RNA–Protein interactions for RNA: ENST00000582821.5

GGA3-215, Transcript of golgi associated, gamma adaptin ear containing, ARF binding protein 3, humanhuman

TSL 2

Gene GGA3, Length 1,018 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GGA3-215ENST00000582821 NKX3-1Q99801 234 aaPredicted RBP11.34□□□□□ -0.59
GGA3-215ENST00000582821 BARHL1Q9BZE3 327 aa11.34□□□□□ -0.59
GGA3-215ENST00000582821 GAL3ST2Q9H3Q3 398 aa11.34□□□□□ -0.59
GGA3-215ENST00000582821 OR6C3Q9NZP0 311 aa11.34□□□□□ -0.59
GGA3-215ENST00000582821 VPREB3Q9UKI3 123 aa11.34□□□□□ -0.59
GGA3-215ENST00000582821 ST3GAL6Q9Y274 331 aa11.34□□□□□ -0.59
GGA3-215ENST00000582821 MEX3AA1L020 520 aaKnown RBP11.33□□□□□ -0.6
GGA3-215ENST00000582821 VGLL3A8MV65 326 aa11.33□□□□□ -0.6
GGA3-215ENST00000582821 CLPXO76031 633 aa11.33□□□□□ -0.6
GGA3-215ENST00000582821 MAS1P04201 325 aa11.33□□□□□ -0.6
GGA3-215ENST00000582821 GTF2F2P13984 249 aa11.33□□□□□ -0.6
GGA3-215ENST00000582821 GP2P55259 537 aaKnown RBP11.33□□□□□ -0.6
GGA3-215ENST00000582821 RBM11P57052 281 aaKnown RBP11.33□□□□□ -0.6
GGA3-215ENST00000582821 RELBQ01201 579 aa11.33□□□□□ -0.6
GGA3-215ENST00000582821 MPV17LQ2QL34 196 aa11.33□□□□□ -0.6
GGA3-215ENST00000582821 PAN3Q58A45 887 aaKnown RBP11.33□□□□□ -0.6
GGA3-215ENST00000582821 OR52W1Q6IF63 320 aa11.33□□□□□ -0.6
GGA3-215ENST00000582821 TRAPPC6BQ86SZ2 158 aa11.33□□□□□ -0.6
GGA3-215ENST00000582821 OR4F5Q8NH21 305 aa11.33□□□□□ -0.6
GGA3-215ENST00000582821 PHYHIPQ92561 330 aa11.33□□□□□ -0.6
GGA3-215ENST00000582821 MRPS24Q96EL2 167 aaKnown RBP11.33□□□□□ -0.6
GGA3-215ENST00000582821 CNBD2Q96M20 576 aa11.33□□□□□ -0.6
GGA3-215ENST00000582821 SSX3Q99909 188 aa11.33□□□□□ -0.6
GGA3-215ENST00000582821 UQCC2Q9BRT2 126 aa11.33□□□□□ -0.6
GGA3-215ENST00000582821 TMEM133Q9H2Q1 129 aa11.33□□□□□ -0.6
GGA3-215ENST00000582821 LINC00574Q9H8X3 128 aa11.33□□□□□ -0.6
GGA3-215ENST00000582821 MRPS28Q9Y2Q9 187 aaKnown RBP11.33□□□□□ -0.6
GGA3-215ENST00000582821 IGHV2-26A0A0B4J1V2 119 aa11.32□□□□□ -0.6
GGA3-215ENST00000582821 ZNF729A6NN14 1252 aaPredicted RBP11.32□□□□□ -0.6
GGA3-215ENST00000582821 HAX1O00165 279 aa11.32□□□□□ -0.6
GGA3-215ENST00000582821 MMP23AO75900 390 aa11.32□□□□□ -0.6
