RNA–Protein interactions for RNA: ENST00000603837.1

LINC01109-201, Transcript of long intergenic non-protein coding RNA 1109, humanhuman

BASIC

Gene LINC01109, Length 3,081 nt, Biotype lincRNA, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01109-201ENST00000603837 IMPA1P29218 277 aa4.1□□□□□ -1.75
LINC01109-201ENST00000603837 SLC6A8P48029 635 aa4.1□□□□□ -1.75
LINC01109-201ENST00000603837 HINT1P49773 126 aaPredicted RBP4.1□□□□□ -1.75
LINC01109-201ENST00000603837 POLR2LP62875 67 aaKnown RBP4.1□□□□□ -1.75
LINC01109-201ENST00000603837 RTP5Q14D33 572 aa4.1□□□□□ -1.75
LINC01109-201ENST00000603837 EBPQ15125 230 aaKnown RBP4.1□□□□□ -1.75
LINC01109-201ENST00000603837 PLPPR5Q32ZL2 321 aa4.1□□□□□ -1.75
LINC01109-201ENST00000603837 TIMM23BQ5SRD1 257 aa4.1□□□□□ -1.75
LINC01109-201ENST00000603837 PRSS54Q6PEW0 395 aa4.1□□□□□ -1.75
LINC01109-201ENST00000603837 SLC25A47Q6Q0C1 308 aa4.1□□□□□ -1.75
LINC01109-201ENST00000603837 ZNF761Q86XN6 746 aaPredicted RBP4.1□□□□□ -1.75
LINC01109-201ENST00000603837 TDHQ8IZJ6 230 aa4.1□□□□□ -1.75
LINC01109-201ENST00000603837 OR5W2Q8NH69 310 aa4.1□□□□□ -1.75
LINC01109-201ENST00000603837 C15orf40Q8WUR7 153 aa4.1□□□□□ -1.75
LINC01109-201ENST00000603837 TVP23CQ96ET8 276 aa4.1□□□□□ -1.75
LINC01109-201ENST00000603837 S100A16Q96FQ6 103 aaKnown RBP4.1□□□□□ -1.75
LINC01109-201ENST00000603837 TIMP4Q99727 224 aa4.1□□□□□ -1.75
LINC01109-201ENST00000603837 HDAC8Q9BY41 377 aa4.1□□□□□ -1.75
LINC01109-201ENST00000603837 NMNAT2Q9BZQ4 307 aa4.1□□□□□ -1.75
LINC01109-201ENST00000603837 PARP12Q9H0J9 701 aaKnown RBP4.1□□□□□ -1.75
LINC01109-201ENST00000603837 ELL3Q9HB65 397 aaPredicted RBP4.1□□□□□ -1.75
LINC01109-201ENST00000603837 ENY2Q9NPA8 101 aa4.1□□□□□ -1.75
LINC01109-201ENST00000603837 ASIC5Q9NY37 505 aa4.1□□□□□ -1.75
LINC01109-201ENST00000603837 B3GALT1Q9Y5Z6 326 aa4.1□□□□□ -1.75
LINC01109-201ENST00000603837 ARL5AQ9Y689 179 aa4.1□□□□□ -1.75
LINC01109-201ENST00000603837 SIRT4Q9Y6E7 314 aaPredicted RBP4.1□□□□□ -1.75
LINC01109-201ENST00000603837 NUP214P35658 2090 aaPredicted RBP4.1□□□□□ -1.75
LINC01109-201ENST00000603837 CASP8AP2Q9UKL3 1982 aa4.1□□□□□ -1.75
LINC01109-201ENST00000603837 TLCD2A6NGC4 264 aa4.1□□□□□ -1.75
LINC01109-201ENST00000603837 NDUFS4O43181 175 aa4.1□□□□□ -1.75
LINC01109-201ENST00000603837 LRATO95237 230 aa4.1□□□□□ -1.75
