RNA–Protein interactions for RNA: ENST00000406327.2

HMGB3P18-201, Transcript of high mobility group box 3 pseudogene 18, humanhuman

BASIC

Gene HMGB3P18, Length 590 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3P18-201ENST00000406327 OR51G1Q8NGK1 321 aa3.28□□□□□ -1.88
HMGB3P18-201ENST00000406327 NT5CQ8TCD5 201 aa3.28□□□□□ -1.88
HMGB3P18-201ENST00000406327 SFXN5Q8TD22 340 aa3.28□□□□□ -1.88
HMGB3P18-201ENST00000406327 PHF10Q8WUB8 498 aaKnown RBP3.28□□□□□ -1.88
HMGB3P18-201ENST00000406327 LCN9Q8WX39 176 aa3.28□□□□□ -1.88
HMGB3P18-201ENST00000406327 BORCS5Q969J3 196 aa3.28□□□□□ -1.88
HMGB3P18-201ENST00000406327 GALNT14Q96FL9 552 aa3.28□□□□□ -1.88
HMGB3P18-201ENST00000406327 SLC35G5Q96KT7 338 aa3.28□□□□□ -1.88
HMGB3P18-201ENST00000406327 ZNF681Q96N22 645 aa3.28□□□□□ -1.88
HMGB3P18-201ENST00000406327 COL21A1Q96P44 957 aa3.28□□□□□ -1.88
HMGB3P18-201ENST00000406327 WFDC6Q9BQY6 131 aa3.28□□□□□ -1.88
HMGB3P18-201ENST00000406327 COPS4Q9BT78 406 aa3.28□□□□□ -1.88
HMGB3P18-201ENST00000406327 CDCA4Q9BXL8 241 aa3.28□□□□□ -1.88
HMGB3P18-201ENST00000406327 PLSCR3Q9NRY6 295 aa3.28□□□□□ -1.88
HMGB3P18-201ENST00000406327 SCN8AQ9UQD0 1980 aa3.27□□□□□ -1.89
HMGB3P18-201ENST00000406327 OBSL1O75147 1896 aa3.27□□□□□ -1.89
HMGB3P18-201ENST00000406327 A0A1B0GUH1 482 aa3.27□□□□□ -1.89
HMGB3P18-201ENST00000406327 A0A1B0GW55 424 aa3.27□□□□□ -1.89
HMGB3P18-201ENST00000406327 A0A1W2PPV4 95 aa3.27□□□□□ -1.89
HMGB3P18-201ENST00000406327 CIB4A0PJX0 185 aa3.27□□□□□ -1.89
HMGB3P18-201ENST00000406327 EFCAB10A6NFE3 127 aa3.27□□□□□ -1.89
HMGB3P18-201ENST00000406327 CENPXA8MT69 81 aa3.27□□□□□ -1.89
HMGB3P18-201ENST00000406327 C10orf142B7Z368 130 aa3.27□□□□□ -1.89
HMGB3P18-201ENST00000406327 CLDN25C9JDP6 229 aa3.27□□□□□ -1.89
HMGB3P18-201ENST00000406327 ZW10O43264 779 aa3.27□□□□□ -1.89
HMGB3P18-201ENST00000406327 EPPINO95925 133 aa3.27□□□□□ -1.89
HMGB3P18-201ENST00000406327 HPRT1P00492 218 aa3.27□□□□□ -1.89
HMGB3P18-201ENST00000406327 HMGN2P05204 90 aaKnown RBP3.27□□□□□ -1.89
HMGB3P18-201ENST00000406327 DUX4L2P0CJ85 424 aa3.27□□□□□ -1.89
HMGB3P18-201ENST00000406327 DUX4L3P0CJ86 424 aa3.27□□□□□ -1.89
HMGB3P18-201ENST00000406327 DUX4L4P0CJ87 422 aa3.27□□□□□ -1.89
HMGB3P18-201ENST00000406327 DUX4L5P0CJ88 424 aa3.27□□□□□ -1.89
