RNA–Protein interactions for RNA: ENST00000378125.4

PCDHA4-201, Transcript of protocadherin alpha 4, humanhuman

TSL 5 BASIC

Gene PCDHA4, Length 2,328 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHA4-201ENST00000378125 SPEF1Q9Y4P9 236 aa16.4■□□□□ 0.22
PCDHA4-201ENST00000378125 C3orf85A0A1B0GTC6 90 aa16.39■□□□□ 0.21
PCDHA4-201ENST00000378125 MPPED1O15442 326 aa16.39■□□□□ 0.21
PCDHA4-201ENST00000378125 IGHG3P01860 377 aa16.39■□□□□ 0.21
PCDHA4-201ENST00000378125 PMELP40967 661 aa16.39■□□□□ 0.21
PCDHA4-201ENST00000378125 TGFBR3Q03167 851 aa16.39■□□□□ 0.21
PCDHA4-201ENST00000378125 FOXF2Q12947 444 aa16.39■□□□□ 0.21
PCDHA4-201ENST00000378125 TMEM268Q5VZI3 342 aa16.39■□□□□ 0.21
PCDHA4-201ENST00000378125 TBC1D26Q86UD7 250 aa16.39■□□□□ 0.21
PCDHA4-201ENST00000378125 UBALD1Q8TB05 177 aa16.39■□□□□ 0.21
PCDHA4-201ENST00000378125 DNAJB11Q9UBS4 358 aa16.39■□□□□ 0.21
PCDHA4-201ENST00000378125 ZFHX2Q9C0A1 2572 aaPredicted RBP16.39■□□□□ 0.21
PCDHA4-201ENST00000378125 OR5B21A6NL26 309 aa16.39■□□□□ 0.21
PCDHA4-201ENST00000378125 H0YL77 283 aa16.39■□□□□ 0.21
PCDHA4-201ENST00000378125 NUPL2O15504 423 aaKnown RBP16.39■□□□□ 0.21
PCDHA4-201ENST00000378125 FBXO24O75426 580 aa16.39■□□□□ 0.21
PCDHA4-201ENST00000378125 HOXD4P09016 255 aaPredicted RBP16.39■□□□□ 0.21
PCDHA4-201ENST00000378125 UCP3P55916 312 aa16.39■□□□□ 0.21
PCDHA4-201ENST00000378125 LGI3Q8N145 548 aa16.39■□□□□ 0.21
PCDHA4-201ENST00000378125 GAPTQ8N292 157 aa16.39■□□□□ 0.21
PCDHA4-201ENST00000378125 PRR18Q8N4B5 295 aa16.39■□□□□ 0.21
PCDHA4-201ENST00000378125 EIF4E3Q8N5X7 224 aaKnown RBP16.39■□□□□ 0.21
PCDHA4-201ENST00000378125 ZNF565Q8N9K5 539 aa16.39■□□□□ 0.21
PCDHA4-201ENST00000378125 CCDC71LQ8N9Z2 235 aa16.39■□□□□ 0.21
PCDHA4-201ENST00000378125 OR1J1Q8NGS3 322 aa16.39■□□□□ 0.21
PCDHA4-201ENST00000378125 MRPL30Q8TCC3 161 aaKnown RBP16.39■□□□□ 0.21
PCDHA4-201ENST00000378125 FBXL17Q9UF56 701 aa16.39■□□□□ 0.21
PCDHA4-201ENST00000378125 SIRPB1O00241 398 aa16.38■□□□□ 0.21
PCDHA4-201ENST00000378125 GABRA6Q16445 453 aa16.38■□□□□ 0.21
PCDHA4-201ENST00000378125 ATRAIDQ6UW56 229 aa16.38■□□□□ 0.21
PCDHA4-201ENST00000378125 IL1F10Q8WWZ1 152 aa16.38■□□□□ 0.21
PCDHA4-201ENST00000378125 TAF9BQ9HBM6 251 aa16.38■□□□□ 0.21
PCDHA4-201ENST00000378125 CCL28Q9NRJ3 127 aa16.38■□□□□ 0.21
PCDHA4-201ENST00000378125 MGAQ8IWI9 3026 aa16.38■□□□□ 0.21
PCDHA4-201ENST00000378125 ZNF292O60281 2723 aa16.38■□□□□ 0.21
PCDHA4-201ENST00000378125 ZNF705EA8MWA4 302 aaPredicted RBP16.37■□□□□ 0.21
PCDHA4-201ENST00000378125 TRDCB7Z8K6 153 aa16.37■□□□□ 0.21
PCDHA4-201ENST00000378125 CDIPTO14735 213 aa16.37■□□□□ 0.21
PCDHA4-201ENST00000378125 SLC34A2O95436 690 aa16.37■□□□□ 0.21
PCDHA4-201ENST00000378125 GRPP07492 148 aa16.37■□□□□ 0.21
PCDHA4-201ENST00000378125 TMEM33P57088 247 aa16.37■□□□□ 0.21
PCDHA4-201ENST00000378125 NAAAQ02083 359 aa16.37■□□□□ 0.21
PCDHA4-201ENST00000378125 IL24Q13007 206 aa16.37■□□□□ 0.21