GGA3-215ENST00000582821 ARG1P05089 322 aa11.32□□□□□ -0.6
GGA3-215ENST00000582821 MLLT11Q13015 90 aaPredicted RBP11.32□□□□□ -0.6
GGA3-215ENST00000582821 LRRC75BQ2VPJ9 315 aa11.32□□□□□ -0.6
GGA3-215ENST00000582821 SLC22A6Q4U2R8 563 aa11.32□□□□□ -0.6
GGA3-215ENST00000582821 LDLRAD2Q5SZI1 272 aa11.32□□□□□ -0.6
GGA3-215ENST00000582821 MINOS1Q5TGZ0 78 aa11.32□□□□□ -0.6
GGA3-215ENST00000582821 RSBN1Q5VWQ0 802 aaPredicted RBP11.32□□□□□ -0.6
GGA3-215ENST00000582821 GLIPR1L1Q6UWM5 242 aa11.32□□□□□ -0.6
GGA3-215ENST00000582821 LHFPL4Q7Z7J7 247 aa11.32□□□□□ -0.6
GGA3-215ENST00000582821 RTN4RL2Q86UN3 420 aa11.32□□□□□ -0.6
GGA3-215ENST00000582821 JAGN1Q8N5M9 183 aa11.32□□□□□ -0.6
GGA3-215ENST00000582821 ZNF565Q8N9K5 539 aa11.32□□□□□ -0.6
GGA3-215ENST00000582821 SUMF2Q8NBJ7 301 aa11.32□□□□□ -0.6
GGA3-215ENST00000582821 TAF15Q92804 592 aaKnown RBP eCLIP11.32□□□□□ -0.6
GGA3-215ENST00000582821 UFD1Q92890 307 aa11.32□□□□□ -0.6
GGA3-215ENST00000582821 MUL1Q969V5 352 aa11.32□□□□□ -0.6
GGA3-215ENST00000582821 FOXRED1Q96CU9 486 aaPredicted RBP11.32□□□□□ -0.6
GGA3-215ENST00000582821 SLITRK2Q9H156 845 aa11.32□□□□□ -0.6
GGA3-215ENST00000582821 BEX1Q9HBH7 125 aa11.32□□□□□ -0.6
GGA3-215ENST00000582821 GHRLQ9UBU3 117 aa11.32□□□□□ -0.6
GGA3-215ENST00000582821 BLOC1S6Q9UL45 172 aa11.32□□□□□ -0.6
GGA3-215ENST00000582821 MINOS1-NBL1R4GNA1 71 aa11.32□□□□□ -0.6
GGA3-215ENST00000582821 A0A087X0M5 115 aa11.31□□□□□ -0.6
GGA3-215ENST00000582821 KBTBD11-OT1A0A1B0GTJ5 212 aa11.31□□□□□ -0.6
GGA3-215ENST00000582821 A0A1B0GX30 115 aa11.31□□□□□ -0.6
GGA3-215ENST00000582821 GEMIN2O14893 280 aaKnown RBP11.31□□□□□ -0.6
GGA3-215ENST00000582821 DENRO43583 198 aaKnown RBP11.31□□□□□ -0.6
GGA3-215ENST00000582821 MRPS14O60783 128 aaKnown RBP11.31□□□□□ -0.6
GGA3-215ENST00000582821 TSPAN9O75954 239 aa11.31□□□□□ -0.6
GGA3-215ENST00000582821 OR7C1O76099 320 aaPredicted RBP11.31□□□□□ -0.6
GGA3-215ENST00000582821 UCHL1P09936 223 aa11.31□□□□□ -0.6
GGA3-215ENST00000582821 CPEP16870 476 aa11.31□□□□□ -0.6
GGA3-215ENST00000582821 SRMP19623 302 aa11.31□□□□□ -0.6
GGA3-215ENST00000582821 SERPINA2P20848 420 aa11.31□□□□□ -0.6