HMGB3P18-201ENST00000406327 DUX4L6P0CJ89 424 aa3.27□□□□□ -1.89
HMGB3P18-201ENST00000406327 DUX4L7P0CJ90 424 aa3.27□□□□□ -1.89
HMGB3P18-201ENST00000406327 STAG3L2P0CL84 134 aa3.27□□□□□ -1.89
HMGB3P18-201ENST00000406327 OR5H8P0DN80 308 aa3.27□□□□□ -1.89
HMGB3P18-201ENST00000406327 CD36P16671 472 aa3.27□□□□□ -1.89
HMGB3P18-201ENST00000406327 UGT2B10P36537 528 aa3.27□□□□□ -1.89
HMGB3P18-201ENST00000406327 ACTR1BP42025 376 aa3.27□□□□□ -1.89
HMGB3P18-201ENST00000406327 XKP51811 444 aa3.27□□□□□ -1.89
HMGB3P18-201ENST00000406327 RAB8AP61006 207 aa3.27□□□□□ -1.89
HMGB3P18-201ENST00000406327 VBP1P61758 197 aa3.27□□□□□ -1.89
HMGB3P18-201ENST00000406327 SNRPGP62308 76 aaKnown RBP3.27□□□□□ -1.89
HMGB3P18-201ENST00000406327 RELAQ04206 551 aa3.27□□□□□ -1.89
HMGB3P18-201ENST00000406327 FUT5Q11128 374 aa3.27□□□□□ -1.89
HMGB3P18-201ENST00000406327 ST3GAL4Q11206 333 aa3.27□□□□□ -1.89
HMGB3P18-201ENST00000406327 UNC119Q13432 240 aa3.27□□□□□ -1.89
HMGB3P18-201ENST00000406327 MPPED2Q15777 294 aa3.27□□□□□ -1.89
HMGB3P18-201ENST00000406327 TMEM183BQ1AE95 376 aa3.27□□□□□ -1.89
HMGB3P18-201ENST00000406327 TPRG1LQ5T0D9 272 aa3.27□□□□□ -1.89
HMGB3P18-201ENST00000406327 LCE1FQ5T754 118 aa3.27□□□□□ -1.89
HMGB3P18-201ENST00000406327 TMEM236Q5W0B7 351 aa3.27□□□□□ -1.89
HMGB3P18-201ENST00000406327 C12orf73Q69YU5 71 aa3.27□□□□□ -1.89
HMGB3P18-201ENST00000406327 DUX4L9Q6RFH8 374 aaPredicted RBP3.27□□□□□ -1.89
HMGB3P18-201ENST00000406327 Q6ZSR6 202 aa3.27□□□□□ -1.89
HMGB3P18-201ENST00000406327 MRPL21Q7Z2W9 205 aaKnown RBP3.27□□□□□ -1.89
HMGB3P18-201ENST00000406327 FAM122BQ7Z309 247 aa3.27□□□□□ -1.89
HMGB3P18-201ENST00000406327 VN1R4Q7Z5H5 301 aa3.27□□□□□ -1.89
HMGB3P18-201ENST00000406327 MRPL55Q7Z7F7 128 aaKnown RBP3.27□□□□□ -1.89
HMGB3P18-201ENST00000406327 COMTD1Q86VU5 262 aa3.27□□□□□ -1.89
HMGB3P18-201ENST00000406327 RBM45Q8IUH3 476 aaKnown RBP3.27□□□□□ -1.89
HMGB3P18-201ENST00000406327 TMEM183AQ8IXX5 376 aa3.27□□□□□ -1.89
HMGB3P18-201ENST00000406327 STX19Q8N4C7 294 aa3.27□□□□□ -1.89
HMGB3P18-201ENST00000406327 LINC00471Q8N535 108 aa3.27□□□□□ -1.89
HMGB3P18-201ENST00000406327 LRRC75AQ8NAA5 344 aa3.27□□□□□ -1.89
HMGB3P18-201ENST00000406327 OR5D16Q8NGK9 328 aa3.27□□□□□ -1.89
