RNA–Protein interactions for RNA: ENST00000520857.5

TRAPPC9-208, Transcript of trafficking protein particle complex 9, humanhuman

TSL 1 (best)

Gene TRAPPC9, Length 3,693 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC9-208ENST00000520857 SNRPCP09234 159 aaKnown RBP11.12□□□□□ -0.63
TRAPPC9-208ENST00000520857 METTL15P1P0C7V9 234 aa11.12□□□□□ -0.63
TRAPPC9-208ENST00000520857 DTYMKP23919 212 aa11.12□□□□□ -0.63
TRAPPC9-208ENST00000520857 MSX1P28360 303 aa11.12□□□□□ -0.63
TRAPPC9-208ENST00000520857 OR8G1Q15617 311 aa11.12□□□□□ -0.63
TRAPPC9-208ENST00000520857 C9orf50Q5SZB4 431 aa11.12□□□□□ -0.63
TRAPPC9-208ENST00000520857 C9orf135Q5VTT2 229 aa11.12□□□□□ -0.63
TRAPPC9-208ENST00000520857 SPSB3Q6PJ21 355 aa11.12□□□□□ -0.63
TRAPPC9-208ENST00000520857 DMRTC2Q8IXT2 367 aaPredicted RBP11.12□□□□□ -0.63
TRAPPC9-208ENST00000520857 SPSB1Q96BD6 273 aa11.12□□□□□ -0.63
TRAPPC9-208ENST00000520857 MISP3Q96FF7 219 aa11.12□□□□□ -0.63
TRAPPC9-208ENST00000520857 ALKBH3Q96Q83 286 aaPredicted RBP11.12□□□□□ -0.63
TRAPPC9-208ENST00000520857 ATG101Q9BSB4 218 aa11.12□□□□□ -0.63
TRAPPC9-208ENST00000520857 KCNS2Q9ULS6 477 aa11.12□□□□□ -0.63
TRAPPC9-208ENST00000520857 MUC22E2RYF6 1773 aaPredicted RBP11.12□□□□□ -0.63
TRAPPC9-208ENST00000520857 NPIPB13A6NJU9 1138 aa11.12□□□□□ -0.63
TRAPPC9-208ENST00000520857 NPIPB4C9JG80 1138 aa11.12□□□□□ -0.63
TRAPPC9-208ENST00000520857 PDCD6O75340 191 aa11.12□□□□□ -0.63
TRAPPC9-208ENST00000520857 ZNF124Q15973 351 aa11.12□□□□□ -0.63
TRAPPC9-208ENST00000520857 SLC35E3Q7Z769 313 aa11.12□□□□□ -0.63
TRAPPC9-208ENST00000520857 MAML2Q8IZL2 1156 aaPredicted RBP11.12□□□□□ -0.63
TRAPPC9-208ENST00000520857 WFIKKN1Q96NZ8 548 aa11.12□□□□□ -0.63
TRAPPC9-208ENST00000520857 PNRC2Q9NPJ4 139 aaKnown RBP11.12□□□□□ -0.63
TRAPPC9-208ENST00000520857 GLRX2Q9NS18 164 aa11.12□□□□□ -0.63
TRAPPC9-208ENST00000520857 ZNF705FA8MVS1 300 aaPredicted RBP11.11□□□□□ -0.63
TRAPPC9-208ENST00000520857 TP53I11O14683 189 aa11.11□□□□□ -0.63
TRAPPC9-208ENST00000520857 DFFBO76075 338 aa11.11□□□□□ -0.63
TRAPPC9-208ENST00000520857 ZNF705DP0CH99 300 aaPredicted RBP11.11□□□□□ -0.63
TRAPPC9-208ENST00000520857 ZNF705BP0CI00 300 aaPredicted RBP11.11□□□□□ -0.63
TRAPPC9-208ENST00000520857 CCR5P51681 352 aa11.11□□□□□ -0.63
