RNA–Protein interactions for RNA: ENST00000483956.1

SEC61A1-205, Transcript of Sec61 translocon alpha 1 subunit, humanhuman

TSL 1 (best)

Gene SEC61A1, Length 3,046 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC61A1-205ENST00000483956 ZNF878C9JN71 531 aa10.03□□□□□ -0.8
SEC61A1-205ENST00000483956 HOXC12P31275 282 aa10.03□□□□□ -0.8
SEC61A1-205ENST00000483956 GALR1P47211 349 aa10.03□□□□□ -0.8
SEC61A1-205ENST00000483956 CSNK2A1P68400 391 aaPredicted RBP10.03□□□□□ -0.8
SEC61A1-205ENST00000483956 RUNX1Q01196 453 aa10.03□□□□□ -0.8
SEC61A1-205ENST00000483956 CSNK2A3Q8NEV1 391 aa10.03□□□□□ -0.8
SEC61A1-205ENST00000483956 OR51G1Q8NGK1 321 aa10.03□□□□□ -0.8
SEC61A1-205ENST00000483956 OR52M1Q8NGK5 317 aa10.03□□□□□ -0.8
SEC61A1-205ENST00000483956 RBMXL1Q96E39 390 aaKnown RBP10.03□□□□□ -0.8
SEC61A1-205ENST00000483956 ARHGAP5-AS1Q96IT6 56 aa10.03□□□□□ -0.8
SEC61A1-205ENST00000483956 FOXI3A8MTJ6 420 aaPredicted RBP10.02□□□□□ -0.8
SEC61A1-205ENST00000483956 SUMO3P55854 103 aaPredicted RBP10.02□□□□□ -0.8
SEC61A1-205ENST00000483956 ACOT6Q3I5F7 207 aaPredicted RBP10.02□□□□□ -0.8
SEC61A1-205ENST00000483956 FBXL14Q8N1E6 418 aa10.02□□□□□ -0.8
SEC61A1-205ENST00000483956 OR10G4Q8NGN3 311 aa10.02□□□□□ -0.8
SEC61A1-205ENST00000483956 SPACA5Q96QH8 159 aa10.02□□□□□ -0.8
SEC61A1-205ENST00000483956 MRPL13Q9BYD1 178 aaKnown RBP10.02□□□□□ -0.8
SEC61A1-205ENST00000483956 LHFPL6Q9Y693 200 aa10.02□□□□□ -0.8
SEC61A1-205ENST00000483956 MYO15AQ9UKN7 3530 aa10.02□□□□□ -0.81
SEC61A1-205ENST00000483956 TNFSF12-TNFSF13A0A0A6YY99 330 aa10.02□□□□□ -0.81
SEC61A1-205ENST00000483956 FAM24AA6NFZ4 105 aa10.02□□□□□ -0.81
SEC61A1-205ENST00000483956 LINC01565O15544 149 aa10.02□□□□□ -0.81
SEC61A1-205ENST00000483956 IGLV3-19P01714 112 aa10.02□□□□□ -0.81
SEC61A1-205ENST00000483956 ATXN8OSP0DMR3 200 aa10.02□□□□□ -0.81
SEC61A1-205ENST00000483956 GLI4P10075 376 aa10.02□□□□□ -0.81
SEC61A1-205ENST00000483956 CD46P15529 392 aa10.02□□□□□ -0.81
SEC61A1-205ENST00000483956 CDKN1AP38936 164 aa10.02□□□□□ -0.81
SEC61A1-205ENST00000483956 ZNF92Q03936 586 aa10.02□□□□□ -0.81
SEC61A1-205ENST00000483956 ARFRP1Q13795 201 aa10.02□□□□□ -0.81
SEC61A1-205ENST00000483956 NSDHLQ15738 373 aa10.02□□□□□ -0.81
SEC61A1-205ENST00000483956 UNQ5815/PRO19632Q6UWF5 114 aa10.02□□□□□ -0.81
