204ENST00000279452 SULT4A1Q9BR01 284 aa5.32□□□□□ -1.56
CD44-204ENST00000279452 FAAP24Q9BTP7 215 aa5.32□□□□□ -1.56
CD44-204ENST00000279452 MRPS26Q9BYN8 205 aaKnown RBP5.32□□□□□ -1.56
CD44-204ENST00000279452 CHIAQ9BZP6 476 aa5.32□□□□□ -1.56
CD44-204ENST00000279452 LPAR5Q9H1C0 372 aa5.32□□□□□ -1.56
CD44-204ENST00000279452 ZMAT3Q9HA38 289 aaKnown RBP5.32□□□□□ -1.56
CD44-204ENST00000279452 ZNF286AQ9HBT8 521 aa5.32□□□□□ -1.56
CD44-204ENST00000279452 RAB9BQ9NP90 201 aa5.32□□□□□ -1.56
CD44-204ENST00000279452 ABRACLQ9P1F3 81 aa5.32□□□□□ -1.56
CD44-204ENST00000279452 ZNRD1Q9P1U0 126 aa5.32□□□□□ -1.56
CD44-204ENST00000279452 RCC2Q9P258 522 aaKnown RBP5.32□□□□□ -1.56
CD44-204ENST00000279452 GNG12Q9UBI6 72 aa5.32□□□□□ -1.56
CD44-204ENST00000279452 TBL2Q9Y4P3 447 aaKnown RBP5.32□□□□□ -1.56
CD44-204ENST00000279452 MALRD1Q5VYJ5 2156 aa5.32□□□□□ -1.56
CD44-204ENST00000279452 VPS13CQ709C8 3753 aa5.32□□□□□ -1.56
CD44-204ENST00000279452 CSPG4Q6UVK1 2322 aa5.31□□□□□ -1.56
CD44-204ENST00000279452 A0A0A6YYD4 124 aa5.31□□□□□ -1.56
CD44-204ENST00000279452 A0A1W2PPE3 182 aa5.31□□□□□ -1.56
CD44-204ENST00000279452 METTL21EPA6NDL7 271 aa5.31□□□□□ -1.56
CD44-204ENST00000279452 C12orf77C9JDV5 145 aa5.31□□□□□ -1.56
CD44-204ENST00000279452 H3BUX3 64 aa5.31□□□□□ -1.56
CD44-204ENST00000279452 F2RL2O00254 374 aa5.31□□□□□ -1.56
CD44-204ENST00000279452 CA11O75493 328 aa5.31□□□□□ -1.56
CD44-204ENST00000279452 MT-ND4P03905 459 aa5.31□□□□□ -1.56
CD44-204ENST00000279452 RNASE1P07998 156 aaKnown RBP5.31□□□□□ -1.56
CD44-204ENST00000279452 CD3GP09693 182 aa5.31□□□□□ -1.56
CD44-204ENST00000279452 SMIM18P0DKX4 95 aa5.31□□□□□ -1.56
CD44-204ENST00000279452 SNRPBP14678 240 aaKnown RBP5.31□□□□□ -1.56
CD44-204ENST00000279452 RCC1P18754 421 aaPredicted RBP5.31□□□□□ -1.56
CD44-204ENST00000279452 GZMHP20718 246 aa5.31□□□□□ -1.56
CD44-204ENST00000279452 HTR1DP28221 377 aa5.31□□□□□ -1.56
CD44-204ENST00000279452 TGFBR1P36897 503 aa5.31□□□□□ -1.56
CD44-204ENST00000279452 CEACAM3P40198 252 aa5.31□□□□□ -1.56
CD44-204ENST00000279452 SERPINB10P48595 397 aa5.31□□□□□ -1.56
CD44-204ENST00000279452 ARHGDIBP52566 201 aa5.31□□□□□ -1.56
CD44-204ENST00000279452 EFNB2P52799 333 aa5.31□□□□□ -1.56
CD44-204ENST00000279452 PRRX1P54821 245 aa5.31□□□□□ -1.56
CD44-204ENST00000279452 QRFPP83859 136 aa5.31□□□□□ -1.56
CD44-204ENST00000279452 PLA2G7Q13093 441 aa5.31□□□□□ -1.56
CD44-204ENST00000279452 ZNF626Q68DY1 528 aa5.31□□□□□ -1.56
CD44-204ENST00000279452 SIGIRRQ6IA17 410 aa5.31□□□□□ -1.56
CD44-204ENST00000279452 TRAT1Q6PIZ9 186 aa5.31□□□□□ -1.56
CD44-204ENST00000279452 C12orf54Q6X4T0 127 aa5.31□□□□□ -1.56
CD44-204ENST00000279452 Q6ZTK2 550 aa5.31□□□□□ -1.56
CD44-204ENST00000279452 GPR141Q7Z602 305 aa5.31□□□□□ -1.56
