RNA–Protein interactions for RNA: ENST00000539661.5

RAB40C-205, Transcript of RAB40C, member RAS oncogene family, humanhuman

APPRIS P1 TSL 3 BASIC

Gene RAB40C, Length 2,609 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB40C-205ENST00000539661 PYGO2Q9BRQ0 406 aa15.17■□□□□ 0.02
RAB40C-205ENST00000539661 FER1L5A0AVI2 2057 aa15.17■□□□□ 0.02
RAB40C-205ENST00000539661 IGLV3-12A0A075B6K2 115 aa15.17■□□□□ 0.02
RAB40C-205ENST00000539661 PIGBOS1A0A0B4J2F0 54 aa15.17■□□□□ 0.02
RAB40C-205ENST00000539661 AMBPP02760 352 aa15.17■□□□□ 0.02
RAB40C-205ENST00000539661 ZNF787Q6DD87 383 aa15.17■□□□□ 0.02
RAB40C-205ENST00000539661 Q6ZPA2 131 aa15.17■□□□□ 0.02
RAB40C-205ENST00000539661 TGIF2LYQ8IUE0 185 aa15.17■□□□□ 0.02
RAB40C-205ENST00000539661 TMEM123Q8N131 208 aa15.17■□□□□ 0.02
RAB40C-205ENST00000539661 CA5BP1Q8WTZ4 195 aa15.17■□□□□ 0.02
RAB40C-205ENST00000539661 LRFN1Q9P244 771 aa15.17■□□□□ 0.02
RAB40C-205ENST00000539661 ZNF391Q9UJN7 358 aa15.17■□□□□ 0.02
RAB40C-205ENST00000539661 RNF115Q9Y4L5 304 aa15.17■□□□□ 0.02
RAB40C-205ENST00000539661 ATXN7O15265 892 aaPredicted RBP15.16■□□□□ 0.02
RAB40C-205ENST00000539661 PIAS2O75928 621 aa15.16■□□□□ 0.02
RAB40C-205ENST00000539661 OR2J2O76002 312 aa15.16■□□□□ 0.02
RAB40C-205ENST00000539661 RAB35Q15286 201 aa15.16■□□□□ 0.02
RAB40C-205ENST00000539661 RAB30Q15771 203 aa15.16■□□□□ 0.02
RAB40C-205ENST00000539661 DEFB133Q30KQ1 61 aa15.16■□□□□ 0.02
RAB40C-205ENST00000539661 SLC25A26Q70HW3 274 aa15.16■□□□□ 0.02
RAB40C-205ENST00000539661 THNSL2Q86YJ6 484 aa15.16■□□□□ 0.02
RAB40C-205ENST00000539661 OR10G3Q8NGC4 313 aa15.16■□□□□ 0.02
RAB40C-205ENST00000539661 ZNF501Q96CX3 271 aaPredicted RBP15.16■□□□□ 0.02
RAB40C-205ENST00000539661 SLC7A10Q9NS82 523 aa15.16■□□□□ 0.02
RAB40C-205ENST00000539661 IGHV1OR21-1A0A087WYE8 117 aa15.16■□□□□ 0.02
RAB40C-205ENST00000539661 VAMP5O95183 116 aa15.16■□□□□ 0.02
RAB40C-205ENST00000539661 NRASP01111 189 aa15.16■□□□□ 0.02
RAB40C-205ENST00000539661 PAX9P55771 341 aa15.16■□□□□ 0.02
RAB40C-205ENST00000539661 RBM11P57052 281 aaKnown RBP15.16■□□□□ 0.02
RAB40C-205ENST00000539661 FAM27BQ5VT28 67 aa15.16■□□□□ 0.02
RAB40C-205ENST00000539661 ZNF664Q8N3J9 261 aa15.16■□□□□ 0.02
