RNA–Protein interactions for RNA: ENST00000516543.1

SNORA40.14-201, Transcript of small nucleolar RNA, H/ACA box 40, humanhuman

BASIC

Gene SNORA40, Length 86 nt, Biotype snoRNA, Subcellular localisation Cytoplasm .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNORA40.14-201ENST00000516543 FLVCR2Q9UPI3 526 aa-0.35□□□□□ -2.47
SNORA40.14-201ENST00000516543 POLR3AO14802 1390 aaPredicted RBP-0.35□□□□□ -2.47
SNORA40.14-201ENST00000516543 ATRNO75882 1429 aa-0.36□□□□□ -2.47
SNORA40.14-201ENST00000516543 SYNE2Q8WXH0 6885 aaKnown RBP-0.36□□□□□ -2.47
SNORA40.14-201ENST00000516543 LOC100653049A0A140TA62 436 aa-0.36□□□□□ -2.47
SNORA40.14-201ENST00000516543 CD300LBA8K4G0 201 aa-0.36□□□□□ -2.47
SNORA40.14-201ENST00000516543 DFFAO00273 331 aa-0.36□□□□□ -2.47
SNORA40.14-201ENST00000516543 PLA2G10O15496 165 aa-0.36□□□□□ -2.47
SNORA40.14-201ENST00000516543 KRT34O76011 436 aa-0.36□□□□□ -2.47
SNORA40.14-201ENST00000516543 GCGP01275 180 aa-0.36□□□□□ -2.47
SNORA40.14-201ENST00000516543 CCR7P32248 378 aa-0.36□□□□□ -2.47
SNORA40.14-201ENST00000516543 GPR1P46091 355 aa-0.36□□□□□ -2.47
SNORA40.14-201ENST00000516543 RPL14P50914 215 aaKnown RBP-0.36□□□□□ -2.47
SNORA40.14-201ENST00000516543 SURF2Q15527 256 aaPredicted RBP-0.36□□□□□ -2.47
SNORA40.14-201ENST00000516543 MMDQ15546 238 aa-0.36□□□□□ -2.47
SNORA40.14-201ENST00000516543 MAJINQ3KP22 176 aa-0.36□□□□□ -2.47
SNORA40.14-201ENST00000516543 CEACAM21Q3KPI0 293 aa-0.36□□□□□ -2.47
SNORA40.14-201ENST00000516543 CLEC12AQ5QGZ9 265 aa-0.36□□□□□ -2.47
SNORA40.14-201ENST00000516543 SPATA8Q6RVD6 105 aa-0.36□□□□□ -2.47
SNORA40.14-201ENST00000516543 FAM122BQ7Z309 247 aa-0.36□□□□□ -2.47
SNORA40.14-201ENST00000516543 OR4C5Q8NGB2 326 aa-0.36□□□□□ -2.47
SNORA40.14-201ENST00000516543 C16orf78Q8WTQ4 265 aa-0.36□□□□□ -2.47
SNORA40.14-201ENST00000516543 CA5BP1Q8WTZ4 195 aa-0.36□□□□□ -2.47
SNORA40.14-201ENST00000516543 RASD2Q96D21 266 aa-0.36□□□□□ -2.47
SNORA40.14-201ENST00000516543 FMC1Q96HJ9 113 aa-0.36□□□□□ -2.47
SNORA40.14-201ENST00000516543 OLFM3Q96PB7 478 aa-0.36□□□□□ -2.47
SNORA40.14-201ENST00000516543 ZNF471Q9BX82 626 aaPredicted RBP-0.36□□□□□ -2.47
SNORA40.14-201ENST00000516543 SHCBP1LQ9BZQ2 653 aa-0.36□□□□□ -2.47
SNORA40.14-201ENST00000516543 DEFB129Q9H1M3 183 aa-0.36□□□□□ -2.47
SNORA40.14-201ENST00000516543 POMKQ9H5K3 350 aa-0.36□□□□□ -2.47
SNORA40.14-201ENST00000516543 TMEM185BQ9H7F4 350 aa-0.36□□□□□ -2.47
