RNA–Protein interactions for RNA: ENST00000395969.6

VPS41-203, Transcript of VPS41, HOPS complex subunit, humanhuman

TSL 5 BASIC

Gene VPS41, Length 3,181 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS41-203ENST00000395969 C2orf50Q96LR7 162 aa4.62□□□□□ -1.67
VPS41-203ENST00000395969 PACRGQ96M98 296 aaPredicted RBP4.62□□□□□ -1.67
VPS41-203ENST00000395969 TSSK2Q96PF2 358 aa4.62□□□□□ -1.67
VPS41-203ENST00000395969 SLC25A31Q9H0C2 315 aa4.62□□□□□ -1.67
VPS41-203ENST00000395969 NCOR1P1Q9H4R4 102 aa4.62□□□□□ -1.67
VPS41-203ENST00000395969 CKLFQ9UBR5 152 aa4.62□□□□□ -1.67
VPS41-203ENST00000395969 DHDHQ9UQ10 334 aa4.62□□□□□ -1.67
VPS41-203ENST00000395969 MRPS18BQ9Y676 258 aaKnown RBP4.62□□□□□ -1.67
VPS41-203ENST00000395969 HEATR1Q9H583 2144 aaKnown RBP4.62□□□□□ -1.67
VPS41-203ENST00000395969 A0A0G2JMM0 328 aa4.62□□□□□ -1.67
VPS41-203ENST00000395969 LOC107986453A0A1B0GWG9 222 aa4.62□□□□□ -1.67
VPS41-203ENST00000395969 A0A1W2PPB8 328 aa4.62□□□□□ -1.67
VPS41-203ENST00000395969 A0A1W2PRS3 328 aa4.62□□□□□ -1.67
VPS41-203ENST00000395969 C17orf51A8MQB3 221 aa4.62□□□□□ -1.67
VPS41-203ENST00000395969 KIR3DP1A8MWS1 328 aa4.62□□□□□ -1.67
VPS41-203ENST00000395969 SEC11BP0C7V7 166 aa4.62□□□□□ -1.67
VPS41-203ENST00000395969 GZMBP10144 247 aa4.62□□□□□ -1.67
VPS41-203ENST00000395969 FGF7P21781 194 aa4.62□□□□□ -1.67
VPS41-203ENST00000395969 ARR3P36575 388 aa4.62□□□□□ -1.67
VPS41-203ENST00000395969 CCR4P51679 360 aa4.62□□□□□ -1.67
VPS41-203ENST00000395969 CLN3Q13286 438 aa4.62□□□□□ -1.67
VPS41-203ENST00000395969 OR1C1Q15619 314 aa4.62□□□□□ -1.67
VPS41-203ENST00000395969 TMEM176BQ3YBM2 270 aaPredicted RBP4.62□□□□□ -1.67
VPS41-203ENST00000395969 RNFT1Q5M7Z0 435 aa4.62□□□□□ -1.67
VPS41-203ENST00000395969 AKR1C8PQ5T2L2 129 aa4.62□□□□□ -1.67
VPS41-203ENST00000395969 ABHD17BQ5VST6 288 aa4.62□□□□□ -1.67
VPS41-203ENST00000395969 C16orf47Q6ZP98 133 aaPredicted RBP4.62□□□□□ -1.67
VPS41-203ENST00000395969 FJX1Q86VR8 437 aa4.62□□□□□ -1.67
VPS41-203ENST00000395969 KDM8Q8N371 416 aa4.62□□□□□ -1.67
VPS41-203ENST00000395969 ZNF676Q8N7Q3 588 aa4.62□□□□□ -1.67
VPS41-203ENST00000395969 OR10D3Q8NH80 312 aa4.62□□□□□ -1.67
VPS41-203ENST00000395969 ABHD5Q8WTS1 349 aa4.62□□□□□ -1.67