RAB40C-205ENST00000539661 FADS6Q8N9I5 356 aa15.16■□□□□ 0.02
RAB40C-205ENST00000539661 DNASE2BQ8WZ79 361 aa15.16■□□□□ 0.02
RAB40C-205ENST00000539661 ZNF442Q9H7R0 627 aa15.16■□□□□ 0.02
RAB40C-205ENST00000539661 VAX2Q9UIW0 290 aa15.16■□□□□ 0.02
RAB40C-205ENST00000539661 LMO7DNF2Z398 122 aa15.15■□□□□ 0.02
RAB40C-205ENST00000539661 TCAPO15273 167 aa15.15■□□□□ 0.02
RAB40C-205ENST00000539661 FUT6P51993 359 aa15.15■□□□□ 0.02
RAB40C-205ENST00000539661 OR1D5P58170 312 aa15.15■□□□□ 0.02
RAB40C-205ENST00000539661 PMS2P11Q13670 270 aa15.15■□□□□ 0.02
RAB40C-205ENST00000539661 RNPS1Q15287 305 aaKnown RBP15.15■□□□□ 0.02
RAB40C-205ENST00000539661 SPIN3Q5JUX0 258 aa15.15■□□□□ 0.02
RAB40C-205ENST00000539661 KMT5CQ86Y97 462 aa15.15■□□□□ 0.02
RAB40C-205ENST00000539661 MAML2Q8IZL2 1156 aaPredicted RBP15.15■□□□□ 0.02
RAB40C-205ENST00000539661 OR5D13Q8NGL4 314 aa15.15■□□□□ 0.02
RAB40C-205ENST00000539661 PSMG3Q9BT73 122 aaPredicted RBP15.15■□□□□ 0.02
RAB40C-205ENST00000539661 RBM24Q9BX46 236 aaKnown RBP15.15■□□□□ 0.02
RAB40C-205ENST00000539661 P4HTMQ9NXG6 502 aa15.15■□□□□ 0.02
RAB40C-205ENST00000539661 ZFP92A6NM28 416 aa15.15■□□□□ 0.02
RAB40C-205ENST00000539661 IFNA1P01562 189 aa15.15■□□□□ 0.02
RAB40C-205ENST00000539661 NUTF2P61970 127 aaKnown RBP15.15■□□□□ 0.02
RAB40C-205ENST00000539661 MRPS34P82930 218 aaKnown RBP15.15■□□□□ 0.02
RAB40C-205ENST00000539661 MPV17LQ2QL34 196 aa15.15■□□□□ 0.02
RAB40C-205ENST00000539661 MRGPRGQ86SM5 289 aa15.15■□□□□ 0.02
RAB40C-205ENST00000539661 OR2AE1Q8NHA4 323 aa15.15■□□□□ 0.02
RAB40C-205ENST00000539661 ACY3Q96HD9 319 aa15.15■□□□□ 0.02
RAB40C-205ENST00000539661 AGMATQ9BSE5 352 aa15.15■□□□□ 0.02
RAB40C-205ENST00000539661 TK1P04183 234 aa15.14■□□□□ 0.01
RAB40C-205ENST00000539661 SLC25A6P12236 298 aa15.14■□□□□ 0.01
RAB40C-205ENST00000539661 USF2Q15853 346 aaPredicted RBP15.14■□□□□ 0.01
RAB40C-205ENST00000539661 FAM69BQ5VUD6 431 aa15.14■□□□□ 0.01
RAB40C-205ENST00000539661 SLC25A24Q6NUK1 477 aa15.14■□□□□ 0.01
RAB40C-205ENST00000539661 TGIF2LXQ8IUE1 241 aa15.14■□□□□ 0.01
RAB40C-205ENST00000539661 TECTBQ96PL2 329 aa15.14■□□□□ 0.01
RAB40C-205ENST00000539661 RPRMQ9NS64 109 aa15.14■□□□□ 0.01
RAB40C-205ENST00000539661 FGF21Q9NSA1 209 aa15.14■□□□□ 0.01