SNORA40.14-201ENST00000516543 TXNL4BQ9NX01 149 aaKnown RBP-0.36□□□□□ -2.47
SNORA40.14-201ENST00000516543 ADA2Q9NZK5 511 aa-0.36□□□□□ -2.47
SNORA40.14-201ENST00000516543 PTPRBP23467 1997 aa-0.36□□□□□ -2.47
SNORA40.14-201ENST00000516543 INSRP06213 1382 aa-0.36□□□□□ -2.47
SNORA40.14-201ENST00000516543 ADAMTSL3P82987 1691 aa-0.37□□□□□ -2.47
SNORA40.14-201ENST00000516543 WDR19Q8NEZ3 1342 aa-0.37□□□□□ -2.47
SNORA40.14-201ENST00000516543 IGKV1-12A0A0C4DH73 117 aa-0.37□□□□□ -2.47
SNORA40.14-201ENST00000516543 GOLGA8OA6NCC3 632 aa-0.37□□□□□ -2.47
SNORA40.14-201ENST00000516543 GOLGA8NF8WBI6 632 aa-0.37□□□□□ -2.47
SNORA40.14-201ENST00000516543 H0Y8G0 127 aa-0.37□□□□□ -2.47
SNORA40.14-201ENST00000516543 H3BN98 237 aa-0.37□□□□□ -2.47
SNORA40.14-201ENST00000516543 IGKV1D-12P01611 117 aa-0.37□□□□□ -2.47
SNORA40.14-201ENST00000516543 UBCP0CG48 685 aaKnown RBP-0.37□□□□□ -2.47
SNORA40.14-201ENST00000516543 CD9P21926 228 aa-0.37□□□□□ -2.47
SNORA40.14-201ENST00000516543 SULT1E1P49888 294 aa-0.37□□□□□ -2.47
SNORA40.14-201ENST00000516543 C21orf59P57076 290 aa-0.37□□□□□ -2.47
SNORA40.14-201ENST00000516543 SLC38A11Q08AI6 406 aa-0.37□□□□□ -2.47
SNORA40.14-201ENST00000516543 CDK5R1Q15078 307 aa-0.37□□□□□ -2.47
SNORA40.14-201ENST00000516543 LRRC28Q86X40 367 aaPredicted RBP-0.37□□□□□ -2.47
SNORA40.14-201ENST00000516543 SLC35F6Q8N357 371 aa-0.37□□□□□ -2.47
SNORA40.14-201ENST00000516543 PQLC3Q8N755 202 aa-0.37□□□□□ -2.47
SNORA40.14-201ENST00000516543 C8orf31Q8N9H6 132 aa-0.37□□□□□ -2.47
SNORA40.14-201ENST00000516543 NDNFQ8TB73 568 aa-0.37□□□□□ -2.47
SNORA40.14-201ENST00000516543 NT5CQ8TCD5 201 aa-0.37□□□□□ -2.47
SNORA40.14-201ENST00000516543 ZFAND1Q8TCF1 268 aa-0.37□□□□□ -2.47
SNORA40.14-201ENST00000516543 CCL17Q92583 94 aa-0.37□□□□□ -2.47
SNORA40.14-201ENST00000516543 GLT1D1Q96MS3 346 aa-0.37□□□□□ -2.47
SNORA40.14-201ENST00000516543 ZNF426Q9BUY5 554 aa-0.37□□□□□ -2.47
SNORA40.14-201ENST00000516543 ALX4Q9H161 411 aaPredicted RBP-0.37□□□□□ -2.47
SNORA40.14-201ENST00000516543 GEMIN7Q9H840 131 aaKnown RBP-0.37□□□□□ -2.47
SNORA40.14-201ENST00000516543 SDHAF3Q9NRP4 125 aa-0.37□□□□□ -2.47
SNORA40.14-201ENST00000516543 STK38LQ9Y2H1 464 aa-0.37□□□□□ -2.47
SNORA40.14-201ENST00000516543 TNRC6BQ9UPQ9 1833 aaKnown RBP-0.37□□□□□ -2.47
SNORA40.14-201ENST00000516543 IGHV3-15A0A0B4J1V0 119 aa-0.38□□□□□ -2.47
SNORA40.14-201ENST00000516543 FAM240AA0A1B0GVK7 77 aa-0.38□□□□□ -2.47