TRAPPC9-208ENST00000520857 NCR3LG1Q68D85 454 aa11.11□□□□□ -0.63
TRAPPC9-208ENST00000520857 OR8G2PQ6IF36 304 aa11.11□□□□□ -0.63
TRAPPC9-208ENST00000520857 EXTL1Q92935 676 aa11.11□□□□□ -0.63
TRAPPC9-208ENST00000520857 LHX4Q969G2 390 aa11.11□□□□□ -0.63
TRAPPC9-208ENST00000520857 C18orf12Q96KH6 178 aa11.11□□□□□ -0.63
TRAPPC9-208ENST00000520857 SLC39A9Q9NUM3 307 aa11.11□□□□□ -0.63
TRAPPC9-208ENST00000520857 DOCK7Q96N67 2140 aa11.11□□□□□ -0.63
TRAPPC9-208ENST00000520857 CHD9Q3L8U1 2897 aa11.11□□□□□ -0.63
TRAPPC9-208ENST00000520857 A0A1W2PNV4 684 aa11.11□□□□□ -0.63
TRAPPC9-208ENST00000520857 ARGFXA6NJG6 315 aa11.11□□□□□ -0.63
TRAPPC9-208ENST00000520857 CASP6P55212 293 aa11.11□□□□□ -0.63
TRAPPC9-208ENST00000520857 LSM6P62312 80 aaKnown RBP11.11□□□□□ -0.63
TRAPPC9-208ENST00000520857 COL19A1Q14993 1142 aa11.11□□□□□ -0.63
TRAPPC9-208ENST00000520857 OR10A7Q8NGE5 316 aa11.11□□□□□ -0.63
TRAPPC9-208ENST00000520857 UBALD1Q8TB05 177 aa11.11□□□□□ -0.63
TRAPPC9-208ENST00000520857 ABHD5Q8WTS1 349 aa11.11□□□□□ -0.63
TRAPPC9-208ENST00000520857 MOB3AQ96BX8 217 aa11.11□□□□□ -0.63
TRAPPC9-208ENST00000520857 HIST1H2BLQ99880 126 aa11.11□□□□□ -0.63
TRAPPC9-208ENST00000520857 CCL28Q9NRJ3 127 aa11.11□□□□□ -0.63
TRAPPC9-208ENST00000520857 PITPNC1Q9UKF7 332 aa11.11□□□□□ -0.63
TRAPPC9-208ENST00000520857 CD300LBA8K4G0 201 aa11.11□□□□□ -0.63
TRAPPC9-208ENST00000520857 BATFQ16520 125 aa11.11□□□□□ -0.63
TRAPPC9-208ENST00000520857 ANKRD37Q7Z713 158 aa11.11□□□□□ -0.63
TRAPPC9-208ENST00000520857 POC1BQ8TC44 478 aa11.11□□□□□ -0.63
TRAPPC9-208ENST00000520857 ZNF837Q96EG3 531 aaPredicted RBP11.11□□□□□ -0.63
TRAPPC9-208ENST00000520857 TMEM222Q9H0R3 208 aa11.11□□□□□ -0.63
TRAPPC9-208ENST00000520857 LYRM2Q9NU23 88 aaPredicted RBP11.11□□□□□ -0.63
TRAPPC9-208ENST00000520857 IGHV1OR21-1A0A087WYE8 117 aa11.1□□□□□ -0.63
TRAPPC9-208ENST00000520857 A0A0U1RQK1 487 aa11.1□□□□□ -0.63
TRAPPC9-208ENST00000520857 A0A0U1RQV5 110 aa11.1□□□□□ -0.63
TRAPPC9-208ENST00000520857 PROB1E7EW31 1015 aa11.1□□□□□ -0.63
TRAPPC9-208ENST00000520857 SOX15O60248 233 aa11.1□□□□□ -0.63
TRAPPC9-208ENST00000520857 CCL1P22362 96 aa11.1□□□□□ -0.63
TRAPPC9-208ENST00000520857 TAS2R60P59551 318 aa11.1□□□□□ -0.63
TRAPPC9-208ENST00000520857 PMS2P11Q13670 270 aa11.1□□□□□ -0.63
