RNA–Protein interactions for RNA: ENST00000507459.5

CCHCR1-222, Transcript of coiled-coil alpha-helical rod protein 1, human

TSL 5

Gene CCHCR1, Length 582 nt, Biotype nonsense mediated decay.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CCHCR1-222	ENST00000507459	IGHV2-26	A0A0B4J1V2	119 aa		11.47	□□□□□ -0.57
CCHCR1-222	ENST00000507459	FAM172BP	A6NC97	362 aa		11.47	□□□□□ -0.57
CCHCR1-222	ENST00000507459	POM121C	A8CG34	1229 aa		11.47	□□□□□ -0.57
CCHCR1-222	ENST00000507459	ODF3B	A8MYP8	253 aa		11.47	□□□□□ -0.57
CCHCR1-222	ENST00000507459	GEMIN2	O14893	280 aa	Known RBP	11.47	□□□□□ -0.57
CCHCR1-222	ENST00000507459	NDUFA7	O95182	113 aa		11.47	□□□□□ -0.57
CCHCR1-222	ENST00000507459	HSMCR30	P0CW71	290 aa		11.47	□□□□□ -0.57
CCHCR1-222	ENST00000507459	CDK2	P24941	298 aa		11.47	□□□□□ -0.57
CCHCR1-222	ENST00000507459	MAPK3	P27361	379 aa	Predicted RBP	11.47	□□□□□ -0.57
CCHCR1-222	ENST00000507459	RBM11	P57052	281 aa	Known RBP	11.47	□□□□□ -0.57
CCHCR1-222	ENST00000507459	RPL15	P61313	204 aa	Known RBP	11.47	□□□□□ -0.57
CCHCR1-222	ENST00000507459	IRF3	Q14653	427 aa		11.47	□□□□□ -0.57
CCHCR1-222	ENST00000507459	FAM189A2	Q15884	450 aa		11.47	□□□□□ -0.57
CCHCR1-222	ENST00000507459	SSX2	Q16385	188 aa		11.47	□□□□□ -0.57
CCHCR1-222	ENST00000507459	ZNF626	Q68DY1	528 aa		11.47	□□□□□ -0.57
CCHCR1-222	ENST00000507459	GLIPR1L1	Q6UWM5	242 aa		11.47	□□□□□ -0.57
CCHCR1-222	ENST00000507459	DYNAP	Q8N1N2	210 aa		11.47	□□□□□ -0.57
CCHCR1-222	ENST00000507459	CORO2A	Q92828	525 aa		11.47	□□□□□ -0.57
CCHCR1-222	ENST00000507459	BARHL1	Q9BZE3	327 aa		11.47	□□□□□ -0.57
CCHCR1-222	ENST00000507459	SLITRK2	Q9H156	845 aa		11.47	□□□□□ -0.57
CCHCR1-222	ENST00000507459	TMEM133	Q9H2Q1	129 aa		11.47	□□□□□ -0.57
CCHCR1-222	ENST00000507459	PCDHB16	Q9NRJ7	776 aa		11.47	□□□□□ -0.57
CCHCR1-222	ENST00000507459	IL36G	Q9NZH8	169 aa		11.47	□□□□□ -0.57
CCHCR1-222	ENST00000507459	KIF25	Q9UIL4	384 aa		11.47	□□□□□ -0.57
CCHCR1-222	ENST00000507459	MRPS28	Q9Y2Q9	187 aa	Known RBP	11.47	□□□□□ -0.57
CCHCR1-222	ENST00000507459		A0A1B0GUS0	222 aa		11.46	□□□□□ -0.57
CCHCR1-222	ENST00000507459	FAM90A8P	A6NJQ4	464 aa		11.46	□□□□□ -0.57
CCHCR1-222	ENST00000507459	ZNF780A	O75290	641 aa	Predicted RBP	11.46	□□□□□ -0.57
CCHCR1-222	ENST00000507459	GTF2F2	P13984	249 aa		11.46	□□□□□ -0.57
CCHCR1-222	ENST00000507459	CRHBP	P24387	322 aa		11.46	□□□□□ -0.57
CCHCR1-222	ENST00000507459	GDNF	P39905	211 aa		11.46	□□□□□ -0.57
