RNA–Protein interactions for RNA: ENST00000419181.5

GTF3A-202, Transcript of general transcription factor IIIA, humanhuman

TSL 1 (best)

Gene GTF3A, Length 1,191 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3A-202ENST00000419181 LIPKQ5VXJ0 399 aa16.4■□□□□ 0.22
GTF3A-202ENST00000419181 AWAT2Q6E213 333 aa16.4■□□□□ 0.22
GTF3A-202ENST00000419181 LIAT1Q6ZQX7 453 aa16.4■□□□□ 0.22
GTF3A-202ENST00000419181 NDNFQ8TB73 568 aa16.4■□□□□ 0.22
GTF3A-202ENST00000419181 UFD1Q92890 307 aa16.4■□□□□ 0.22
GTF3A-202ENST00000419181 KIRREL1Q96J84 757 aa16.4■□□□□ 0.22
GTF3A-202ENST00000419181 UQCC2Q9BRT2 126 aa16.4■□□□□ 0.22
GTF3A-202ENST00000419181 LINC00574Q9H8X3 128 aa16.4■□□□□ 0.22
GTF3A-202ENST00000419181 ZNF286AQ9HBT8 521 aa16.4■□□□□ 0.22
GTF3A-202ENST00000419181 RAB18Q9NP72 206 aa16.4■□□□□ 0.22
GTF3A-202ENST00000419181 ISYNA1Q9NPH2 558 aa16.4■□□□□ 0.22
GTF3A-202ENST00000419181 CALYQ9NYX4 217 aa16.4■□□□□ 0.22
GTF3A-202ENST00000419181 FAM172BPA6NC97 362 aa16.39■□□□□ 0.21
GTF3A-202ENST00000419181 CHST1O43916 411 aa16.39■□□□□ 0.21
GTF3A-202ENST00000419181 IGLV1-47P01700 117 aa16.39■□□□□ 0.21
GTF3A-202ENST00000419181 HTR1DP28221 377 aa16.39■□□□□ 0.21
GTF3A-202ENST00000419181 RAB13P51153 203 aa16.39■□□□□ 0.21
GTF3A-202ENST00000419181 TPBGQ13641 420 aa16.39■□□□□ 0.21
GTF3A-202ENST00000419181 RBM48Q5RL73 367 aaKnown RBP16.39■□□□□ 0.21
GTF3A-202ENST00000419181 SLC35E4Q6ICL7 350 aa16.39■□□□□ 0.21
GTF3A-202ENST00000419181 ZNF596Q8TC21 504 aa16.39■□□□□ 0.21
GTF3A-202ENST00000419181 PHYHIPQ92561 330 aa16.39■□□□□ 0.21
GTF3A-202ENST00000419181 CCDC90BQ9GZT6 254 aa16.39■□□□□ 0.21
GTF3A-202ENST00000419181 TCF7L1Q9HCS4 588 aa16.39■□□□□ 0.21
GTF3A-202ENST00000419181 RCC2Q9P258 522 aaKnown RBP16.39■□□□□ 0.21
GTF3A-202ENST00000419181 TCF19Q9Y242 345 aa16.39■□□□□ 0.21
GTF3A-202ENST00000419181 HILPDAQ9Y5L2 63 aa16.39■□□□□ 0.21
GTF3A-202ENST00000419181 IL1AP01583 271 aa16.38■□□□□ 0.21
GTF3A-202ENST00000419181 HSMCR30P0CW71 290 aa16.38■□□□□ 0.21
GTF3A-202ENST00000419181 JUNBP17275 347 aaPredicted RBP16.38■□□□□ 0.21
GTF3A-202ENST00000419181 VHLP40337 213 aa16.38■□□□□ 0.21
GTF3A-202ENST00000419181 SRSF4Q08170 494 aaKnown RBP16.38■□□□□ 0.21
