RNA–Protein interactions for RNA: ENST00000508466.1

LIMCH1-207, Transcript of LIM and calponin homology domains 1, humanhuman

TSL 2

Gene LIMCH1, Length 3,051 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMCH1-207ENST00000508466 TMEM14AQ9Y6G1 99 aa6.31□□□□□ -1.4
LIMCH1-207ENST00000508466 DYSFO75923 2080 aa6.31□□□□□ -1.4
LIMCH1-207ENST00000508466 CFAP47Q6ZTR5 3102 aa6.3□□□□□ -1.4
LIMCH1-207ENST00000508466 KIR2DL5BA0A0G2JN68 375 aa6.3□□□□□ -1.4
LIMCH1-207ENST00000508466 KIR2DL5BA0A0G2JPC4 375 aa6.3□□□□□ -1.4
LIMCH1-207ENST00000508466 SERINC4A6NH21 518 aa6.3□□□□□ -1.4
LIMCH1-207ENST00000508466 PRRT4C9JH25 899 aa6.3□□□□□ -1.4
LIMCH1-207ENST00000508466 ADAM20O43506 726 aa6.3□□□□□ -1.4
LIMCH1-207ENST00000508466 RPS4Y1P22090 263 aaKnown RBP6.3□□□□□ -1.4
LIMCH1-207ENST00000508466 RAC1P63000 192 aa6.3□□□□□ -1.4
LIMCH1-207ENST00000508466 ZXDAP98168 799 aa6.3□□□□□ -1.4
LIMCH1-207ENST00000508466 HSF1Q00613 529 aa6.3□□□□□ -1.4
LIMCH1-207ENST00000508466 MFAP5Q13361 173 aa6.3□□□□□ -1.4
LIMCH1-207ENST00000508466 ZNF726P1Q15940 193 aa6.3□□□□□ -1.4
LIMCH1-207ENST00000508466 BSXQ3C1V8 233 aa6.3□□□□□ -1.4
LIMCH1-207ENST00000508466 ZNF440Q8IYI8 595 aa6.3□□□□□ -1.4
LIMCH1-207ENST00000508466 KIR2DL5AQ8N109 375 aa6.3□□□□□ -1.4
LIMCH1-207ENST00000508466 OR2T10Q8NGZ9 312 aa6.3□□□□□ -1.4
LIMCH1-207ENST00000508466 CMTM2Q8TAZ6 248 aa6.3□□□□□ -1.4
LIMCH1-207ENST00000508466 PTPMT1Q8WUK0 201 aaPredicted RBP6.3□□□□□ -1.4
LIMCH1-207ENST00000508466 DNASE2BQ8WZ79 361 aa6.3□□□□□ -1.4
LIMCH1-207ENST00000508466 PSMF1Q92530 271 aa6.3□□□□□ -1.4
LIMCH1-207ENST00000508466 EMG1Q92979 244 aaKnown RBP6.3□□□□□ -1.4
LIMCH1-207ENST00000508466 BOD1Q96IK1 185 aa6.3□□□□□ -1.4
LIMCH1-207ENST00000508466 SLC25A22Q9H936 323 aa6.3□□□□□ -1.4
LIMCH1-207ENST00000508466 TBX21Q9UL17 535 aa6.3□□□□□ -1.4
LIMCH1-207ENST00000508466 ZBTB32Q9Y2Y4 487 aaPredicted RBP6.3□□□□□ -1.4
LIMCH1-207ENST00000508466 LRRK1Q38SD2 2015 aa6.3□□□□□ -1.4
LIMCH1-207ENST00000508466 PRSS37A4D1T9 235 aa6.3□□□□□ -1.4
LIMCH1-207ENST00000508466 TGFBR3LH3BV60 316 aa6.3□□□□□ -1.4
LIMCH1-207ENST00000508466 SNAI2O43623 268 aa6.3□□□□□ -1.4
