RNA–Protein interactions for RNA: ENST00000452162.5

PKP4-206, Transcript of plakophilin 4, humanhuman

TSL 1 (best)

Gene PKP4, Length 2,359 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PKP4-206ENST00000452162 IDH3GP51553 393 aaPredicted RBP9.1□□□□□ -0.95
PKP4-206ENST00000452162 UCP3P55916 312 aa9.1□□□□□ -0.95
PKP4-206ENST00000452162 PIGPP57054 158 aa9.1□□□□□ -0.95
PKP4-206ENST00000452162 RBM39Q14498 530 aaKnown RBP9.1□□□□□ -0.95
PKP4-206ENST00000452162 BEX5Q5H9J7 111 aa9.1□□□□□ -0.95
PKP4-206ENST00000452162 LINC00596Q86U02 117 aa9.1□□□□□ -0.95
PKP4-206ENST00000452162 INO80EQ8NBZ0 244 aaPredicted RBP9.1□□□□□ -0.95
PKP4-206ENST00000452162 ANGPTL6Q8NI99 470 aa9.1□□□□□ -0.95
PKP4-206ENST00000452162 DCUN1D4Q92564 292 aa9.1□□□□□ -0.95
PKP4-206ENST00000452162 TOMM40LQ969M1 308 aa9.1□□□□□ -0.95
PKP4-206ENST00000452162 CXorf58Q96LI9 332 aa9.1□□□□□ -0.95
PKP4-206ENST00000452162 REG4Q9BYZ8 158 aa9.1□□□□□ -0.95
PKP4-206ENST00000452162 PLK3Q9H4B4 646 aa9.1□□□□□ -0.95
PKP4-206ENST00000452162 PLSCR4Q9NRQ2 329 aa9.1□□□□□ -0.95
PKP4-206ENST00000452162 TEX13DA0A0J9YY54 714 aaPredicted RBP9.09□□□□□ -0.95
PKP4-206ENST00000452162 HOXB5P09067 269 aa9.09□□□□□ -0.95
PKP4-206ENST00000452162 HOXB1P14653 301 aaPredicted RBP9.09□□□□□ -0.95
PKP4-206ENST00000452162 IL32P24001 234 aa9.09□□□□□ -0.95
PKP4-206ENST00000452162 GLP1RP43220 463 aa9.09□□□□□ -0.95
PKP4-206ENST00000452162 PPP1CBP62140 327 aa9.09□□□□□ -0.95
PKP4-206ENST00000452162 FBXL19-AS1Q494R0 122 aa9.09□□□□□ -0.95
PKP4-206ENST00000452162 PRSS54Q6PEW0 395 aa9.09□□□□□ -0.95
PKP4-206ENST00000452162 C1orf162Q8NEQ5 155 aaPredicted RBP9.09□□□□□ -0.95
PKP4-206ENST00000452162 SUN5Q8TC36 379 aa9.09□□□□□ -0.95
PKP4-206ENST00000452162 RRNAD1Q96FB5 475 aaKnown RBP9.09□□□□□ -0.95
PKP4-206ENST00000452162 ZNF488Q96MN9 340 aa9.09□□□□□ -0.95
PKP4-206ENST00000452162 NAA60Q9H7X0 242 aa9.09□□□□□ -0.95
PKP4-206ENST00000452162 CDH20Q9HBT6 801 aa9.09□□□□□ -0.95
PKP4-206ENST00000452162 Q9N2K0 584 aa9.09□□□□□ -0.95
PKP4-206ENST00000452162 UNC79Q9P2D8 2635 aa9.09□□□□□ -0.95
PKP4-206ENST00000452162 hCG_1807616A0A1W2PRN6 198 aa9.09□□□□□ -0.95
PKP4-206ENST00000452162 POM121CA8CG34 1229 aa9.09□□□□□ -0.95
PKP4-206ENST00000452162 J3QT63 122 aa9.09□□□□□ -0.95
PKP4-206ENST00000452162 KCNAB3O43448 404 aa9.09□□□□□ -0.95
PKP4-206ENST00000452162 PRKACAP17612 351 aa9.09□□□□□ -0.95
PKP4-206ENST00000452162 AADACP22760 399 aa9.09□□□□□ -0.95
PKP4-206ENST00000452162 LUMP51884 338 aaPredicted RBP9.09□□□□□ -0.95
PKP4-206ENST00000452162 FXYD4P59646 89 aa9.09□□□□□ -0.95
PKP4-206ENST00000452162 IL13RA2Q14627 380 aa9.09□□□□□ -0.95
PKP4-206ENST00000452162 TSC22D1Q15714 1073 aa9.09□□□□□ -0.95
PKP4-206ENST00000452162 SLC38A6Q8IZM9 456 aa9.09□□□□□ -0.95
PKP4-206ENST00000452162 WDR31Q8NA23 367 aa9.09□□□□□ -0.95
PKP4-206ENST00000452162 RNASE6Q93091 150 aaKnown RBP9.09□□□□□ -0.95
PKP4-206ENST00000452162 GALNT14Q96FL9 552 aa9.09□□□□□ -0.95
PKP4-206ENST00000452162 RSRP1Q9BUV0 290 aa9.09□□□□□ -0.95
PKP4-206ENST00000452162 OR2J1Q9GZK6 312 aa9.09□□□□□ -0.95
PKP4-206ENST00000452162 OR5AC2Q9NZP5 309 aa9.09□□□□□ -0.95
PKP4-206ENST00000452162 CBR1P16152 277 aa9.08□□□□□ -0.96
PKP4-206ENST00000452162 IGFBP2P18065 325 aa9.08□□□□□ -0.96