GTF3A-202ENST00000419181 MLLT11Q13015 90 aaPredicted RBP16.38■□□□□ 0.21
GTF3A-202ENST00000419181 UTF1Q5T230 341 aa16.38■□□□□ 0.21
GTF3A-202ENST00000419181 ATAD3CQ5T2N8 411 aa16.38■□□□□ 0.21
GTF3A-202ENST00000419181 CEACAM19Q7Z692 300 aa16.38■□□□□ 0.21
GTF3A-202ENST00000419181 LRRTM1Q86UE6 522 aa16.38■□□□□ 0.21
GTF3A-202ENST00000419181 TMEM104Q8NE00 496 aa16.38■□□□□ 0.21
GTF3A-202ENST00000419181 MRGPRDQ8TDS7 321 aa16.38■□□□□ 0.21
GTF3A-202ENST00000419181 CITED1Q99966 193 aa16.38■□□□□ 0.21
GTF3A-202ENST00000419181 ABCB10Q9NRK6 738 aa16.38■□□□□ 0.21
GTF3A-202ENST00000419181 TRRAPQ9Y4A5 3859 aa16.38■□□□□ 0.21
GTF3A-202ENST00000419181 NPIPB11E5RHQ5 1161 aa16.37■□□□□ 0.21
GTF3A-202ENST00000419181 UCHL1P09936 223 aa16.37■□□□□ 0.21
GTF3A-202ENST00000419181 MGMTP16455 207 aa16.37■□□□□ 0.21
GTF3A-202ENST00000419181 KRTAP10-3P60369 221 aa16.37■□□□□ 0.21
GTF3A-202ENST00000419181 HLA-DRB5Q30154 266 aa16.37■□□□□ 0.21
GTF3A-202ENST00000419181 HSD17B12Q53GQ0 312 aa16.37■□□□□ 0.21
GTF3A-202ENST00000419181 PRR31Q5SQ13 230 aa16.37■□□□□ 0.21
GTF3A-202ENST00000419181 BRICD5Q6PL45 260 aa16.37■□□□□ 0.21
GTF3A-202ENST00000419181 CCBE1Q6UXH8 406 aaPredicted RBP16.37■□□□□ 0.21
GTF3A-202ENST00000419181 TMEM203Q969S6 136 aa16.37■□□□□ 0.21
GTF3A-202ENST00000419181 BANF2Q9H503 90 aa16.37■□□□□ 0.21
GTF3A-202ENST00000419181 RANBP3Q9H6Z4 567 aaPredicted RBP16.37■□□□□ 0.21
GTF3A-202ENST00000419181 ZNF696Q9H7X3 374 aa16.37■□□□□ 0.21
GTF3A-202ENST00000419181 SPACA1Q9HBV2 294 aa16.37■□□□□ 0.21
GTF3A-202ENST00000419181 DPM3Q9P2X0 92 aa16.37■□□□□ 0.21
GTF3A-202ENST00000419181 GHRLQ9UBU3 117 aa16.37■□□□□ 0.21
GTF3A-202ENST00000419181 FBLN5Q9UBX5 448 aa16.37■□□□□ 0.21
GTF3A-202ENST00000419181 BLOC1S6Q9UL45 172 aa16.37■□□□□ 0.21
GTF3A-202ENST00000419181 TMEM30CPA0ZSE6 113 aa16.36■□□□□ 0.21
GTF3A-202ENST00000419181 A6NDX4 124 aa16.36■□□□□ 0.21
GTF3A-202ENST00000419181 FAM90A10PA6NDY2 464 aa16.36■□□□□ 0.21
GTF3A-202ENST00000419181 FAM90A18PA6NE21 464 aa16.36■□□□□ 0.21
GTF3A-202ENST00000419181 FAM90A16PA6NEW6 464 aa16.36■□□□□ 0.21
GTF3A-202ENST00000419181 FAM90A20PA6NIJ5 464 aa16.36■□□□□ 0.21