LINC01109-201ENST00000603837 EDN1P05305 212 aa4.1□□□□□ -1.75
LINC01109-201ENST00000603837 AZU1P20160 251 aa4.1□□□□□ -1.75
LINC01109-201ENST00000603837 ADORA2BP29275 332 aa4.1□□□□□ -1.75
LINC01109-201ENST00000603837 MTCP1P56278 107 aa4.1□□□□□ -1.75
LINC01109-201ENST00000603837 DUSP2Q05923 314 aa4.1□□□□□ -1.75
LINC01109-201ENST00000603837 SMAGPQ0VAQ4 97 aa4.1□□□□□ -1.75
LINC01109-201ENST00000603837 DHRS2Q13268 280 aa4.1□□□□□ -1.75
LINC01109-201ENST00000603837 NSDHLQ15738 373 aa4.1□□□□□ -1.75
LINC01109-201ENST00000603837 TCTN1Q2MV58 587 aa4.1□□□□□ -1.75
LINC01109-201ENST00000603837 TMEM52BQ4KMG9 183 aa4.1□□□□□ -1.75
LINC01109-201ENST00000603837 RPL7L1Q6DKI1 246 aaKnown RBP4.1□□□□□ -1.75
LINC01109-201ENST00000603837 RPL22L1Q6P5R6 122 aaKnown RBP4.1□□□□□ -1.75
LINC01109-201ENST00000603837 Q6ZN92 141 aa4.1□□□□□ -1.75
LINC01109-201ENST00000603837 COX15Q7KZN9 410 aa4.1□□□□□ -1.75
LINC01109-201ENST00000603837 OLIG3Q7RTU3 272 aa4.1□□□□□ -1.75
LINC01109-201ENST00000603837 TMEM25Q86YD3 366 aa4.1□□□□□ -1.75
LINC01109-201ENST00000603837 ZNF547Q8IVP9 402 aa4.1□□□□□ -1.75
LINC01109-201ENST00000603837 KLHDC8AQ8IYD2 350 aa4.1□□□□□ -1.75
LINC01109-201ENST00000603837 LINC00471Q8N535 108 aa4.1□□□□□ -1.75
LINC01109-201ENST00000603837 COX18Q8N8Q8 333 aa4.1□□□□□ -1.75
LINC01109-201ENST00000603837 ZNF709Q8N972 641 aa4.1□□□□□ -1.75
LINC01109-201ENST00000603837 GLYATL1Q969I3 302 aa4.1□□□□□ -1.75
LINC01109-201ENST00000603837 HPDLQ96IR7 371 aa4.1□□□□□ -1.75
LINC01109-201ENST00000603837 SLC35G5Q96KT7 338 aa4.1□□□□□ -1.75
LINC01109-201ENST00000603837 PRDM14Q9GZV8 571 aa4.1□□□□□ -1.75
LINC01109-201ENST00000603837 ISG20L2Q9H9L3 353 aaKnown RBP4.1□□□□□ -1.75
LINC01109-201ENST00000603837 IL23AQ9NPF7 189 aa4.1□□□□□ -1.75
LINC01109-201ENST00000603837 TMEM9BQ9NQ34 198 aa4.1□□□□□ -1.75
LINC01109-201ENST00000603837 SLC2A4RGQ9NR83 387 aa4.1□□□□□ -1.75
LINC01109-201ENST00000603837 ZNF586Q9NXT0 402 aa4.1□□□□□ -1.75
LINC01109-201ENST00000603837 UQCR10Q9UDW1 63 aa4.1□□□□□ -1.75
LINC01109-201ENST00000603837 TTC3P53804 2025 aa4.1□□□□□ -1.75
LINC01109-201ENST00000603837 FRMPD3Q5JV73 1810 aa4.09□□□□□ -1.75
LINC01109-201ENST00000603837 TRBV24-1A0A075B6N3 115 aa4.09□□□□□ -1.75
LINC01109-201ENST00000603837 TRBV6-7A0A0A0MS04 114 aa4.09□□□□□ -1.75
