RNA–Protein interactions for RNA: ENST00000539208.5

GNE-204, Transcript of glucosamine (UDP-N-acetyl)-2-epimerase/N-acetylmannosamine kinase, humanhuman

TSL 2 BASIC

Gene GNE, Length 2,190 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GNE-204ENST00000539208 VASH2Q86V25 355 aa15.29■□□□□ 0.04
GNE-204ENST00000539208 MRPL30Q8TCC3 161 aaKnown RBP15.29■□□□□ 0.04
GNE-204ENST00000539208 NEK7Q8TDX7 302 aa15.29■□□□□ 0.04
GNE-204ENST00000539208 PARD6AQ9NPB6 346 aa15.29■□□□□ 0.04
GNE-204ENST00000539208 TMEM218A2RU14 115 aa15.28■□□□□ 0.04
GNE-204ENST00000539208 CDS2O95674 445 aa15.28■□□□□ 0.04
GNE-204ENST00000539208 IGHV1-2P23083 117 aa15.28■□□□□ 0.04
GNE-204ENST00000539208 CCL11P51671 97 aa15.28■□□□□ 0.04
GNE-204ENST00000539208 GUSBP1Q15486 140 aa15.28■□□□□ 0.04
GNE-204ENST00000539208 ZNF565Q8N9K5 539 aa15.28■□□□□ 0.04
GNE-204ENST00000539208 UBAC2Q8NBM4 344 aa15.28■□□□□ 0.04
GNE-204ENST00000539208 FDCSPQ8NFU4 85 aa15.28■□□□□ 0.04
GNE-204ENST00000539208 OR4D5Q8NGN0 318 aa15.28■□□□□ 0.04
GNE-204ENST00000539208 RTL8AQ9BWD3 113 aa15.28■□□□□ 0.04
GNE-204ENST00000539208 SHANK1Q9Y566 2161 aa15.28■□□□□ 0.04
GNE-204ENST00000539208 TRAV24A0A0B4J272 114 aa15.28■□□□□ 0.04
GNE-204ENST00000539208 ST8SIA3O43173 380 aa15.28■□□□□ 0.04
GNE-204ENST00000539208 GPR137BO60478 399 aa15.28■□□□□ 0.04
GNE-204ENST00000539208 CNOT4O95628 575 aaKnown RBP15.28■□□□□ 0.04
GNE-204ENST00000539208 HOXB1P14653 301 aaPredicted RBP15.28■□□□□ 0.04
GNE-204ENST00000539208 P2RY1P47900 373 aa15.28■□□□□ 0.04
GNE-204ENST00000539208 SULT1A2P50226 295 aa15.28■□□□□ 0.04
GNE-204ENST00000539208 UBE2NP61088 152 aaKnown RBP15.28■□□□□ 0.04
GNE-204ENST00000539208 FAM214BQ7L5A3 538 aa15.28■□□□□ 0.04
GNE-204ENST00000539208 TBC1D26Q86UD7 250 aa15.28■□□□□ 0.04
GNE-204ENST00000539208 SLC35G3Q8N808 338 aa15.28■□□□□ 0.04
GNE-204ENST00000539208 ZNF488Q96MN9 340 aa15.28■□□□□ 0.04
GNE-204ENST00000539208 ARV1Q9H2C2 271 aa15.28■□□□□ 0.04
GNE-204ENST00000539208 OR51B6Q9H340 312 aa15.28■□□□□ 0.04
GNE-204ENST00000539208 IGKV1-6A0A0C4DH72 117 aa15.27■□□□□ 0.04
GNE-204ENST00000539208 SMPD2O60906 423 aa15.27■□□□□ 0.04
GNE-204ENST00000539208 GLI4P10075 376 aa15.27■□□□□ 0.04
GNE-204ENST00000539208 INO80CQ6PI98 192 aaPredicted RBP15.27■□□□□ 0.04
GNE-204ENST00000539208 Q6ZT83 130 aa15.27■□□□□ 0.04
GNE-204ENST00000539208 BOLLQ8N9W6 283 aaKnown RBP15.27■□□□□ 0.04
GNE-204ENST00000539208 OR52M1Q8NGK5 317 aa15.27■□□□□ 0.04
GNE-204ENST00000539208 OR4A4PQ8NGN8 299 aa15.27■□□□□ 0.04
GNE-204ENST00000539208 LRRC46Q96FV0 321 aa15.27■□□□□ 0.04
GNE-204ENST00000539208 BOD1Q96IK1 185 aa15.27■□□□□ 0.04
GNE-204ENST00000539208 SPAARA0A1B0GVQ0 90 aa15.26■□□□□ 0.03
GNE-204ENST00000539208 DUXBA0A1W2PPF3 345 aa15.26■□□□□ 0.03
GNE-204ENST00000539208 LRP5LA4QPB2 252 aa15.26■□□□□ 0.03
GNE-204ENST00000539208 PPP1CBP62140 327 aa15.26■□□□□ 0.03
GNE-204ENST00000539208 PJVKQ0ZLH3 352 aa15.26■□□□□ 0.03
GNE-204ENST00000539208 SPATA46Q5T0L3 261 aa15.26■□□□□ 0.03
GNE-204ENST00000539208 IGF2-ASQ6U949 168 aa15.26■□□□□ 0.03
GNE-204ENST00000539208 PCSK4Q6UW60 755 aa15.26■□□□□ 0.03
GNE-204ENST00000539208 ZNF818PQ6ZRF7 136 aa15.26■□□□□ 0.03
GNE-204ENST00000539208 Q8IYB0 196 aa15.26■□□□□ 0.03
