RNA–Protein interactions for RNA: ENST00000309190.9

CAST-201, Transcript of calpastatin, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene CAST, Length 4,282 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAST-201ENST00000309190 GNG10P50151 68 aa4.21□□□□□ -1.74
CAST-201ENST00000309190 MRPS34P82930 218 aaKnown RBP4.21□□□□□ -1.74
CAST-201ENST00000309190 KISS1Q15726 138 aa4.21□□□□□ -1.74
CAST-201ENST00000309190 Q499Y3 187 aa4.21□□□□□ -1.74
CAST-201ENST00000309190 FAHD2BQ6P2I3 314 aaPredicted RBP4.21□□□□□ -1.74
CAST-201ENST00000309190 ZNF525Q8N782 197 aa4.21□□□□□ -1.74
CAST-201ENST00000309190 OR4A4PQ8NGN8 299 aa4.21□□□□□ -1.74
CAST-201ENST00000309190 RNF138Q8WVD3 245 aa4.21□□□□□ -1.74
CAST-201ENST00000309190 FAHD2AQ96GK7 314 aa4.21□□□□□ -1.74
CAST-201ENST00000309190 ZNF224Q9NZL3 707 aa4.21□□□□□ -1.74
CAST-201ENST00000309190 ZNF107Q9UII5 783 aaPredicted RBP4.21□□□□□ -1.74
CAST-201ENST00000309190 TNFSF18Q9UNG2 199 aa4.21□□□□□ -1.74
CAST-201ENST00000309190 IGHV2OR16-5A0A0B4J2B6 119 aa4.2□□□□□ -1.74
CAST-201ENST00000309190 LOC102725191A0A1B0GVB3 256 aa4.2□□□□□ -1.74
CAST-201ENST00000309190 PSMB1P20618 241 aaKnown RBP4.2□□□□□ -1.74
CAST-201ENST00000309190 NFYAP23511 347 aaPredicted RBP4.2□□□□□ -1.74
CAST-201ENST00000309190 PMELP40967 661 aa4.2□□□□□ -1.74
CAST-201ENST00000309190 TDGF1P3P51864 188 aa4.2□□□□□ -1.74
CAST-201ENST00000309190 KLF3P57682 345 aaPredicted RBP4.2□□□□□ -1.74
CAST-201ENST00000309190 PCBD1P61457 104 aa4.2□□□□□ -1.74
CAST-201ENST00000309190 TNFAIP6P98066 277 aaPredicted RBP4.2□□□□□ -1.74
CAST-201ENST00000309190 AESQ08117 197 aa4.2□□□□□ -1.74
CAST-201ENST00000309190 C2orf76Q3KRA6 126 aa4.2□□□□□ -1.74
CAST-201ENST00000309190 TMEM69Q5SWH9 247 aa4.2□□□□□ -1.74
CAST-201ENST00000309190 Q6ZSR3 168 aa4.2□□□□□ -1.74
CAST-201ENST00000309190 DND1Q8IYX4 353 aaKnown RBP4.2□□□□□ -1.74
CAST-201ENST00000309190 OR13C8Q8NGS7 320 aa4.2□□□□□ -1.74
CAST-201ENST00000309190 GPX8Q8TED1 209 aa4.2□□□□□ -1.74
CAST-201ENST00000309190 LRRC29Q8WV35 223 aa4.2□□□□□ -1.74
CAST-201ENST00000309190 BCL2L2Q92843 193 aaPredicted RBP4.2□□□□□ -1.74
CAST-201ENST00000309190 NABP1Q96AH0 204 aa4.2□□□□□ -1.74
CAST-201ENST00000309190 LYZL4Q96KX0 146 aa4.2□□□□□ -1.74
CAST-201ENST00000309190 C1orf147Q96MC9 270 aaPredicted RBP4.2□□□□□ -1.74
CAST-201ENST00000309190 SAP30LQ9HAJ7 183 aa4.2□□□□□ -1.74
CAST-201ENST00000309190 ZMAT5Q9UDW3 170 aaKnown RBP4.2□□□□□ -1.74
CAST-201ENST00000309190 ST3GAL6Q9Y274 331 aa4.2□□□□□ -1.74
CAST-201ENST00000309190 R4GMQ9 66 aa4.2□□□□□ -1.74
CAST-201ENST00000309190 V9GY05 133 aa4.2□□□□□ -1.74
CAST-201ENST00000309190 M0R233 179 aa4.2□□□□□ -1.74
CAST-201ENST00000309190 SLC25A17O43808 307 aa4.2□□□□□ -1.74
CAST-201ENST00000309190 TAS2R43P59537 309 aa4.2□□□□□ -1.74
CAST-201ENST00000309190 SSBP1Q04837 148 aaKnown RBP4.2□□□□□ -1.74
CAST-201ENST00000309190 GUCA2BQ16661 112 aa4.2□□□□□ -1.74
CAST-201ENST00000309190 RPL22L1Q6P5R6 122 aaKnown RBP4.2□□□□□ -1.74
CAST-201ENST00000309190 TRAT1Q6PIZ9 186 aa4.2□□□□□ -1.74
CAST-201ENST00000309190 PNLDC1Q8NA58 520 aaKnown RBP4.2□□□□□ -1.74
CAST-201ENST00000309190 MRPL48Q96GC5 212 aaKnown RBP4.2□□□□□ -1.74
CAST-201ENST00000309190 PCGF1Q9BSM1 259 aa4.2□□□□□ -1.74
