RNA–Protein interactions for RNA: ENST00000377107.6

USP11-204, Transcript of ubiquitin specific peptidase 11, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene USP11, Length 3,515 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP11-204ENST00000377107 AKR1C8PQ5T2L2 129 aa11.1□□□□□ -0.63
USP11-204ENST00000377107 NUFIP2Q7Z417 695 aaKnown RBP11.1□□□□□ -0.63
USP11-204ENST00000377107 WDR5BQ86VZ2 330 aa11.1□□□□□ -0.63
USP11-204ENST00000377107 TRAPPC2LQ9UL33 140 aa11.1□□□□□ -0.63
USP11-204ENST00000377107 CARHSP1Q9Y2V2 147 aaKnown RBP11.1□□□□□ -0.63
USP11-204ENST00000377107 ASPMQ8IZT6 3477 aa11.1□□□□□ -0.63
USP11-204ENST00000377107 RRP8O43159 456 aaKnown RBP11.1□□□□□ -0.63
USP11-204ENST00000377107 RHBDL1O75783 438 aa11.1□□□□□ -0.63
USP11-204ENST00000377107 S100A9P06702 114 aaKnown RBP11.1□□□□□ -0.63
USP11-204ENST00000377107 S100GP29377 79 aa11.1□□□□□ -0.63
USP11-204ENST00000377107 CCL20P78556 96 aa11.1□□□□□ -0.63
USP11-204ENST00000377107 CLN3Q13286 438 aa11.1□□□□□ -0.63
USP11-204ENST00000377107 THNSL2Q86YJ6 484 aa11.1□□□□□ -0.63
USP11-204ENST00000377107 PBDC1Q9BVG4 233 aa11.1□□□□□ -0.63
USP11-204ENST00000377107 KPTNQ9Y664 436 aa11.1□□□□□ -0.63
USP11-204ENST00000377107 GTF3C1Q12789 2109 aa11.1□□□□□ -0.63
USP11-204ENST00000377107 IGSF23A1L1A6 192 aa11.1□□□□□ -0.63
USP11-204ENST00000377107 ZNF98A6NK75 572 aa11.1□□□□□ -0.63
USP11-204ENST00000377107 ZNF727A8MUV8 499 aa11.1□□□□□ -0.63
USP11-204ENST00000377107 RD3LP0DJH9 198 aa11.1□□□□□ -0.63
USP11-204ENST00000377107 RPS10P46783 165 aaKnown RBP11.1□□□□□ -0.63
USP11-204ENST00000377107 DHRS7BQ6IAN0 325 aaPredicted RBP11.1□□□□□ -0.63
USP11-204ENST00000377107 Q6ZPA2 131 aa11.1□□□□□ -0.63
USP11-204ENST00000377107 BEND4Q6ZU67 534 aa11.1□□□□□ -0.63
USP11-204ENST00000377107 UBALD2Q8IYN6 164 aa11.1□□□□□ -0.63
USP11-204ENST00000377107 TUBD1Q9UJT1 453 aa11.1□□□□□ -0.63
USP11-204ENST00000377107 HMGB3O15347 200 aaKnown RBP11.09□□□□□ -0.63
USP11-204ENST00000377107 P2RY1P47900 373 aa11.09□□□□□ -0.63
USP11-204ENST00000377107 SHEQ5VZ18 495 aa11.09□□□□□ -0.63
USP11-204ENST00000377107 LCN15Q6UWW0 184 aa11.09□□□□□ -0.63
USP11-204ENST00000377107 DEFB123Q8N688 67 aa11.09□□□□□ -0.63
USP11-204ENST00000377107 UBAC2Q8NBM4 344 aa11.09□□□□□ -0.63
USP11-204ENST00000377107 OR1K1Q8NGR3 316 aa11.09□□□□□ -0.63
USP11-204ENST00000377107 OR10J5Q8NHC4 309 aa11.09□□□□□ -0.63
USP11-204ENST00000377107 NANPQ8TBE9 248 aa11.09□□□□□ -0.63
USP11-204ENST00000377107 ZDHHC8Q9ULC8 765 aa11.09□□□□□ -0.63
USP11-204ENST00000377107 FZR1Q9UM11 496 aa11.09□□□□□ -0.63
USP11-204ENST00000377107 TMED3Q9Y3Q3 217 aa11.09□□□□□ -0.63
USP11-204ENST00000377107 LIPGQ9Y5X9 500 aa11.09□□□□□ -0.63
USP11-204ENST00000377107 ZFP92A6NM28 416 aa11.09□□□□□ -0.63
USP11-204ENST00000377107 NUDT19A8MXV4 375 aa11.09□□□□□ -0.63
USP11-204ENST00000377107 DEGS1O15121 323 aa11.09□□□□□ -0.63
USP11-204ENST00000377107 H2AFB1P0C5Y9 115 aa11.09□□□□□ -0.63
USP11-204ENST00000377107 TMEM251Q8N6I4 163 aa11.09□□□□□ -0.63
USP11-204ENST00000377107 FAM173AQ9BQD7 235 aa11.09□□□□□ -0.63
USP11-204ENST00000377107 TTTY12Q9BZ98 90 aa11.09□□□□□ -0.63
USP11-204ENST00000377107 CACFD1Q9UGQ2 172 aa11.09□□□□□ -0.63
USP11-204ENST00000377107 ZNF724A8MTY0 619 aa11.09□□□□□ -0.63
USP11-204ENST00000377107 RPL36A-HNRNPH2H7BZ11 118 aa11.09□□□□□ -0.63