GNE-204ENST00000539208 SECTM1Q8WVN6 248 aa15.26■□□□□ 0.03
GNE-204ENST00000539208 CDH20Q9HBT6 801 aa15.26■□□□□ 0.03
GNE-204ENST00000539208 DLL3Q9NYJ7 618 aa15.26■□□□□ 0.03
GNE-204ENST00000539208 TREM2Q9NZC2 230 aa15.26■□□□□ 0.03
GNE-204ENST00000539208 POMT1Q9Y6A1 747 aa15.26■□□□□ 0.03
GNE-204ENST00000539208 AQP7O14520 342 aa15.26■□□□□ 0.03
GNE-204ENST00000539208 HSPB6O14558 160 aa15.26■□□□□ 0.03
GNE-204ENST00000539208 RCC1P18754 421 aaPredicted RBP15.26■□□□□ 0.03
GNE-204ENST00000539208 BLOC1S1P78537 153 aa15.26■□□□□ 0.03
GNE-204ENST00000539208 ZNF273Q14593 569 aa15.26■□□□□ 0.03
GNE-204ENST00000539208 GABRA6Q16445 453 aa15.26■□□□□ 0.03
GNE-204ENST00000539208 ATRAIDQ6UW56 229 aa15.26■□□□□ 0.03
GNE-204ENST00000539208 MYPOPQ86VE0 399 aaPredicted RBP15.26■□□□□ 0.03
GNE-204ENST00000539208 GAPTQ8N292 157 aa15.26■□□□□ 0.03
GNE-204ENST00000539208 NARS2Q96I59 477 aaKnown RBP15.26■□□□□ 0.03
GNE-204ENST00000539208 USB1Q9BQ65 265 aaKnown RBP15.26■□□□□ 0.03
GNE-204ENST00000539208 UBE2J1Q9Y385 318 aaPredicted RBP15.26■□□□□ 0.03
GNE-204ENST00000539208 TRAV17A0A0B4J275 112 aa15.25■□□□□ 0.03
GNE-204ENST00000539208 IGKV1D-13A0A0B4J2D9 117 aa15.25■□□□□ 0.03
GNE-204ENST00000539208 HS3ST1O14792 307 aa15.25■□□□□ 0.03
GNE-204ENST00000539208 RHBDL1O75783 438 aa15.25■□□□□ 0.03
GNE-204ENST00000539208 CELA3BP08861 270 aa15.25■□□□□ 0.03
GNE-204ENST00000539208 IGKV1-13P0DP09 117 aa15.25■□□□□ 0.03
GNE-204ENST00000539208 RAC2P15153 192 aa15.25■□□□□ 0.03
GNE-204ENST00000539208 ERVK11-1P61568 191 aa15.25■□□□□ 0.03
GNE-204ENST00000539208 SPIN3Q5JUX0 258 aa15.25■□□□□ 0.03
GNE-204ENST00000539208 C10orf91Q5T1B1 145 aa15.25■□□□□ 0.03
GNE-204ENST00000539208 Q6P435 159 aa15.25■□□□□ 0.03
GNE-204ENST00000539208 MEX3BQ6ZN04 569 aaKnown RBP15.25■□□□□ 0.03
GNE-204ENST00000539208 C20orf204Q6ZNR8 217 aa15.25■□□□□ 0.03
GNE-204ENST00000539208 C5orf24Q7Z6I8 188 aa15.25■□□□□ 0.03
GNE-204ENST00000539208 TRIB1Q96RU8 372 aa15.25■□□□□ 0.03
GNE-204ENST00000539208 DEGS1O15121 323 aa15.25■□□□□ 0.03
GNE-204ENST00000539208 ATG12O94817 140 aa15.25■□□□□ 0.03
GNE-204ENST00000539208 MDH2P40926 338 aaKnown RBP15.25■□□□□ 0.03
GNE-204ENST00000539208 DEFA5Q01523 94 aa15.25■□□□□ 0.03
GNE-204ENST00000539208 SRSF6Q13247 344 aaKnown RBP15.25■□□□□ 0.03
GNE-204ENST00000539208 PXDC1Q5TGL8 231 aa15.25■□□□□ 0.03
GNE-204ENST00000539208 MED12LQ86YW9 2145 aa15.25■□□□□ 0.03
GNE-204ENST00000539208 ZNF695Q8IW36 515 aa15.25■□□□□ 0.03
GNE-204ENST00000539208 SELENOHQ8IZQ5 122 aaKnown RBP15.25■□□□□ 0.03
GNE-204ENST00000539208 C17orf78Q8N4C9 275 aa15.25■□□□□ 0.03
GNE-204ENST00000539208 DMBX1Q8NFW5 382 aa15.25■□□□□ 0.03
GNE-204ENST00000539208 RDH5Q92781 318 aa15.25■□□□□ 0.03
GNE-204ENST00000539208 ERGIC1Q969X5 290 aa15.25■□□□□ 0.03
GNE-204ENST00000539208 ABHD14BQ96IU4 210 aa15.25■□□□□ 0.03
GNE-204ENST00000539208 SPIN2AQ99865 258 aa15.25■□□□□ 0.03
GNE-204ENST00000539208 SPIN2BQ9BPZ2 258 aa15.25■□□□□ 0.03
GNE-204ENST00000539208 CABLES2Q9BTV7 478 aa15.25■□□□□ 0.03
GNE-204ENST00000539208 OR2J1Q9GZK6 312 aa15.25■□□□□ 0.03
GNE-204ENST00000539208 POLDIP2Q9Y2S7 368 aa15.25■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 66.1 ms