VPS41-203ENST00000395969 OR10C1Q96KK4 312 aa4.62□□□□□ -1.67
VPS41-203ENST00000395969 HIST1H2BLQ99880 126 aa4.62□□□□□ -1.67
VPS41-203ENST00000395969 TMEM160Q9NX00 188 aa4.62□□□□□ -1.67
VPS41-203ENST00000395969 GPR132Q9UNW8 380 aa4.62□□□□□ -1.67
VPS41-203ENST00000395969 PUS1Q9Y606 427 aaKnown RBP eCLIP4.62□□□□□ -1.67
VPS41-203ENST00000395969 MED12Q93074 2177 aa4.62□□□□□ -1.67
VPS41-203ENST00000395969 hCG_38984A0A1B0GV85 526 aa4.61□□□□□ -1.67
VPS41-203ENST00000395969 MBD3L4A6NDZ8 208 aaPredicted RBP4.61□□□□□ -1.67
VPS41-203ENST00000395969 MBD3L3A6NE82 208 aaPredicted RBP4.61□□□□□ -1.67
VPS41-203ENST00000395969 MBD3L5A6NJ08 208 aaPredicted RBP4.61□□□□□ -1.67
VPS41-203ENST00000395969 ZNF727A8MUV8 499 aa4.61□□□□□ -1.67
VPS41-203ENST00000395969 AHRRA9YTQ3 701 aa4.61□□□□□ -1.67
VPS41-203ENST00000395969 RAMP1O60894 148 aa4.61□□□□□ -1.67
VPS41-203ENST00000395969 SCAF4O95104 1147 aaKnown RBP4.61□□□□□ -1.67
VPS41-203ENST00000395969 TNFSF15O95150 251 aa4.61□□□□□ -1.67
VPS41-203ENST00000395969 FSTL3O95633 263 aa4.61□□□□□ -1.67
VPS41-203ENST00000395969 CHATP28329 748 aa4.61□□□□□ -1.67
VPS41-203ENST00000395969 NTF4P34130 210 aa4.61□□□□□ -1.67
VPS41-203ENST00000395969 HRH1P35367 487 aa4.61□□□□□ -1.67
VPS41-203ENST00000395969 CD200P41217 278 aa4.61□□□□□ -1.67
VPS41-203ENST00000395969 RPL29P47914 159 aaKnown RBP4.61□□□□□ -1.67
VPS41-203ENST00000395969 ERVFRD-1P60508 538 aa4.61□□□□□ -1.67
VPS41-203ENST00000395969 SUPT4H1P63272 117 aaKnown RBP4.61□□□□□ -1.67
VPS41-203ENST00000395969 NKX6-1P78426 367 aaPredicted RBP4.61□□□□□ -1.67
VPS41-203ENST00000395969 HIKESHIQ53FT3 197 aa4.61□□□□□ -1.67
VPS41-203ENST00000395969 WIPI1Q5MNZ9 446 aaPredicted RBP4.61□□□□□ -1.67
VPS41-203ENST00000395969 NCR3LG1Q68D85 454 aa4.61□□□□□ -1.67
VPS41-203ENST00000395969 CLEC18BQ6UXF7 455 aa4.61□□□□□ -1.67
VPS41-203ENST00000395969 Q6ZS92 163 aa4.61□□□□□ -1.67
VPS41-203ENST00000395969 NUFIP2Q7Z417 695 aaKnown RBP4.61□□□□□ -1.67
VPS41-203ENST00000395969 PEG10Q86TG7 708 aaKnown RBP4.61□□□□□ -1.67
VPS41-203ENST00000395969 TMEM251Q8N6I4 163 aa4.61□□□□□ -1.67
VPS41-203ENST00000395969 HSD17B11Q8NBQ5 300 aa4.61□□□□□ -1.67