HMGB3P18-201ENST00000406327 OR10J6PQ8NGY7 276 aa3.27□□□□□ -1.89
HMGB3P18-201ENST00000406327 CCL4L1Q8NHW4 92 aa3.27□□□□□ -1.89
HMGB3P18-201ENST00000406327 NDNFQ8TB73 568 aa3.27□□□□□ -1.89
HMGB3P18-201ENST00000406327 DYNC2LI1Q8TCX1 351 aa3.27□□□□□ -1.89
HMGB3P18-201ENST00000406327 ZNF675Q8TD23 568 aa3.27□□□□□ -1.89
HMGB3P18-201ENST00000406327 CA5BP1Q8WTZ4 195 aa3.27□□□□□ -1.89
HMGB3P18-201ENST00000406327 S100ZQ8WXG8 99 aa3.27□□□□□ -1.89
HMGB3P18-201ENST00000406327 RDH5Q92781 318 aa3.27□□□□□ -1.89
HMGB3P18-201ENST00000406327 Q96MT0 163 aa3.27□□□□□ -1.89
HMGB3P18-201ENST00000406327 TRNT1Q96Q11 434 aaKnown RBP3.27□□□□□ -1.89
HMGB3P18-201ENST00000406327 OR2A5Q96R48 311 aa3.27□□□□□ -1.89
HMGB3P18-201ENST00000406327 ISYNA1Q9NPH2 558 aa3.27□□□□□ -1.89
HMGB3P18-201ENST00000406327 FBXO8Q9NRD0 319 aa3.27□□□□□ -1.89
HMGB3P18-201ENST00000406327 MCUBQ9NWR8 336 aa3.27□□□□□ -1.89
HMGB3P18-201ENST00000406327 MS4A12Q9NXJ0 267 aa3.27□□□□□ -1.89
HMGB3P18-201ENST00000406327 CALML5Q9NZT1 146 aa3.27□□□□□ -1.89
HMGB3P18-201ENST00000406327 DUX4Q9UBX2 424 aa3.27□□□□□ -1.89
HMGB3P18-201ENST00000406327 ST3GAL6Q9Y274 331 aa3.27□□□□□ -1.89
HMGB3P18-201ENST00000406327 RCL1Q9Y2P8 373 aaKnown RBP3.27□□□□□ -1.89
HMGB3P18-201ENST00000406327 YARS2Q9Y2Z4 477 aaKnown RBP3.27□□□□□ -1.89
HMGB3P18-201ENST00000406327 ZNF780BQ9Y6R6 833 aa3.27□□□□□ -1.89
HMGB3P18-201ENST00000406327 PLXNA2O75051 1894 aa3.26□□□□□ -1.89
HMGB3P18-201ENST00000406327 MUC22E2RYF6 1773 aaPredicted RBP3.26□□□□□ -1.89
HMGB3P18-201ENST00000406327 OR6C74A6NCV1 312 aa3.26□□□□□ -1.89
HMGB3P18-201ENST00000406327 EFCAB9A8MZ26 197 aa3.26□□□□□ -1.89
HMGB3P18-201ENST00000406327 C2orf74A8MZ97 194 aa3.26□□□□□ -1.89
HMGB3P18-201ENST00000406327 H0YGG7 62 aa3.26□□□□□ -1.89
HMGB3P18-201ENST00000406327 J3QRK9 145 aa3.26□□□□□ -1.89
HMGB3P18-201ENST00000406327 M0R129 80 aa3.26□□□□□ -1.89
HMGB3P18-201ENST00000406327 PFDN1O60925 122 aa3.26□□□□□ -1.89
HMGB3P18-201ENST00000406327 ENTPD6O75354 484 aa3.26□□□□□ -1.89
HMGB3P18-201ENST00000406327 SULT1C4O75897 302 aa3.26□□□□□ -1.89
HMGB3P18-201ENST00000406327 PTHP01270 115 aa3.26□□□□□ -1.89
HMGB3P18-201ENST00000406327 TNFP01375 233 aa3.26□□□□□ -1.89
Retrieved 100 of 20,778 RNA–protein pairs in 52.1 ms