SEC61A1-205ENST00000483956 Q6ZWC4 215 aa10.02□□□□□ -0.81
SEC61A1-205ENST00000483956 LYZL2Q7Z4W2 148 aa10.02□□□□□ -0.81
SEC61A1-205ENST00000483956 CALHM1Q8IU99 346 aa10.02□□□□□ -0.81
SEC61A1-205ENST00000483956 OR4C5Q8NGB2 326 aa10.02□□□□□ -0.81
SEC61A1-205ENST00000483956 TMEM171Q8WVE6 324 aa10.02□□□□□ -0.81
SEC61A1-205ENST00000483956 RASL10BQ96S79 203 aa10.02□□□□□ -0.81
SEC61A1-205ENST00000483956 TMEM106BQ9NUM4 274 aa10.02□□□□□ -0.81
SEC61A1-205ENST00000483956 ALKBH4Q9NXW9 302 aa10.02□□□□□ -0.81
SEC61A1-205ENST00000483956 EXPH5Q8NEV8 1989 aa10.02□□□□□ -0.81
SEC61A1-205ENST00000483956 WDR87Q6ZQQ6 2873 aa10.02□□□□□ -0.81
SEC61A1-205ENST00000483956 TOMM40O96008 361 aa10.01□□□□□ -0.81
SEC61A1-205ENST00000483956 TMEM225BP0DP42 221 aa10.01□□□□□ -0.81
SEC61A1-205ENST00000483956 ZNF17P17021 662 aa10.01□□□□□ -0.81
SEC61A1-205ENST00000483956 ECI1P42126 302 aa10.01□□□□□ -0.81
SEC61A1-205ENST00000483956 SNU13P55769 128 aaKnown RBP10.01□□□□□ -0.81
SEC61A1-205ENST00000483956 BIDP55957 195 aa10.01□□□□□ -0.81
SEC61A1-205ENST00000483956 RANP62826 216 aaKnown RBP10.01□□□□□ -0.81
SEC61A1-205ENST00000483956 RTP5Q14D33 572 aa10.01□□□□□ -0.81
SEC61A1-205ENST00000483956 SULF2Q8IWU5 870 aa10.01□□□□□ -0.81
SEC61A1-205ENST00000483956 VN1R17PQ8TDU5 208 aa10.01□□□□□ -0.81
SEC61A1-205ENST00000483956 DDIT4LQ96D03 193 aa10.01□□□□□ -0.81
SEC61A1-205ENST00000483956 OR10A2Q9H208 303 aa10.01□□□□□ -0.81
SEC61A1-205ENST00000483956 BANF2Q9H503 90 aa10.01□□□□□ -0.81
SEC61A1-205ENST00000483956 ZNF552Q9H707 407 aaPredicted RBP10.01□□□□□ -0.81
SEC61A1-205ENST00000483956 A0A1W2PP11 408 aa10.01□□□□□ -0.81
SEC61A1-205ENST00000483956 LIPT2A6NK58 231 aa10.01□□□□□ -0.81
SEC61A1-205ENST00000483956 LILRA1O75019 489 aa10.01□□□□□ -0.81
SEC61A1-205ENST00000483956 DPPA3Q6W0C5 159 aa10.01□□□□□ -0.81
SEC61A1-205ENST00000483956 ABHD12BQ7Z5M8 362 aaPredicted RBP10.01□□□□□ -0.81
SEC61A1-205ENST00000483956 LINC01551Q86U37 167 aa10.01□□□□□ -0.81
SEC61A1-205ENST00000483956 OR8B12Q8NGG6 310 aa10.01□□□□□ -0.81
SEC61A1-205ENST00000483956 MOB3AQ96BX8 217 aa10.01□□□□□ -0.81
SEC61A1-205ENST00000483956 MMP17Q9ULZ9 603 aa10.01□□□□□ -0.81
SEC61A1-205ENST00000483956 ZNF320A2RRD8 509 aa10.01□□□□□ -0.81
SEC61A1-205ENST00000483956 EN2P19622 333 aaPredicted RBP10.01□□□□□ -0.81