USP11-204ENST00000377107 H7C1Q1 480 aa11.09□□□□□ -0.63
USP11-204ENST00000377107 YKT6O15498 198 aa11.09□□□□□ -0.63
USP11-204ENST00000377107 CYTIPO60759 359 aa11.09□□□□□ -0.63
USP11-204ENST00000377107 NQO2P16083 231 aa11.09□□□□□ -0.63
USP11-204ENST00000377107 SNCAP37840 140 aa11.09□□□□□ -0.63
USP11-204ENST00000377107 MPLP40238 635 aa11.09□□□□□ -0.63
USP11-204ENST00000377107 PMP22Q01453 160 aa11.09□□□□□ -0.63
USP11-204ENST00000377107 ZNF808Q8N4W9 903 aaPredicted RBP11.09□□□□□ -0.63
USP11-204ENST00000377107 CNEP1R1Q8N9A8 125 aa11.09□□□□□ -0.63
USP11-204ENST00000377107 HPSE2Q8WWQ2 592 aa11.09□□□□□ -0.63
USP11-204ENST00000377107 APOBEC3DQ96AK3 386 aaPredicted RBP11.09□□□□□ -0.63
USP11-204ENST00000377107 SPIN2AQ99865 258 aa11.09□□□□□ -0.63
USP11-204ENST00000377107 SPIN2BQ9BPZ2 258 aa11.09□□□□□ -0.63
USP11-204ENST00000377107 UFSP2Q9NUQ7 469 aa11.09□□□□□ -0.63
USP11-204ENST00000377107 LOC400499M0QZD8 3231 aa11.09□□□□□ -0.63
USP11-204ENST00000377107 IGHEP01854 428 aa11.08□□□□□ -0.64
USP11-204ENST00000377107 TFF1P04155 84 aa11.08□□□□□ -0.64
USP11-204ENST00000377107 LYL1P12980 280 aa11.08□□□□□ -0.64
USP11-204ENST00000377107 CEBPDP49716 269 aaPredicted RBP11.08□□□□□ -0.64
USP11-204ENST00000377107 ARG2P78540 354 aa11.08□□□□□ -0.64
USP11-204ENST00000377107 TMEM211Q6ICI0 200 aa11.08□□□□□ -0.64
USP11-204ENST00000377107 RBMS3Q6XE24 437 aaKnown RBP11.08□□□□□ -0.64
USP11-204ENST00000377107 FOXL2NBQ6ZUU3 175 aa11.08□□□□□ -0.64
USP11-204ENST00000377107 TMEM222Q9H0R3 208 aa11.08□□□□□ -0.64
USP11-204ENST00000377107 OR1A1Q9P1Q5 309 aa11.08□□□□□ -0.64
USP11-204ENST00000377107 SLC22A20A6NK97 555 aa11.08□□□□□ -0.64
USP11-204ENST00000377107 TRDCB7Z8K6 153 aa11.08□□□□□ -0.64
USP11-204ENST00000377107 PROB1E7EW31 1015 aa11.08□□□□□ -0.64
USP11-204ENST00000377107 PSG2P11465 335 aa11.08□□□□□ -0.64
USP11-204ENST00000377107 FGF8P55075 233 aaPredicted RBP11.08□□□□□ -0.64
USP11-204ENST00000377107 GPR157Q5UAW9 335 aa11.08□□□□□ -0.64
USP11-204ENST00000377107 C20orf204Q6ZNR8 217 aa11.08□□□□□ -0.64
USP11-204ENST00000377107 TMEM252Q8N6L7 170 aa11.08□□□□□ -0.64
USP11-204ENST00000377107 DMBX1Q8NFW5 382 aa11.08□□□□□ -0.64
USP11-204ENST00000377107 SH2D2AQ9NP31 389 aa11.08□□□□□ -0.64
USP11-204ENST00000377107 TECTAO75443 2155 aa11.08□□□□□ -0.64
USP11-204ENST00000377107 LYZL6O75951 148 aa11.08□□□□□ -0.64
USP11-204ENST00000377107 GAPDHP04406 335 aaKnown RBP11.08□□□□□ -0.64
USP11-204ENST00000377107 MMP7P09237 267 aaPredicted RBP11.08□□□□□ -0.64
USP11-204ENST00000377107 METTL15P1P0C7V9 234 aa11.08□□□□□ -0.64
USP11-204ENST00000377107 DANCRP0C864 163 aa11.08□□□□□ -0.64
USP11-204ENST00000377107 ELLP55199 621 aaPredicted RBP11.08□□□□□ -0.64
USP11-204ENST00000377107 ERVS71-1P61550 626 aa11.08□□□□□ -0.64
USP11-204ENST00000377107 IL13RA2Q14627 380 aa11.08□□□□□ -0.64
USP11-204ENST00000377107 EIF2S3LQ2VIR3 472 aaKnown RBP11.08□□□□□ -0.64
USP11-204ENST00000377107 OR8G2PQ6IF36 304 aa11.08□□□□□ -0.64
USP11-204ENST00000377107 GALNT14Q96FL9 552 aa11.08□□□□□ -0.64
USP11-204ENST00000377107 GNG13Q9P2W3 67 aa11.08□□□□□ -0.64
USP11-204ENST00000377107 POMT1Q9Y6A1 747 aa11.08□□□□□ -0.64
USP11-204ENST00000377107 PCNX2A6NKB5 2137 aa11.07□□□□□ -0.64
USP11-204ENST00000377107 NEURL1O76050 574 aa11.07□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 41.1 ms