CCHCR1-222	ENST00000507459	GLP1R	P43220	463 aa		11.46	□□□□□ -0.57
CCHCR1-222	ENST00000507459	RAB13	P51153	203 aa		11.46	□□□□□ -0.57
CCHCR1-222	ENST00000507459	LDLRAD2	Q5SZI1	272 aa		11.46	□□□□□ -0.57
CCHCR1-222	ENST00000507459	ATAD3C	Q5T2N8	411 aa		11.46	□□□□□ -0.57
CCHCR1-222	ENST00000507459	FAM27D1	Q5T7N8	215 aa		11.46	□□□□□ -0.57
CCHCR1-222	ENST00000507459	LIPK	Q5VXJ0	399 aa		11.46	□□□□□ -0.57
CCHCR1-222	ENST00000507459	OLFML2A	Q68BL7	652 aa		11.46	□□□□□ -0.57
CCHCR1-222	ENST00000507459	AWAT2	Q6E213	333 aa		11.46	□□□□□ -0.57
CCHCR1-222	ENST00000507459	BRICD5	Q6PL45	260 aa		11.46	□□□□□ -0.57
CCHCR1-222	ENST00000507459	SHISA2	Q6UWI4	295 aa		11.46	□□□□□ -0.57
CCHCR1-222	ENST00000507459	HEPN1	Q6WQI6	88 aa		11.46	□□□□□ -0.57
CCHCR1-222	ENST00000507459		Q6ZSV7	163 aa		11.46	□□□□□ -0.57
CCHCR1-222	ENST00000507459	ABHD12	Q8N2K0	398 aa		11.46	□□□□□ -0.57
CCHCR1-222	ENST00000507459	MS4A15	Q8N5U1	240 aa		11.46	□□□□□ -0.57
CCHCR1-222	ENST00000507459	SUMF2	Q8NBJ7	301 aa		11.46	□□□□□ -0.57
CCHCR1-222	ENST00000507459	OR4D6	Q8NGJ1	314 aa		11.46	□□□□□ -0.57
CCHCR1-222	ENST00000507459	NDNF	Q8TB73	568 aa		11.46	□□□□□ -0.57
CCHCR1-222	ENST00000507459	PLPPR1	Q8TBJ4	325 aa		11.46	□□□□□ -0.57
CCHCR1-222	ENST00000507459	THRSP	Q92748	146 aa		11.46	□□□□□ -0.57
CCHCR1-222	ENST00000507459	UFD1	Q92890	307 aa		11.46	□□□□□ -0.57
CCHCR1-222	ENST00000507459	TMEM203	Q969S6	136 aa		11.46	□□□□□ -0.57
CCHCR1-222	ENST00000507459	MALSU1	Q96EH3	234 aa		11.46	□□□□□ -0.57
CCHCR1-222	ENST00000507459	DPCD	Q9BVM2	203 aa	Predicted RBP	11.46	□□□□□ -0.57
CCHCR1-222	ENST00000507459	CLEC7A	Q9BXN2	247 aa		11.46	□□□□□ -0.57
CCHCR1-222	ENST00000507459	TCF7L1	Q9HCS4	588 aa		11.46	□□□□□ -0.57
CCHCR1-222	ENST00000507459	TAS2R3	Q9NYW6	316 aa		11.46	□□□□□ -0.57
CCHCR1-222	ENST00000507459	OR6C3	Q9NZP0	311 aa		11.46	□□□□□ -0.57
CCHCR1-222	ENST00000507459	TBL2	Q9Y4P3	447 aa	Known RBP	11.46	□□□□□ -0.57
CCHCR1-222	ENST00000507459	HILPDA	Q9Y5L2	63 aa		11.46	□□□□□ -0.57
CCHCR1-222	ENST00000507459	MMP24	Q9Y5R2	645 aa		11.46	□□□□□ -0.57
CCHCR1-222	ENST00000507459	TRAV39	A0A0B4J263	110 aa		11.45	□□□□□ -0.58
CCHCR1-222	ENST00000507459	CLPSL1	A2RUU4	121 aa		11.45	□□□□□ -0.58
CCHCR1-222	ENST00000507459	NFYB	P25208	207 aa		11.45	□□□□□ -0.58
CCHCR1-222	ENST00000507459	VHL	P40337	213 aa		11.45	□□□□□ -0.58
CCHCR1-222	ENST00000507459	MAP2K4	P45985	399 aa		11.45	□□□□□ -0.58
CCHCR1-222	ENST00000507459	SRSF4	Q08170	494 aa	Known RBP	11.45	□□□□□ -0.58