CAST-201ENST00000309190 HIPK2Q9H2X6 1198 aa4.2□□□□□ -1.74
CAST-201ENST00000309190 GLS2Q9UI32 602 aa4.2□□□□□ -1.74
CAST-201ENST00000309190 HSPB2A8KAH6 182 aa4.2□□□□□ -1.74
CAST-201ENST00000309190 CEACAM4O75871 244 aa4.2□□□□□ -1.74
CAST-201ENST00000309190 ARL6IP5O75915 188 aa4.2□□□□□ -1.74
CAST-201ENST00000309190 IFNA7P01567 189 aa4.2□□□□□ -1.74
CAST-201ENST00000309190 RCC1P18754 421 aaPredicted RBP4.2□□□□□ -1.74
CAST-201ENST00000309190 FSTP19883 344 aa4.2□□□□□ -1.74
CAST-201ENST00000309190 BCL3P20749 454 aa4.2□□□□□ -1.74
CAST-201ENST00000309190 DCTDP32321 178 aa4.2□□□□□ -1.74
CAST-201ENST00000309190 SERPINF1P36955 418 aa4.2□□□□□ -1.74
CAST-201ENST00000309190 HOXA1P49639 335 aaPredicted RBP4.2□□□□□ -1.74
CAST-201ENST00000309190 LCN2P80188 198 aa4.2□□□□□ -1.74
CAST-201ENST00000309190 HSPB2Q16082 182 aa4.2□□□□□ -1.74
CAST-201ENST00000309190 CDNFQ49AH0 187 aa4.2□□□□□ -1.74
CAST-201ENST00000309190 TRIQKQ629K1 86 aa4.2□□□□□ -1.74
CAST-201ENST00000309190 IGFL3Q6UXB1 125 aa4.2□□□□□ -1.74
CAST-201ENST00000309190 SSX9Q7RTT3 188 aa4.2□□□□□ -1.74
CAST-201ENST00000309190 MUC20Q8N307 709 aaPredicted RBP4.2□□□□□ -1.74
CAST-201ENST00000309190 FAM216BQ8N7L0 139 aa4.2□□□□□ -1.74
CAST-201ENST00000309190 C11orf44Q8N8P7 122 aa4.2□□□□□ -1.74
CAST-201ENST00000309190 WDR31Q8NA23 367 aa4.2□□□□□ -1.74
CAST-201ENST00000309190 RNF133Q8WVZ7 376 aa4.2□□□□□ -1.74
CAST-201ENST00000309190 FAM3DQ96BQ1 224 aa4.2□□□□□ -1.74
CAST-201ENST00000309190 DPCDQ9BVM2 203 aaPredicted RBP4.2□□□□□ -1.74
CAST-201ENST00000309190 KCNS2Q9ULS6 477 aa4.2□□□□□ -1.74
CAST-201ENST00000309190 PRELID1Q9Y255 219 aa4.2□□□□□ -1.74
CAST-201ENST00000309190 CHD3Q12873 2000 aaKnown RBP4.2□□□□□ -1.74
CAST-201ENST00000309190 TRAPPC2LH3BP13 241 aa4.19□□□□□ -1.74
CAST-201ENST00000309190 J3QKU1 62 aa4.19□□□□□ -1.74
CAST-201ENST00000309190 XRCC3O43542 346 aa4.19□□□□□ -1.74
CAST-201ENST00000309190 IGHG3P01860 377 aa4.19□□□□□ -1.74
CAST-201ENST00000309190 IGHMP01871 453 aa4.19□□□□□ -1.74
CAST-201ENST00000309190 COX6B1P14854 86 aa4.19□□□□□ -1.74
CAST-201ENST00000309190 BDKRB2P30411 391 aa4.19□□□□□ -1.74
CAST-201ENST00000309190 SLC25A1P53007 311 aa4.19□□□□□ -1.74
CAST-201ENST00000309190 SLC35D3Q5M8T2 416 aa4.19□□□□□ -1.74
CAST-201ENST00000309190 TMEM244Q5VVB8 128 aa4.19□□□□□ -1.74
CAST-201ENST00000309190 C5orf46Q6UWT4 87 aa4.19□□□□□ -1.74
CAST-201ENST00000309190 TMUB2Q71RG4 321 aa4.19□□□□□ -1.74
CAST-201ENST00000309190 KCNRGQ8N5I3 272 aa4.19□□□□□ -1.74
CAST-201ENST00000309190 PCNPQ8WW12 178 aaKnown RBP4.19□□□□□ -1.74
CAST-201ENST00000309190 PHYHIPLQ96FC7 376 aa4.19□□□□□ -1.74
CAST-201ENST00000309190 SMR3AQ99954 134 aa4.19□□□□□ -1.74
CAST-201ENST00000309190 VKORC1Q9BQB6 163 aa4.19□□□□□ -1.74
CAST-201ENST00000309190 PRDM14Q9GZV8 571 aa4.19□□□□□ -1.74
CAST-201ENST00000309190 SLC25A32Q9H2D1 315 aa4.19□□□□□ -1.74
CAST-201ENST00000309190 TMEM138Q9NPI0 162 aa4.19□□□□□ -1.74
CAST-201ENST00000309190 SLC17A5Q9NRA2 495 aa4.19□□□□□ -1.74
CAST-201ENST00000309190 TAS2R8Q9NYW2 309 aa4.19□□□□□ -1.74
CAST-201ENST00000309190 ETV7Q9Y603 341 aa4.19□□□□□ -1.74
CAST-201ENST00000309190 HAX1O00165 279 aa4.19□□□□□ -1.74
Retrieved 100 of 20,778 RNA–protein pairs in 123.2 ms