PKP4-206ENST00000452162 DUSP1P28562 367 aa9.08□□□□□ -0.96
PKP4-206ENST00000452162 ERVS71-1P61550 626 aa9.08□□□□□ -0.96
PKP4-206ENST00000452162 FAM27E3Q08E93 113 aa9.08□□□□□ -0.96
PKP4-206ENST00000452162 TMEM187Q14656 261 aa9.08□□□□□ -0.96
PKP4-206ENST00000452162 IGSF11Q5DX21 431 aa9.08□□□□□ -0.96
PKP4-206ENST00000452162 WDR86Q86TI4 376 aa9.08□□□□□ -0.96
PKP4-206ENST00000452162 GTF3AQ92664 365 aaKnown RBP9.08□□□□□ -0.96
PKP4-206ENST00000452162 ZNF471Q9BX82 626 aaPredicted RBP9.08□□□□□ -0.96
PKP4-206ENST00000452162 SLC2A9Q9NRM0 540 aa9.08□□□□□ -0.96
PKP4-206ENST00000452162 RASL12Q9NYN1 266 aa9.08□□□□□ -0.96
PKP4-206ENST00000452162 MFSD2BA6NFX1 497 aa9.08□□□□□ -0.96
PKP4-206ENST00000452162 RHBDL1O75783 438 aa9.08□□□□□ -0.96
PKP4-206ENST00000452162 PPYP01298 95 aa9.08□□□□□ -0.96
PKP4-206ENST00000452162 RAC2P15153 192 aa9.08□□□□□ -0.96
PKP4-206ENST00000452162 RAB32Q13637 225 aa9.08□□□□□ -0.96
PKP4-206ENST00000452162 ABCA11PQ4W5N1 156 aa9.08□□□□□ -0.96
PKP4-206ENST00000452162 FAM76BQ5HYJ3 339 aa9.08□□□□□ -0.96
PKP4-206ENST00000452162 ZNF787Q6DD87 383 aa9.08□□□□□ -0.96
PKP4-206ENST00000452162 MEX3BQ6ZN04 569 aaKnown RBP9.08□□□□□ -0.96
PKP4-206ENST00000452162 FAM58AQ8N1B3 248 aa9.08□□□□□ -0.96
PKP4-206ENST00000452162 SUMF2Q8NBJ7 301 aa9.08□□□□□ -0.96
PKP4-206ENST00000452162 OR1S1Q8NH92 325 aa9.08□□□□□ -0.96
PKP4-206ENST00000452162 SLC25A40Q8TBP6 338 aa9.08□□□□□ -0.96
PKP4-206ENST00000452162 RTN4IP1Q8WWV3 396 aaPredicted RBP9.08□□□□□ -0.96
PKP4-206ENST00000452162 RBPMSQ93062 196 aaKnown RBP9.08□□□□□ -0.96
PKP4-206ENST00000452162 MRPL24Q96A35 216 aaKnown RBP9.08□□□□□ -0.96
PKP4-206ENST00000452162 PHYHIPLQ96FC7 376 aa9.08□□□□□ -0.96
PKP4-206ENST00000452162 RTL8AQ9BWD3 113 aa9.08□□□□□ -0.96
PKP4-206ENST00000452162 SLC25A32Q9H2D1 315 aa9.08□□□□□ -0.96
PKP4-206ENST00000452162 IFT22Q9H7X7 185 aa9.08□□□□□ -0.96
PKP4-206ENST00000452162 RHOFQ9HBH0 211 aa9.08□□□□□ -0.96
PKP4-206ENST00000452162 SPACA1Q9HBV2 294 aa9.08□□□□□ -0.96
PKP4-206ENST00000452162 ABCA12Q86UK0 2595 aa9.08□□□□□ -0.96
PKP4-206ENST00000452162 ITPR2Q14571 2701 aa9.08□□□□□ -0.96
PKP4-206ENST00000452162 TRBV6-6A0A0A6YYG2 114 aa9.07□□□□□ -0.96
PKP4-206ENST00000452162 TRAV24A0A0B4J272 114 aa9.07□□□□□ -0.96
PKP4-206ENST00000452162 MSGN1A6NI15 193 aa9.07□□□□□ -0.96
PKP4-206ENST00000452162 IQCF6A8MYZ5 107 aa9.07□□□□□ -0.96
PKP4-206ENST00000452162 I3L521 148 aa9.07□□□□□ -0.96
PKP4-206ENST00000452162 IGKV3-15P01624 115 aa9.07□□□□□ -0.96
PKP4-206ENST00000452162 OR5AC1P0C628 307 aa9.07□□□□□ -0.96
PKP4-206ENST00000452162 HERV-K104P61576 105 aa9.07□□□□□ -0.96
PKP4-206ENST00000452162 PHLDA2Q53GA4 152 aa9.07□□□□□ -0.96
PKP4-206ENST00000452162 GGNBP1Q5YKI7 109 aa9.07□□□□□ -0.96
PKP4-206ENST00000452162 C5orf24Q7Z6I8 188 aa9.07□□□□□ -0.96
PKP4-206ENST00000452162 PDZD9Q8IXQ8 264 aa9.07□□□□□ -0.96
PKP4-206ENST00000452162 LILRB2Q8N423 598 aa9.07□□□□□ -0.96
PKP4-206ENST00000452162 C17orf78Q8N4C9 275 aa9.07□□□□□ -0.96
PKP4-206ENST00000452162 LRTM2Q8N967 370 aa9.07□□□□□ -0.96
PKP4-206ENST00000452162 STOML3Q8TAV4 291 aa9.07□□□□□ -0.96
PKP4-206ENST00000452162 MRPL30Q8TCC3 161 aaKnown RBP9.07□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 73 ms