TRAPPC9-208ENST00000520857 ZNF506Q5JVG8 444 aa11.1□□□□□ -0.63
TRAPPC9-208ENST00000520857 SPANXN5Q5MJ07 72 aa11.1□□□□□ -0.63
TRAPPC9-208ENST00000520857 OR6C1Q96RD1 312 aa11.1□□□□□ -0.63
TRAPPC9-208ENST00000520857 KIAA2026Q5HYC2 2103 aa11.1□□□□□ -0.63
TRAPPC9-208ENST00000520857 FOSL2P15408 326 aa11.1□□□□□ -0.63
TRAPPC9-208ENST00000520857 CLDND2Q8NHS1 167 aa11.1□□□□□ -0.63
TRAPPC9-208ENST00000520857 ATP5SQ99766 215 aa11.1□□□□□ -0.63
TRAPPC9-208ENST00000520857 IER2Q9BTL4 223 aa11.1□□□□□ -0.63
TRAPPC9-208ENST00000520857 MYOTQ9UBF9 498 aa11.1□□□□□ -0.63
TRAPPC9-208ENST00000520857 PISDQ9UG56 409 aa11.1□□□□□ -0.63
TRAPPC9-208ENST00000520857 A0A087WWC5 75 aa11.1□□□□□ -0.63
TRAPPC9-208ENST00000520857 MLF1P58340 268 aa11.1□□□□□ -0.63
TRAPPC9-208ENST00000520857 PHYHD1Q5SRE7 291 aa11.1□□□□□ -0.63
TRAPPC9-208ENST00000520857 LHFPL2Q6ZUX7 228 aa11.1□□□□□ -0.63
TRAPPC9-208ENST00000520857 SLC16A14Q7RTX9 510 aa11.1□□□□□ -0.63
TRAPPC9-208ENST00000520857 ZNF441Q8N8Z8 693 aa11.1□□□□□ -0.63
TRAPPC9-208ENST00000520857 CALHM2Q9HA72 323 aa11.1□□□□□ -0.63
TRAPPC9-208ENST00000520857 RPRMQ9NS64 109 aa11.1□□□□□ -0.63
TRAPPC9-208ENST00000520857 AQP7P3A6NL99 342 aa11.09□□□□□ -0.63
TRAPPC9-208ENST00000520857 SELLP14151 372 aa11.09□□□□□ -0.63
TRAPPC9-208ENST00000520857 TCEAL6Q6IPX3 200 aa11.09□□□□□ -0.63
TRAPPC9-208ENST00000520857 BEND4Q6ZU67 534 aa11.09□□□□□ -0.63
TRAPPC9-208ENST00000520857 DTX1Q86Y01 620 aa11.09□□□□□ -0.63
TRAPPC9-208ENST00000520857 ZNF611Q8N823 705 aa11.09□□□□□ -0.63
TRAPPC9-208ENST00000520857 OR4D5Q8NGN0 318 aa11.09□□□□□ -0.63
TRAPPC9-208ENST00000520857 ANGPTL4Q9BY76 406 aa11.09□□□□□ -0.63
TRAPPC9-208ENST00000520857 TWSG1Q9GZX9 223 aa11.09□□□□□ -0.63
TRAPPC9-208ENST00000520857 SCRG1O75711 98 aa11.09□□□□□ -0.63
TRAPPC9-208ENST00000520857 CYB5R3P00387 301 aaPredicted RBP11.09□□□□□ -0.63
TRAPPC9-208ENST00000520857 OPN1MWP04001 364 aa11.09□□□□□ -0.63
TRAPPC9-208ENST00000520857 SCTP09683 121 aa11.09□□□□□ -0.63
TRAPPC9-208ENST00000520857 OPN1MW2P0DN77 364 aa11.09□□□□□ -0.63
TRAPPC9-208ENST00000520857 OPN1MW3P0DN78 364 aa11.09□□□□□ -0.63
TRAPPC9-208ENST00000520857 BCL2P10415 239 aa11.09□□□□□ -0.63
TRAPPC9-208ENST00000520857 VDAC1P21796 283 aa11.09□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 79.1 ms