LIMCH1-207ENST00000508466 OPN1MWP04001 364 aa6.3□□□□□ -1.4
LIMCH1-207ENST00000508466 APODP05090 189 aa6.3□□□□□ -1.4
LIMCH1-207ENST00000508466 CTSDP07339 412 aaPredicted RBP6.3□□□□□ -1.4
LIMCH1-207ENST00000508466 OPN1MW2P0DN77 364 aa6.3□□□□□ -1.4
LIMCH1-207ENST00000508466 OPN1MW3P0DN78 364 aa6.3□□□□□ -1.4
LIMCH1-207ENST00000508466 TDGF1P13385 188 aa6.3□□□□□ -1.4
LIMCH1-207ENST00000508466 CEBPBP17676 345 aa6.3□□□□□ -1.4
LIMCH1-207ENST00000508466 SFTPDP35247 375 aa6.3□□□□□ -1.4
LIMCH1-207ENST00000508466 ADMP35318 185 aa6.3□□□□□ -1.4
LIMCH1-207ENST00000508466 SEC13P55735 322 aa6.3□□□□□ -1.4
LIMCH1-207ENST00000508466 SELENOTP62341 195 aa6.3□□□□□ -1.4
LIMCH1-207ENST00000508466 TRA2BP62995 288 aaKnown RBP6.3□□□□□ -1.4
LIMCH1-207ENST00000508466 FOXK1P85037 733 aa6.3□□□□□ -1.4
LIMCH1-207ENST00000508466 PRTGQ2VWP7 1150 aa6.3□□□□□ -1.4
LIMCH1-207ENST00000508466 TMEM52BQ4KMG9 183 aa6.3□□□□□ -1.4
LIMCH1-207ENST00000508466 ZNF506Q5JVG8 444 aa6.3□□□□□ -1.4
LIMCH1-207ENST00000508466 LINC00114Q6XXX2 140 aa6.3□□□□□ -1.4
LIMCH1-207ENST00000508466 LIN28BQ6ZN17 250 aaKnown RBP eCLIP6.3□□□□□ -1.4
LIMCH1-207ENST00000508466 ZDHHC23Q8IYP9 409 aa6.3□□□□□ -1.4
LIMCH1-207ENST00000508466 LRRC75AQ8NAA5 344 aa6.3□□□□□ -1.4
LIMCH1-207ENST00000508466 BCL2L2Q92843 193 aaPredicted RBP6.3□□□□□ -1.4
LIMCH1-207ENST00000508466 IRF7Q92985 503 aa6.3□□□□□ -1.4
LIMCH1-207ENST00000508466 TECTBQ96PL2 329 aa6.3□□□□□ -1.4
LIMCH1-207ENST00000508466 GPR84Q9NQS5 396 aa6.3□□□□□ -1.4
LIMCH1-207ENST00000508466 SERGEFQ9UGK8 458 aa6.3□□□□□ -1.4
LIMCH1-207ENST00000508466 IL19Q9UHD0 177 aa6.3□□□□□ -1.4
LIMCH1-207ENST00000508466 TRBV24-1A0A075B6N3 115 aa6.29□□□□□ -1.4
LIMCH1-207ENST00000508466 LOC102723971A0A1B0GUV8 181 aa6.29□□□□□ -1.4
LIMCH1-207ENST00000508466 F6UZH7 168 aa6.29□□□□□ -1.4
LIMCH1-207ENST00000508466 H0Y8X5 98 aa6.29□□□□□ -1.4
LIMCH1-207ENST00000508466 M0QZK8 103 aa6.29□□□□□ -1.4
LIMCH1-207ENST00000508466 MSTNO14793 375 aa6.29□□□□□ -1.4
LIMCH1-207ENST00000508466 RER1O15258 196 aa6.29□□□□□ -1.4
LIMCH1-207ENST00000508466 GGCTO75223 188 aaKnown RBP6.29□□□□□ -1.4
LIMCH1-207ENST00000508466 GPR75O95800 540 aa6.29□□□□□ -1.4