GGA3-215ENST00000582821 MDKP21741 143 aaPredicted RBP11.31□□□□□ -0.6
GGA3-215ENST00000582821 OMGP23515 440 aa11.31□□□□□ -0.6
GGA3-215ENST00000582821 CDK2P24941 298 aa11.31□□□□□ -0.6
GGA3-215ENST00000582821 CD34P28906 385 aa11.31□□□□□ -0.6
GGA3-215ENST00000582821 RAG2P55895 527 aa11.31□□□□□ -0.6
GGA3-215ENST00000582821 INSL4Q14641 139 aa11.31□□□□□ -0.6
GGA3-215ENST00000582821 ATXN7L3Q14CW9 347 aaPredicted RBP11.31□□□□□ -0.6
GGA3-215ENST00000582821 TRAM1Q15629 374 aa11.31□□□□□ -0.6
GGA3-215ENST00000582821 C17orf58Q2M2W7 97 aa11.31□□□□□ -0.6
GGA3-215ENST00000582821 LIPKQ5VXJ0 399 aa11.31□□□□□ -0.6
GGA3-215ENST00000582821 SLC35E4Q6ICL7 350 aa11.31□□□□□ -0.6
GGA3-215ENST00000582821 SHISA2Q6UWI4 295 aa11.31□□□□□ -0.6
GGA3-215ENST00000582821 CEACAM19Q7Z692 300 aa11.31□□□□□ -0.6
GGA3-215ENST00000582821 LRRTM1Q86UE6 522 aa11.31□□□□□ -0.6
GGA3-215ENST00000582821 ABHD12Q8N2K0 398 aa11.31□□□□□ -0.6
GGA3-215ENST00000582821 OR4D6Q8NGJ1 314 aa11.31□□□□□ -0.6
GGA3-215ENST00000582821 PIFOQ8TCI5 191 aa11.31□□□□□ -0.6
GGA3-215ENST00000582821 TMED9Q9BVK6 235 aa11.31□□□□□ -0.6
GGA3-215ENST00000582821 DPCDQ9BVM2 203 aaPredicted RBP11.31□□□□□ -0.6
GGA3-215ENST00000582821 CLEC7AQ9BXN2 247 aa11.31□□□□□ -0.6
GGA3-215ENST00000582821 PPIL3Q9H2H8 161 aaKnown RBP11.31□□□□□ -0.6
GGA3-215ENST00000582821 C16orf95Q9H693 158 aa11.31□□□□□ -0.6
GGA3-215ENST00000582821 TCF7L1Q9HCS4 588 aa11.31□□□□□ -0.6
GGA3-215ENST00000582821 NBEAL1Q6ZS30 2694 aa11.3□□□□□ -0.6
GGA3-215ENST00000582821 MEIKINA0A087WXM9 373 aa11.3□□□□□ -0.6
GGA3-215ENST00000582821 A0A1W2PP11 408 aa11.3□□□□□ -0.6
GGA3-215ENST00000582821 CLPSL1A2RUU4 121 aa11.3□□□□□ -0.6
GGA3-215ENST00000582821 FAM90A10PA6NDY2 464 aa11.3□□□□□ -0.6
GGA3-215ENST00000582821 FAM90A18PA6NE21 464 aa11.3□□□□□ -0.6
GGA3-215ENST00000582821 FAM90A16PA6NEW6 464 aa11.3□□□□□ -0.6
GGA3-215ENST00000582821 FAM90A20PA6NIJ5 464 aa11.3□□□□□ -0.6
GGA3-215ENST00000582821 FAM90A7PA6NKC0 464 aa11.3□□□□□ -0.6
GGA3-215ENST00000582821 FAM90A22PA8MWA6 464 aa11.3□□□□□ -0.6
GGA3-215ENST00000582821 FAM90A12PA8MX19 464 aa11.3□□□□□ -0.6
GGA3-215ENST00000582821 FAM90A5PA8MXJ8 464 aa11.3□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 109.3 ms