GTF3A-202ENST00000419181 FAM90A7PA6NKC0 464 aa16.36■□□□□ 0.21
GTF3A-202ENST00000419181 FAM90A22PA8MWA6 464 aa16.36■□□□□ 0.21
GTF3A-202ENST00000419181 FAM90A12PA8MX19 464 aa16.36■□□□□ 0.21
GTF3A-202ENST00000419181 FAM90A5PA8MXJ8 464 aa16.36■□□□□ 0.21
GTF3A-202ENST00000419181 FAM90A23PA8MXZ1 464 aa16.36■□□□□ 0.21
GTF3A-202ENST00000419181 FAM90A15PP0C7V4 464 aa16.36■□□□□ 0.21
GTF3A-202ENST00000419181 FAM90A13PP0C7W8 464 aa16.36■□□□□ 0.21
GTF3A-202ENST00000419181 FAM90A14PP0C7W9 464 aa16.36■□□□□ 0.21
GTF3A-202ENST00000419181 FAM90A24PP0C7X0 464 aa16.36■□□□□ 0.21
GTF3A-202ENST00000419181 CPEP16870 476 aa16.36■□□□□ 0.21
GTF3A-202ENST00000419181 SRMP19623 302 aa16.36■□□□□ 0.21
GTF3A-202ENST00000419181 NFYBP25208 207 aa16.36■□□□□ 0.21
GTF3A-202ENST00000419181 GABRA5P31644 462 aa16.36■□□□□ 0.21
GTF3A-202ENST00000419181 SSTR5P35346 364 aa16.36■□□□□ 0.21
GTF3A-202ENST00000419181 MAP2K4P45985 399 aa16.36■□□□□ 0.21
GTF3A-202ENST00000419181 RPS25P62851 125 aaKnown RBP16.36■□□□□ 0.21
GTF3A-202ENST00000419181 TBCEQ15813 527 aaPredicted RBP16.36■□□□□ 0.21
GTF3A-202ENST00000419181 OR4C13Q8NGP0 309 aa16.36■□□□□ 0.21
GTF3A-202ENST00000419181 Q96M66 194 aa16.36■□□□□ 0.21
GTF3A-202ENST00000419181 SELENOIQ9C0D9 397 aa16.36■□□□□ 0.21
GTF3A-202ENST00000419181 IDI2-AS1Q9NZ38 188 aa16.36■□□□□ 0.21
GTF3A-202ENST00000419181 PITPNC1Q9UKF7 332 aa16.36■□□□□ 0.21
GTF3A-202ENST00000419181 TRAV39A0A0B4J263 110 aa16.35■□□□□ 0.21
GTF3A-202ENST00000419181 F2RL2O00254 374 aa16.35■□□□□ 0.21
GTF3A-202ENST00000419181 TOR1AO14656 332 aa16.35■□□□□ 0.21
GTF3A-202ENST00000419181 CRTAPO75718 401 aaPredicted RBP16.35■□□□□ 0.21
GTF3A-202ENST00000419181 CD37P11049 281 aa16.35■□□□□ 0.21
GTF3A-202ENST00000419181 KIR2DS4P43632 304 aa16.35■□□□□ 0.21
GTF3A-202ENST00000419181 TRAM1Q15629 374 aa16.35■□□□□ 0.21
GTF3A-202ENST00000419181 C1orf100Q5SVJ3 147 aa16.35■□□□□ 0.21
GTF3A-202ENST00000419181 GLT8D1Q68CQ7 371 aa16.35■□□□□ 0.21
GTF3A-202ENST00000419181 ZNF497Q6ZNH5 498 aa16.35■□□□□ 0.21
GTF3A-202ENST00000419181 TMEM91Q6ZNR0 172 aa16.35■□□□□ 0.21
GTF3A-202ENST00000419181 OR10A7Q8NGE5 316 aa16.35■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 83.5 ms