SNORA40.14-201ENST00000516543 RNASEK-C17orf49H0YIS7 233 aa-0.38□□□□□ -2.47
SNORA40.14-201ENST00000516543 SIVA1O15304 175 aa-0.38□□□□□ -2.47
SNORA40.14-201ENST00000516543 MRPS14O60783 128 aaKnown RBP-0.38□□□□□ -2.47
SNORA40.14-201ENST00000516543 KRTAP2-3P0C7H8 128 aa-0.38□□□□□ -2.47
SNORA40.14-201ENST00000516543 RALBP11234 206 aa-0.38□□□□□ -2.47
SNORA40.14-201ENST00000516543 LPAR6P43657 344 aa-0.38□□□□□ -2.47
SNORA40.14-201ENST00000516543 HCCSP53701 268 aa-0.38□□□□□ -2.47
SNORA40.14-201ENST00000516543 ATP5IP56385 69 aaPredicted RBP-0.38□□□□□ -2.47
SNORA40.14-201ENST00000516543 PSG3Q16557 428 aa-0.38□□□□□ -2.47
SNORA40.14-201ENST00000516543 TPGS1Q6ZTW0 290 aa-0.38□□□□□ -2.47
SNORA40.14-201ENST00000516543 CCDC121Q6ZUS5 278 aa-0.38□□□□□ -2.47
SNORA40.14-201ENST00000516543 SETD3Q86TU7 594 aaPredicted RBP-0.38□□□□□ -2.47
SNORA40.14-201ENST00000516543 FAM81AQ8TBF8 368 aa-0.38□□□□□ -2.47
SNORA40.14-201ENST00000516543 PDCD6IPQ8WUM4 868 aaKnown RBP-0.38□□□□□ -2.47
SNORA40.14-201ENST00000516543 JSRP1Q96MG2 331 aaPredicted RBP-0.38□□□□□ -2.47
SNORA40.14-201ENST00000516543 RILPQ96NA2 401 aa-0.38□□□□□ -2.47
SNORA40.14-201ENST00000516543 PITX2Q99697 317 aa-0.38□□□□□ -2.47
SNORA40.14-201ENST00000516543 KRTAP2-4Q9BYR9 128 aa-0.38□□□□□ -2.47
SNORA40.14-201ENST00000516543 KRTAP2-1Q9BYU5 128 aa-0.38□□□□□ -2.47
SNORA40.14-201ENST00000516543 WDR55Q9H6Y2 383 aaPredicted RBP-0.38□□□□□ -2.47
SNORA40.14-201ENST00000516543 AP3M1Q9Y2T2 418 aa-0.38□□□□□ -2.47
SNORA40.14-201ENST00000516543 ADAMTSL1Q8N6G6 1762 aa-0.38□□□□□ -2.47
SNORA40.14-201ENST00000516543 EML5Q05BV3 1969 aa-0.38□□□□□ -2.47
SNORA40.14-201ENST00000516543 FSIP2Q5CZC0 6907 aa-0.38□□□□□ -2.47
SNORA40.14-201ENST00000516543 PTPRJQ12913 1337 aa-0.38□□□□□ -2.47
SNORA40.14-201ENST00000516543 ARGFXA6NJG6 315 aa-0.39□□□□□ -2.47
SNORA40.14-201ENST00000516543 C11orf86A6NJI1 115 aa-0.39□□□□□ -2.47
SNORA40.14-201ENST00000516543 CECR9P0C854 216 aa-0.39□□□□□ -2.47
SNORA40.14-201ENST00000516543 GPX2P18283 190 aa-0.39□□□□□ -2.47
SNORA40.14-201ENST00000516543 PRTN3P24158 256 aa-0.39□□□□□ -2.47
SNORA40.14-201ENST00000516543 IL12BP29460 328 aa-0.39□□□□□ -2.47
SNORA40.14-201ENST00000516543 MLF1P58340 268 aa-0.39□□□□□ -2.47
SNORA40.14-201ENST00000516543 BNIP2Q12982 314 aa-0.39□□□□□ -2.47
SNORA40.14-201ENST00000516543 NXNL2Q5VZ03 156 aa-0.39□□□□□ -2.47
Retrieved 100 of 20,778 RNA–protein pairs in 89.8 ms