RNA–Protein interactions for RNA: ENST00000467464.1

PTPRF-211, Transcript of protein tyrosine phosphatase, receptor type F, humanhuman

TSL 3

Gene PTPRF, Length 571 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRF-211ENST00000467464 MYCBPQ99417 103 aaPredicted RBP9.56□□□□□ -0.88
PTPRF-211ENST00000467464 CITED2Q99967 270 aaPredicted RBP9.56□□□□□ -0.88
PTPRF-211ENST00000467464 NCOR1P1Q9H4R4 102 aa9.56□□□□□ -0.88
PTPRF-211ENST00000467464 LIN7BQ9HAP6 207 aa9.56□□□□□ -0.88
PTPRF-211ENST00000467464 SMPD3Q9NY59 655 aaPredicted RBP9.56□□□□□ -0.88
PTPRF-211ENST00000467464 TAS2R4Q9NYW5 299 aa9.56□□□□□ -0.88
PTPRF-211ENST00000467464 KIF25Q9UIL4 384 aa9.56□□□□□ -0.88
PTPRF-211ENST00000467464 KBTBD11-OT1A0A1B0GTJ5 212 aa9.55□□□□□ -0.88
PTPRF-211ENST00000467464 NPIPB11E5RHQ5 1161 aa9.55□□□□□ -0.88
PTPRF-211ENST00000467464 BUB1B-PAK6H3BSN5 160 aa9.55□□□□□ -0.88
PTPRF-211ENST00000467464 HSPB6O14558 160 aa9.55□□□□□ -0.88
PTPRF-211ENST00000467464 OGG1O15527 345 aa9.55□□□□□ -0.88
PTPRF-211ENST00000467464 DCKP27707 260 aa9.55□□□□□ -0.88
PTPRF-211ENST00000467464 VDAC2P45880 294 aaPredicted RBP9.55□□□□□ -0.88
PTPRF-211ENST00000467464 OR3A4PP47883 348 aa9.55□□□□□ -0.88
PTPRF-211ENST00000467464 DOC2BQ14184 412 aa9.55□□□□□ -0.88
PTPRF-211ENST00000467464 NSUN5P1Q3KNT7 163 aa9.55□□□□□ -0.88
PTPRF-211ENST00000467464 CCDC58Q4VC31 144 aa9.55□□□□□ -0.88
PTPRF-211ENST00000467464 KLHL22Q53GT1 634 aa9.55□□□□□ -0.88
PTPRF-211ENST00000467464 NHLRC3Q5JS37 347 aa9.55□□□□□ -0.88
PTPRF-211ENST00000467464 RPL22L1Q6P5R6 122 aaKnown RBP9.55□□□□□ -0.88
PTPRF-211ENST00000467464 C16orf82Q7Z2V1 217 aa9.55□□□□□ -0.88
PTPRF-211ENST00000467464 C10orf67Q8IYJ2 551 aa9.55□□□□□ -0.88
PTPRF-211ENST00000467464 ZNF596Q8TC21 504 aa9.55□□□□□ -0.88
PTPRF-211ENST00000467464 TNFAIP8L1Q8WVP5 186 aa9.55□□□□□ -0.88
PTPRF-211ENST00000467464 TMEM106AQ96A25 262 aa9.55□□□□□ -0.88
PTPRF-211ENST00000467464 ORAI1Q96D31 301 aa9.55□□□□□ -0.88
PTPRF-211ENST00000467464 ING3Q9NXR8 418 aa9.55□□□□□ -0.88
PTPRF-211ENST00000467464 CALYQ9NYX4 217 aa9.55□□□□□ -0.88
PTPRF-211ENST00000467464 OR6C3Q9NZP0 311 aa9.55□□□□□ -0.88
PTPRF-211ENST00000467464 DIMT1Q9UNQ2 313 aaKnown RBP9.55□□□□□ -0.88