SEC61A1-205ENST00000483956 CSNK1A1P48729 337 aa10.01□□□□□ -0.81
SEC61A1-205ENST00000483956 ZNF266Q14584 549 aa10.01□□□□□ -0.81
SEC61A1-205ENST00000483956 FBXW12Q6X9E4 464 aa10.01□□□□□ -0.81
SEC61A1-205ENST00000483956 TMPRSS7Q7RTY8 843 aa10.01□□□□□ -0.81
SEC61A1-205ENST00000483956 KLHDC7BQ96G42 594 aa10.01□□□□□ -0.81
SEC61A1-205ENST00000483956 BOD1Q96IK1 185 aa10.01□□□□□ -0.81
SEC61A1-205ENST00000483956 OR5B12Q96R08 314 aa10.01□□□□□ -0.81
SEC61A1-205ENST00000483956 ZNF665Q9H7R5 613 aa10.01□□□□□ -0.81
SEC61A1-205ENST00000483956 OR6C3Q9NZP0 311 aa10.01□□□□□ -0.81
SEC61A1-205ENST00000483956 TRAV39A0A0B4J263 110 aa10□□□□□ -0.81
SEC61A1-205ENST00000483956 H7BYZ3 331 aa10□□□□□ -0.81
SEC61A1-205ENST00000483956 GCH1P30793 250 aa10□□□□□ -0.81
SEC61A1-205ENST00000483956 LDLRAD2Q5SZI1 272 aa10□□□□□ -0.81
SEC61A1-205ENST00000483956 DOK3Q7L591 496 aa10□□□□□ -0.81
SEC61A1-205ENST00000483956 CPEB2Q7Z5Q1 589 aaKnown RBP10□□□□□ -0.81
SEC61A1-205ENST00000483956 TOMM40LQ969M1 308 aa10□□□□□ -0.81
SEC61A1-205ENST00000483956 CLUHP3Q96NS8 147 aa10□□□□□ -0.81
SEC61A1-205ENST00000483956 TRIOBPQ9H2D6 2365 aa10□□□□□ -0.81
SEC61A1-205ENST00000483956 KNL1Q8NG31 2342 aa10□□□□□ -0.81
SEC61A1-205ENST00000483956 LOC102724200A0A096LPH7 203 aaPredicted RBP10□□□□□ -0.81
SEC61A1-205ENST00000483956 IGSF23A1L1A6 192 aa10□□□□□ -0.81
SEC61A1-205ENST00000483956 MAP1LC3B2A6NCE7 125 aa10□□□□□ -0.81
SEC61A1-205ENST00000483956 SERPINE3A8MV23 424 aa10□□□□□ -0.81
SEC61A1-205ENST00000483956 ST8SIA3O43173 380 aa10□□□□□ -0.81
SEC61A1-205ENST00000483956 FBLP22087 321 aaKnown RBP10□□□□□ -0.81
SEC61A1-205ENST00000483956 SFTPDP35247 375 aa10□□□□□ -0.81
SEC61A1-205ENST00000483956 ZNF121P58317 390 aaPredicted RBP10□□□□□ -0.81
SEC61A1-205ENST00000483956 RPL19P84098 196 aaKnown RBP10□□□□□ -0.81
SEC61A1-205ENST00000483956 C17orf67Q0P5P2 114 aa10□□□□□ -0.81
SEC61A1-205ENST00000483956 IL13RA2Q14627 380 aa10□□□□□ -0.81
SEC61A1-205ENST00000483956 FBLN7Q53RD9 439 aa10□□□□□ -0.81
SEC61A1-205ENST00000483956 C17orf82Q86X59 251 aaPredicted RBP10□□□□□ -0.81
SEC61A1-205ENST00000483956 CORO2AQ92828 525 aa10□□□□□ -0.81
SEC61A1-205ENST00000483956 RNF2Q99496 336 aa10□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 80.8 ms