CCHCR1-222	ENST00000507459	GPR176	Q14439	515 aa		11.45	□□□□□ -0.58
CCHCR1-222	ENST00000507459	C17orf58	Q2M2W7	97 aa		11.45	□□□□□ -0.58
CCHCR1-222	ENST00000507459	OR52W1	Q6IF63	320 aa		11.45	□□□□□ -0.58
CCHCR1-222	ENST00000507459	UNQ9370/PRO34162	Q6UXP9	181 aa		11.45	□□□□□ -0.58
CCHCR1-222	ENST00000507459	CEACAM19	Q7Z692	300 aa		11.45	□□□□□ -0.58
CCHCR1-222	ENST00000507459	ZNF565	Q8N9K5	539 aa		11.45	□□□□□ -0.58
CCHCR1-222	ENST00000507459	OR13A1	Q8NGR1	328 aa		11.45	□□□□□ -0.58
CCHCR1-222	ENST00000507459	LINC01006	Q8NI28	216 aa		11.45	□□□□□ -0.58
CCHCR1-222	ENST00000507459	NEK7	Q8TDX7	302 aa		11.45	□□□□□ -0.58
CCHCR1-222	ENST00000507459	FOXRED1	Q96CU9	486 aa	Predicted RBP	11.45	□□□□□ -0.58
CCHCR1-222	ENST00000507459	BANF2	Q9H503	90 aa		11.45	□□□□□ -0.58
CCHCR1-222	ENST00000507459	ABCB10	Q9NRK6	738 aa		11.45	□□□□□ -0.58
CCHCR1-222	ENST00000507459	RAB26	Q9ULW5	256 aa		11.45	□□□□□ -0.58
CCHCR1-222	ENST00000507459	RNF114	Q9Y508	228 aa		11.45	□□□□□ -0.58
CCHCR1-222	ENST00000507459	KBTBD11-OT1	A0A1B0GTJ5	212 aa		11.44	□□□□□ -0.58
CCHCR1-222	ENST00000507459	ZNF729	A6NN14	1252 aa	Predicted RBP	11.44	□□□□□ -0.58
CCHCR1-222	ENST00000507459	JUNB	P17275	347 aa	Predicted RBP	11.44	□□□□□ -0.58
CCHCR1-222	ENST00000507459	KCNJ3	P48549	501 aa		11.44	□□□□□ -0.58
CCHCR1-222	ENST00000507459	AANAT	Q16613	207 aa		11.44	□□□□□ -0.58
CCHCR1-222	ENST00000507459	LTC4S	Q16873	150 aa		11.44	□□□□□ -0.58
CCHCR1-222	ENST00000507459	NHLRC3	Q5JS37	347 aa		11.44	□□□□□ -0.58
CCHCR1-222	ENST00000507459	RBM48	Q5RL73	367 aa	Known RBP	11.44	□□□□□ -0.58
CCHCR1-222	ENST00000507459	RSBN1	Q5VWQ0	802 aa	Predicted RBP	11.44	□□□□□ -0.58
CCHCR1-222	ENST00000507459	PRSS48	Q7RTY5	328 aa		11.44	□□□□□ -0.58
CCHCR1-222	ENST00000507459	LINC00596	Q86U02	117 aa		11.44	□□□□□ -0.58
CCHCR1-222	ENST00000507459	CDH26	Q8IXH8	852 aa		11.44	□□□□□ -0.58
CCHCR1-222	ENST00000507459	NKAIN3	Q8N8D7	197 aa		11.44	□□□□□ -0.58
CCHCR1-222	ENST00000507459	MRGPRD	Q8TDS7	321 aa		11.44	□□□□□ -0.58
CCHCR1-222	ENST00000507459	MEGF11	A6BM72	1044 aa		11.43	□□□□□ -0.58
CCHCR1-222	ENST00000507459	TOR1A	O14656	332 aa		11.43	□□□□□ -0.58
CCHCR1-222	ENST00000507459	CRTAP	O75718	401 aa	Predicted RBP	11.43	□□□□□ -0.58
CCHCR1-222	ENST00000507459	HTR1D	P28221	377 aa		11.43	□□□□□ -0.58
CCHCR1-222	ENST00000507459	GP2	P55259	537 aa	Known RBP	11.43	□□□□□ -0.58

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