PTPRF-211ENST00000467464 DSCAML1Q8TD84 2053 aa9.54□□□□□ -0.88
PTPRF-211ENST00000467464 TRBV5-5A0A0J9YX44 114 aa9.54□□□□□ -0.88
PTPRF-211ENST00000467464 FAM90A18PA6NE21 464 aa9.54□□□□□ -0.88
PTPRF-211ENST00000467464 FAM90A16PA6NEW6 464 aa9.54□□□□□ -0.88
PTPRF-211ENST00000467464 FAM90A20PA6NIJ5 464 aa9.54□□□□□ -0.88
PTPRF-211ENST00000467464 FAM90A9PA6NNJ1 464 aa9.54□□□□□ -0.88
PTPRF-211ENST00000467464 FAM90A12PA8MX19 464 aa9.54□□□□□ -0.88
PTPRF-211ENST00000467464 FAM90A5PA8MXJ8 464 aa9.54□□□□□ -0.88
PTPRF-211ENST00000467464 LEUTXA8MZ59 168 aa9.54□□□□□ -0.88
PTPRF-211ENST00000467464 OR2F2O95006 317 aa9.54□□□□□ -0.88
PTPRF-211ENST00000467464 IL1AP01583 271 aa9.54□□□□□ -0.88
PTPRF-211ENST00000467464 ALDOBP05062 364 aa9.54□□□□□ -0.88
PTPRF-211ENST00000467464 FAM90A15PP0C7V4 464 aa9.54□□□□□ -0.88
PTPRF-211ENST00000467464 FAM90A13PP0C7W8 464 aa9.54□□□□□ -0.88
PTPRF-211ENST00000467464 FAM90A14PP0C7W9 464 aa9.54□□□□□ -0.88
PTPRF-211ENST00000467464 FAM90A24PP0C7X0 464 aa9.54□□□□□ -0.88
PTPRF-211ENST00000467464 IGFBP3P17936 291 aaPredicted RBP9.54□□□□□ -0.88
PTPRF-211ENST00000467464 GLP1RP43220 463 aa9.54□□□□□ -0.88
PTPRF-211ENST00000467464 RPS11P62280 158 aaKnown RBP eCLIP9.54□□□□□ -0.88
PTPRF-211ENST00000467464 CD83Q01151 205 aa9.54□□□□□ -0.88
PTPRF-211ENST00000467464 PAN3Q58A45 887 aaKnown RBP9.54□□□□□ -0.88
PTPRF-211ENST00000467464 DMKNQ6E0U4 476 aaPredicted RBP9.54□□□□□ -0.88
PTPRF-211ENST00000467464 LAIR2Q6ISS4 152 aa9.54□□□□□ -0.88
PTPRF-211ENST00000467464 OR4D6Q8NGJ1 314 aa9.54□□□□□ -0.88
PTPRF-211ENST00000467464 OR13C5Q8NGS8 318 aa9.54□□□□□ -0.88
PTPRF-211ENST00000467464 GPR148Q8TDV2 347 aa9.54□□□□□ -0.88
PTPRF-211ENST00000467464 SMIM19Q96E16 107 aa9.54□□□□□ -0.88
PTPRF-211ENST00000467464 PGLYRP3Q96LB9 341 aa9.54□□□□□ -0.88
PTPRF-211ENST00000467464 RBM14Q96PK6 669 aaKnown RBP9.54□□□□□ -0.88
PTPRF-211ENST00000467464 NR1H4Q96RI1 486 aaPredicted RBP9.54□□□□□ -0.88
PTPRF-211ENST00000467464 IFT22Q9H7X7 185 aa9.54□□□□□ -0.88
PTPRF-211ENST00000467464 IL36GQ9NZH8 169 aa9.54□□□□□ -0.88
PTPRF-211ENST00000467464 CLEC2DQ9UHP7 191 aa9.54□□□□□ -0.88
PTPRF-211ENST00000467464 TET2Q6N021 2002 aaPredicted RBP9.53□□□□□ -0.88
PTPRF-211ENST00000467464 MEIKINA0A087WXM9 373 aa9.53□□□□□ -0.88