VPS41-203ENST00000395969 OR8B12Q8NGG6 310 aa4.61□□□□□ -1.67
VPS41-203ENST00000395969 MBD3L2Q8NHZ7 208 aaPredicted RBP4.61□□□□□ -1.67
VPS41-203ENST00000395969 SPTSSAQ969W0 71 aa4.61□□□□□ -1.67
VPS41-203ENST00000395969 OR2H1Q9GZK4 316 aa4.61□□□□□ -1.67
VPS41-203ENST00000395969 EIF5A2Q9GZV4 153 aaKnown RBP4.61□□□□□ -1.67
VPS41-203ENST00000395969 C5orf66Q9H5L9 145 aa4.61□□□□□ -1.67
VPS41-203ENST00000395969 KCNJ16Q9NPI9 418 aa4.61□□□□□ -1.67
VPS41-203ENST00000395969 TRAV34A0A0B4J273 112 aa4.61□□□□□ -1.67
VPS41-203ENST00000395969 GMFGO60234 142 aa4.61□□□□□ -1.67
VPS41-203ENST00000395969 GDF9O60383 454 aa4.61□□□□□ -1.67
VPS41-203ENST00000395969 CGAP01215 116 aa4.61□□□□□ -1.67
VPS41-203ENST00000395969 IGLV1-44P01699 117 aa4.61□□□□□ -1.67
VPS41-203ENST00000395969 TRGC2P03986 189 aa4.61□□□□□ -1.67
VPS41-203ENST00000395969 H2BFMP0C1H6 154 aa4.61□□□□□ -1.67
VPS41-203ENST00000395969 TRGC1P0CF51 173 aa4.61□□□□□ -1.67
VPS41-203ENST00000395969 OR13C7P0DN81 318 aa4.61□□□□□ -1.67
VPS41-203ENST00000395969 GLYATL3Q5SZD4 288 aa4.61□□□□□ -1.67
VPS41-203ENST00000395969 ZNF343Q6P1L6 599 aa4.61□□□□□ -1.67
VPS41-203ENST00000395969 TRAPPC6BQ86SZ2 158 aa4.61□□□□□ -1.67
VPS41-203ENST00000395969 ZNF101Q8IZC7 436 aa4.61□□□□□ -1.67
VPS41-203ENST00000395969 GVQW1Q8N7I0 195 aa4.61□□□□□ -1.67
VPS41-203ENST00000395969 OR1F12Q8NHA8 337 aa4.61□□□□□ -1.67
VPS41-203ENST00000395969 MARCH1Q8TCQ1 289 aa4.61□□□□□ -1.67
VPS41-203ENST00000395969 WFIKKN1Q96NZ8 548 aa4.61□□□□□ -1.67
VPS41-203ENST00000395969 SIGLEC12Q96PQ1 595 aa4.61□□□□□ -1.67
VPS41-203ENST00000395969 GINS3Q9BRX5 216 aa4.61□□□□□ -1.67
VPS41-203ENST00000395969 PBDC1Q9BVG4 233 aa4.61□□□□□ -1.67
VPS41-203ENST00000395969 SNHG12Q9BXW3 62 aa4.61□□□□□ -1.67
VPS41-203ENST00000395969 FBXL17Q9UF56 701 aa4.61□□□□□ -1.67
VPS41-203ENST00000395969 ZNF835Q9Y2P0 537 aa4.61□□□□□ -1.67
VPS41-203ENST00000395969 ASXL3Q9C0F0 2248 aa4.61□□□□□ -1.67
VPS41-203ENST00000395969 FAM171A2A8MVW0 826 aa4.61□□□□□ -1.67
VPS41-203ENST00000395969 NPIPB11E5RHQ5 1161 aa4.61□□□□□ -1.67
VPS41-203ENST00000395969 RFPL3SP0C7P2 107 aa4.61□□□□□ -1.67
VPS41-203ENST00000395969 LINC00614P0C842 121 aa4.61□□□□□ -1.67
Retrieved 100 of 20,778 RNA–protein pairs in 45.1 ms