LIMCH1-207ENST00000508466 HSPB1P04792 205 aaKnown RBP6.29□□□□□ -1.4
LIMCH1-207ENST00000508466 C1QTNF9P0C862 333 aa6.29□□□□□ -1.4
LIMCH1-207ENST00000508466 ZNF728P0DKX0 622 aa6.29□□□□□ -1.4
LIMCH1-207ENST00000508466 FCGR2AP12318 317 aa6.29□□□□□ -1.4
LIMCH1-207ENST00000508466 GNRHRP30968 328 aa6.29□□□□□ -1.4
LIMCH1-207ENST00000508466 HNRNPA3P51991 378 aaKnown RBP6.29□□□□□ -1.4
LIMCH1-207ENST00000508466 RPL23P62829 140 aaKnown RBP6.29□□□□□ -1.4
LIMCH1-207ENST00000508466 UBE2V1Q13404 147 aa6.29□□□□□ -1.4
LIMCH1-207ENST00000508466 IL13RA2Q14627 380 aa6.29□□□□□ -1.4
LIMCH1-207ENST00000508466 TMEM241Q24JQ0 296 aa6.29□□□□□ -1.4
LIMCH1-207ENST00000508466 HLA-BQ31612 363 aa6.29□□□□□ -1.4
LIMCH1-207ENST00000508466 FBLN7Q53RD9 439 aa6.29□□□□□ -1.4
LIMCH1-207ENST00000508466 PHF19Q5T6S3 580 aa6.29□□□□□ -1.4
LIMCH1-207ENST00000508466 FHL5Q5TD97 284 aa6.29□□□□□ -1.4
LIMCH1-207ENST00000508466 ZNF468Q5VIY5 522 aaPredicted RBP6.29□□□□□ -1.4
LIMCH1-207ENST00000508466 BCORP1Q8N888 145 aa6.29□□□□□ -1.4
LIMCH1-207ENST00000508466 DTWD2Q8NBA8 298 aa6.29□□□□□ -1.4
LIMCH1-207ENST00000508466 OR5D14Q8NGL3 314 aa6.29□□□□□ -1.4
LIMCH1-207ENST00000508466 OR5D13Q8NGL4 314 aa6.29□□□□□ -1.4
LIMCH1-207ENST00000508466 OR52N5Q8NH56 324 aa6.29□□□□□ -1.4
LIMCH1-207ENST00000508466 CXorf40AQ8TE69 158 aa6.29□□□□□ -1.4
LIMCH1-207ENST00000508466 PBOV1Q9GZY1 135 aa6.29□□□□□ -1.4
LIMCH1-207ENST00000508466 OR10A2Q9H208 303 aa6.29□□□□□ -1.4
LIMCH1-207ENST00000508466 TMEM106BQ9NUM4 274 aa6.29□□□□□ -1.4
LIMCH1-207ENST00000508466 P4HTMQ9NXG6 502 aa6.29□□□□□ -1.4
LIMCH1-207ENST00000508466 LAMTOR2Q9Y2Q5 125 aa6.29□□□□□ -1.4
LIMCH1-207ENST00000508466 MTCH2Q9Y6C9 303 aa6.29□□□□□ -1.4
LIMCH1-207ENST00000508466 R4GMQ9 66 aa6.29□□□□□ -1.4
LIMCH1-207ENST00000508466 DOCK7Q96N67 2140 aa6.29□□□□□ -1.4
LIMCH1-207ENST00000508466 COL4A4P53420 1690 aaPredicted RBP6.29□□□□□ -1.4
LIMCH1-207ENST00000508466 F5H5K5 113 aa6.29□□□□□ -1.4
LIMCH1-207ENST00000508466 H3BML4 177 aa6.29□□□□□ -1.4
LIMCH1-207ENST00000508466 SLC17A3O00476 420 aa6.29□□□□□ -1.4
LIMCH1-207ENST00000508466 GNG7O60262 68 aa6.29□□□□□ -1.4
Retrieved 100 of 20,778 RNA–protein pairs in 51.5 ms