RAB40C-205ENST00000539661 SHANK1Q9Y566 2161 aa15.14■□□□□ 0.01
RAB40C-205ENST00000539661 FAM90A10PA6NDY2 464 aa15.14■□□□□ 0.01
RAB40C-205ENST00000539661 FAM90A18PA6NE21 464 aa15.14■□□□□ 0.01
RAB40C-205ENST00000539661 FAM90A16PA6NEW6 464 aa15.14■□□□□ 0.01
RAB40C-205ENST00000539661 FAM90A20PA6NIJ5 464 aa15.14■□□□□ 0.01
RAB40C-205ENST00000539661 FAM90A8PA6NJQ4 464 aa15.14■□□□□ 0.01
RAB40C-205ENST00000539661 FAM90A7PA6NKC0 464 aa15.14■□□□□ 0.01
RAB40C-205ENST00000539661 FAM90A22PA8MWA6 464 aa15.14■□□□□ 0.01
RAB40C-205ENST00000539661 FAM90A12PA8MX19 464 aa15.14■□□□□ 0.01
RAB40C-205ENST00000539661 FAM90A5PA8MXJ8 464 aa15.14■□□□□ 0.01
RAB40C-205ENST00000539661 FAM90A23PA8MXZ1 464 aa15.14■□□□□ 0.01
RAB40C-205ENST00000539661 DUX1O43812 170 aa15.14■□□□□ 0.01
RAB40C-205ENST00000539661 FAM90A15PP0C7V4 464 aa15.14■□□□□ 0.01
RAB40C-205ENST00000539661 FAM90A13PP0C7W8 464 aa15.14■□□□□ 0.01
RAB40C-205ENST00000539661 FAM90A14PP0C7W9 464 aa15.14■□□□□ 0.01
RAB40C-205ENST00000539661 FAM90A24PP0C7X0 464 aa15.14■□□□□ 0.01
RAB40C-205ENST00000539661 CD38P28907 300 aa15.14■□□□□ 0.01
RAB40C-205ENST00000539661 PDLIM4P50479 330 aa15.14■□□□□ 0.01
RAB40C-205ENST00000539661 FOXL2P58012 376 aa15.14■□□□□ 0.01
RAB40C-205ENST00000539661 CFHR1Q03591 330 aa15.14■□□□□ 0.01
RAB40C-205ENST00000539661 ZNF818PQ6ZRF7 136 aa15.14■□□□□ 0.01
RAB40C-205ENST00000539661 ZNF576Q9H609 170 aa15.14■□□□□ 0.01
RAB40C-205ENST00000539661 ZNF665Q9H7R5 613 aa15.14■□□□□ 0.01
RAB40C-205ENST00000539661 DCAF16Q9NXF7 216 aa15.14■□□□□ 0.01
RAB40C-205ENST00000539661 MYOTQ9UBF9 498 aa15.14■□□□□ 0.01
RAB40C-205ENST00000539661 NAT8Q9UHE5 227 aa15.14■□□□□ 0.01
RAB40C-205ENST00000539661 SPAG17Q6Q759 2223 aa15.14■□□□□ 0.01
RAB40C-205ENST00000539661 NPIPA2E9PIF3 369 aa15.13■□□□□ 0.01
RAB40C-205ENST00000539661 NPIPA3F8WFD2 350 aa15.13■□□□□ 0.01
RAB40C-205ENST00000539661 H0Y980 276 aa15.13■□□□□ 0.01
RAB40C-205ENST00000539661 ZFAND5O76080 213 aa15.13■□□□□ 0.01
RAB40C-205ENST00000539661 PFN1P07737 140 aaKnown RBP15.13■□□□□ 0.01
RAB40C-205ENST00000539661 SLC10A1Q14973 349 aa15.13■□□□□ 0.01
RAB40C-205ENST00000539661 CDCP2Q5VXM1 449 aa15.13■□□□□ 0.01
Retrieved 100 of 20,778 RNA–protein pairs in 82.4 ms