CD44-204ENST00000279452 RTN4RL2Q86UN3 420 aa5.31□□□□□ -1.56
CD44-204ENST00000279452 NR2C2APQ86WQ0 139 aa5.31□□□□□ -1.56
CD44-204ENST00000279452 LDLRAD3Q86YD5 345 aa5.31□□□□□ -1.56
CD44-204ENST00000279452 BEND2Q8NDZ0 799 aa5.31□□□□□ -1.56
CD44-204ENST00000279452 OR11H6Q8NGC7 330 aa5.31□□□□□ -1.56
CD44-204ENST00000279452 OR9G1Q8NH87 305 aa5.31□□□□□ -1.56
CD44-204ENST00000279452 LGALS14Q8TCE9 139 aa5.31□□□□□ -1.56
CD44-204ENST00000279452 FAM216AQ8WUB2 273 aa5.31□□□□□ -1.56
CD44-204ENST00000279452 ZFAND2BQ8WV99 257 aa5.31□□□□□ -1.56
CD44-204ENST00000279452 TAF15Q92804 592 aaKnown RBP eCLIP5.31□□□□□ -1.56
CD44-204ENST00000279452 TOMM40LQ969M1 308 aa5.31□□□□□ -1.56
CD44-204ENST00000279452 RAB3CQ96E17 227 aa5.31□□□□□ -1.56
CD44-204ENST00000279452 YIPF6Q96EC8 236 aa5.31□□□□□ -1.56
CD44-204ENST00000279452 ARHGAP5-AS1Q96IT6 56 aa5.31□□□□□ -1.56
CD44-204ENST00000279452 KIRREL1Q96J84 757 aa5.31□□□□□ -1.56
CD44-204ENST00000279452 CYYR1Q96J86 154 aa5.31□□□□□ -1.56
CD44-204ENST00000279452 SSX3Q99909 188 aa5.31□□□□□ -1.56
CD44-204ENST00000279452 CMSS1Q9BQ75 279 aaKnown RBP5.31□□□□□ -1.56
CD44-204ENST00000279452 FUNDC2Q9BWH2 189 aa5.31□□□□□ -1.56
CD44-204ENST00000279452 TM2D1Q9BX74 207 aa5.31□□□□□ -1.56
CD44-204ENST00000279452 TAF9BQ9HBM6 251 aa5.31□□□□□ -1.56
CD44-204ENST00000279452 C12orf4Q9NQ89 552 aa5.31□□□□□ -1.56
CD44-204ENST00000279452 AK3Q9UIJ7 227 aa5.31□□□□□ -1.56
CD44-204ENST00000279452 RAB22AQ9UL26 194 aa5.31□□□□□ -1.56
CD44-204ENST00000279452 AMMECR1Q9Y4X0 333 aaPredicted RBP5.31□□□□□ -1.56
CD44-204ENST00000279452 POMT1Q9Y6A1 747 aa5.31□□□□□ -1.56
CD44-204ENST00000279452 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP5.3□□□□□ -1.56
CD44-204ENST00000279452 FAM181BA6NEQ2 426 aa5.3□□□□□ -1.56
CD44-204ENST00000279452 ODF3BA8MYP8 253 aa5.3□□□□□ -1.56
CD44-204ENST00000279452 LEUTXA8MZ59 168 aa5.3□□□□□ -1.56
CD44-204ENST00000279452 CLDN34H7C241 214 aa5.3□□□□□ -1.56
CD44-204ENST00000279452 HSPA12AO43301 675 aa5.3□□□□□ -1.56
CD44-204ENST00000279452 ORC5O43913 435 aa5.3□□□□□ -1.56
CD44-204ENST00000279452 GPR137BO60478 399 aa5.3□□□□□ -1.56
CD44-204ENST00000279452 NOL3O60936 208 aaKnown RBP5.3□□□□□ -1.56
CD44-204ENST00000279452 HBZP02008 142 aa5.3□□□□□ -1.56
CD44-204ENST00000279452 GLAP06280 429 aa5.3□□□□□ -1.56
CD44-204ENST00000279452 GNB3P16520 340 aa5.3□□□□□ -1.56
CD44-204ENST00000279452 JUNBP17275 347 aaPredicted RBP5.3□□□□□ -1.56
CD44-204ENST00000279452 RAB6AP20340 208 aa5.3□□□□□ -1.56
CD44-204ENST00000279452 TALDO1P37837 337 aa5.3□□□□□ -1.56
CD44-204ENST00000279452 MNDAP41218 407 aa5.3□□□□□ -1.56
CD44-204ENST00000279452 IER3P46695 156 aa5.3□□□□□ -1.56
CD44-204ENST00000279452 RAB13P51153 203 aa5.3□□□□□ -1.56
Retrieved 100 of 20,778 RNA–protein pairs in 75.9 ms