PTPRF-211ENST00000467464 A0A1W2PPI3 338 aa9.53□□□□□ -0.88
PTPRF-211ENST00000467464 MAGEA13PA6NCF6 341 aa9.53□□□□□ -0.88
PTPRF-211ENST00000467464 SH2D7A6NKC9 451 aaPredicted RBP9.53□□□□□ -0.88
PTPRF-211ENST00000467464 OOSP1A8MZH6 123 aa9.53□□□□□ -0.88
PTPRF-211ENST00000467464 GPX5O75715 221 aa9.53□□□□□ -0.88
PTPRF-211ENST00000467464 CDRT1O95170 752 aa9.53□□□□□ -0.88
PTPRF-211ENST00000467464 KCNJ3P48549 501 aa9.53□□□□□ -0.88
PTPRF-211ENST00000467464 RBM11P57052 281 aaKnown RBP9.53□□□□□ -0.88
PTPRF-211ENST00000467464 ADARB1P78563 741 aaKnown RBP9.53□□□□□ -0.88
PTPRF-211ENST00000467464 DIAPH2-AS1Q14236 149 aa9.53□□□□□ -0.88
PTPRF-211ENST00000467464 C10orf99Q6UWK7 81 aa9.53□□□□□ -0.88
PTPRF-211ENST00000467464 SATL1Q86VE3 508 aa9.53□□□□□ -0.88
PTPRF-211ENST00000467464 OR52N1Q8NH53 320 aa9.53□□□□□ -0.88
PTPRF-211ENST00000467464 LEAP2Q969E1 77 aa9.53□□□□□ -0.88
PTPRF-211ENST00000467464 SLC25A33Q9BSK2 321 aa9.53□□□□□ -0.88
PTPRF-211ENST00000467464 BABAM2Q9NXR7 383 aa9.53□□□□□ -0.88
PTPRF-211ENST00000467464 IDI2-AS1Q9NZ38 188 aa9.53□□□□□ -0.88
PTPRF-211ENST00000467464 TRAV8-7A0A075B6U6 113 aa9.52□□□□□ -0.89
PTPRF-211ENST00000467464 TRBV5-7A0A0A0MS05 114 aa9.52□□□□□ -0.89
PTPRF-211ENST00000467464 TRAV39A0A0B4J263 110 aa9.52□□□□□ -0.89
PTPRF-211ENST00000467464 J3QR06 171 aa9.52□□□□□ -0.89
PTPRF-211ENST00000467464 EBAG9O00559 213 aa9.52□□□□□ -0.89
PTPRF-211ENST00000467464 BAG2O95816 211 aa9.52□□□□□ -0.89
PTPRF-211ENST00000467464 PRB2P02812 416 aaPredicted RBP9.52□□□□□ -0.89
PTPRF-211ENST00000467464 NFYBP25208 207 aa9.52□□□□□ -0.89
PTPRF-211ENST00000467464 BRS3P32247 399 aa9.52□□□□□ -0.89
PTPRF-211ENST00000467464 SSTR5P35346 364 aa9.52□□□□□ -0.89
PTPRF-211ENST00000467464 CEACAM3P40198 252 aa9.52□□□□□ -0.89
PTPRF-211ENST00000467464 EMX1Q04741 257 aaPredicted RBP9.52□□□□□ -0.89
PTPRF-211ENST00000467464 RSU1Q15404 277 aa9.52□□□□□ -0.89
PTPRF-211ENST00000467464 ABCA11PQ4W5N1 156 aa9.52□□□□□ -0.89
PTPRF-211ENST00000467464 OXLD1Q5BKU9 147 aa9.52□□□□□ -0.89
PTPRF-211ENST00000467464 DDI2Q5TDH0 399 aa9.52□□□□□ -0.89
PTPRF-211ENST00000467464 Q6ZPA2 131 aa9.52□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 68.2 ms