LINC01109-201ENST00000603837 TRAV1-2A0A0B4J238 106 aa4.09□□□□□ -1.75
LINC01109-201ENST00000603837 GAGE12BA1L429 117 aa4.09□□□□□ -1.75
LINC01109-201ENST00000603837 MSGN1A6NI15 193 aa4.09□□□□□ -1.75
LINC01109-201ENST00000603837 FTCDNL1E5RQL4 147 aa4.09□□□□□ -1.75
LINC01109-201ENST00000603837 H0YL77 283 aa4.09□□□□□ -1.75
LINC01109-201ENST00000603837 FAAHO00519 579 aa4.09□□□□□ -1.75
LINC01109-201ENST00000603837 TMPRSS11DO60235 418 aa4.09□□□□□ -1.75
LINC01109-201ENST00000603837 GCM2O75603 506 aaPredicted RBP4.09□□□□□ -1.75
LINC01109-201ENST00000603837 HLA-AP01891 365 aaKnown RBP4.09□□□□□ -1.75
LINC01109-201ENST00000603837 ZNF19P17023 458 aa4.09□□□□□ -1.75
LINC01109-201ENST00000603837 HOXD9P28356 352 aaPredicted RBP4.09□□□□□ -1.75
LINC01109-201ENST00000603837 OPRD1P41143 372 aa4.09□□□□□ -1.75
LINC01109-201ENST00000603837 TAS2R20P59543 309 aa4.09□□□□□ -1.75
LINC01109-201ENST00000603837 SLC35A1P78382 337 aa4.09□□□□□ -1.75
LINC01109-201ENST00000603837 CDK3Q00526 305 aa4.09□□□□□ -1.75
LINC01109-201ENST00000603837 BAXQ07812 192 aa4.09□□□□□ -1.75
LINC01109-201ENST00000603837 DMRTC1Q5HYR2 192 aa4.09□□□□□ -1.75
LINC01109-201ENST00000603837 C6orf226Q5I0X4 101 aa4.09□□□□□ -1.75
LINC01109-201ENST00000603837 WDR74Q6RFH5 385 aaPredicted RBP4.09□□□□□ -1.75
LINC01109-201ENST00000603837 ZNF66Q6ZN08 573 aa4.09□□□□□ -1.75
LINC01109-201ENST00000603837 SLC38A9Q8NBW4 561 aa4.09□□□□□ -1.75
LINC01109-201ENST00000603837 IL22RA2Q969J5 263 aa4.09□□□□□ -1.75
LINC01109-201ENST00000603837 SEH1LQ96EE3 360 aa4.09□□□□□ -1.75
LINC01109-201ENST00000603837 RAX2Q96IS3 184 aa4.09□□□□□ -1.75
LINC01109-201ENST00000603837 RSPO3Q9BXY4 272 aaPredicted RBP4.09□□□□□ -1.75
LINC01109-201ENST00000603837 LPAR5Q9H1C0 372 aa4.09□□□□□ -1.75
LINC01109-201ENST00000603837 POPDC3Q9HBV1 291 aa4.09□□□□□ -1.75
LINC01109-201ENST00000603837 TMEM38BQ9NVV0 291 aa4.09□□□□□ -1.75
LINC01109-201ENST00000603837 FUT9Q9Y231 359 aa4.09□□□□□ -1.75
LINC01109-201ENST00000603837 AK6Q9Y3D8 172 aaKnown RBP4.09□□□□□ -1.75
LINC01109-201ENST00000603837 XIRP2A4UGR9 3374 aa4.09□□□□□ -1.75
LINC01109-201ENST00000603837 SMIM35A0A1B0GVV1 85 aa4.09□□□□□ -1.75
LINC01109-201ENST00000603837 A0A1W2PPK0 400 aa4.09□□□□□ -1.75
LINC01109-201ENST00000603837 CDHR4A6H8M9 788 aa4.09□□□□□ -1.75
Retrieved 100 of 20,778 RNA–protein pairs in 10.5 ms