PCDHA4-201ENST00000378125 CXorf67Q86X51 503 aaPredicted RBP16.37■□□□□ 0.21
PCDHA4-201ENST00000378125 SCCPDHQ8NBX0 429 aa16.37■□□□□ 0.21
PCDHA4-201ENST00000378125 RNF141Q8WVD5 230 aa16.37■□□□□ 0.21
PCDHA4-201ENST00000378125 ERGIC1Q969X5 290 aa16.37■□□□□ 0.21
PCDHA4-201ENST00000378125 DLL3Q9NYJ7 618 aa16.37■□□□□ 0.21
PCDHA4-201ENST00000378125 FZR1Q9UM11 496 aa16.37■□□□□ 0.21
PCDHA4-201ENST00000378125 TRAV17A0A0B4J275 112 aa16.37■□□□□ 0.21
PCDHA4-201ENST00000378125 B8ZZF3 427 aa16.37■□□□□ 0.21
PCDHA4-201ENST00000378125 DEGS1O15121 323 aa16.37■□□□□ 0.21
PCDHA4-201ENST00000378125 FGF16O43320 207 aa16.37■□□□□ 0.21
PCDHA4-201ENST00000378125 KIR2DL2P43627 348 aaPredicted RBP16.37■□□□□ 0.21
PCDHA4-201ENST00000378125 MRPL49Q13405 166 aaKnown RBP16.37■□□□□ 0.21
PCDHA4-201ENST00000378125 FBXW12Q6X9E4 464 aa16.37■□□□□ 0.21
PCDHA4-201ENST00000378125 MARC2Q969Z3 335 aa16.37■□□□□ 0.21
PCDHA4-201ENST00000378125 PLSCR2Q9NRY7 297 aa16.37■□□□□ 0.21
PCDHA4-201ENST00000378125 AMDHD2Q9Y303 409 aa16.37■□□□□ 0.21
PCDHA4-201ENST00000378125 UBE2J1Q9Y385 318 aaPredicted RBP16.37■□□□□ 0.21
PCDHA4-201ENST00000378125 ATP23Q9Y6H3 246 aa16.37■□□□□ 0.21
PCDHA4-201ENST00000378125 H7C1Q1 480 aa16.36■□□□□ 0.21
PCDHA4-201ENST00000378125 FAM157CP0CG43 387 aa16.36■□□□□ 0.21
PCDHA4-201ENST00000378125 MPV17P39210 176 aa16.36■□□□□ 0.21
PCDHA4-201ENST00000378125 SRSF3P84103 164 aaKnown RBP16.36■□□□□ 0.21
PCDHA4-201ENST00000378125 DEFA5Q01523 94 aa16.36■□□□□ 0.21
PCDHA4-201ENST00000378125 ALKBH2Q6NS38 261 aa16.36■□□□□ 0.21
PCDHA4-201ENST00000378125 Q6ZT83 130 aa16.36■□□□□ 0.21
PCDHA4-201ENST00000378125 ADAT1Q9BUB4 502 aaKnown RBP16.36■□□□□ 0.21
PCDHA4-201ENST00000378125 RTL8AQ9BWD3 113 aa16.36■□□□□ 0.21
PCDHA4-201ENST00000378125 AKAP13Q12802 2813 aa16.36■□□□□ 0.21
PCDHA4-201ENST00000378125 SLC33A1O00400 549 aaPredicted RBP16.36■□□□□ 0.21
PCDHA4-201ENST00000378125 NXPH3O95157 252 aa16.36■□□□□ 0.21
PCDHA4-201ENST00000378125 UCP2P55851 309 aa16.36■□□□□ 0.21
PCDHA4-201ENST00000378125 PSG7Q13046 419 aa16.36■□□□□ 0.21
PCDHA4-201ENST00000378125 C17orf50Q8WW18 174 aa16.36■□□□□ 0.21
PCDHA4-201ENST00000378125 USB1Q9BQ65 265 aaKnown RBP16.36■□□□□ 0.21
PCDHA4-201ENST00000378125 PARP12Q9H0J9 701 aaKnown RBP16.36■□□□□ 0.21
PCDHA4-201ENST00000378125 DNTTIP1Q9H147 329 aa16.36■□□□□ 0.21
PCDHA4-201ENST00000378125 TMEM231Q9H6L2 316 aa16.36■□□□□ 0.21
PCDHA4-201ENST00000378125 FBXO9Q9UK97 447 aaPredicted RBP16.36■□□□□ 0.21
PCDHA4-201ENST00000378125 RIF1Q5UIP0 2472 aaKnown RBP16.36■□□□□ 0.21
PCDHA4-201ENST00000378125 NKX2-6A6NCS4 301 aa16.35■□□□□ 0.21
PCDHA4-201ENST00000378125 J3QT63 122 aa16.35■□□□□ 0.21
PCDHA4-201ENST00000378125 CDK2AP1O14519 115 aa16.35■□□□□ 0.21
PCDHA4-201ENST00000378125 M6PRP20645 277 aa16.35■□□□□ 0.21
PCDHA4-201ENST00000378125 IGFL2Q6UWQ7 119 aa16.35■□□□□ 0.21
PCDHA4-201ENST00000378125 LDLRAD3Q86YD5 345 aa16.35■□□□□ 0.21
PCDHA4-201ENST00000378125 LRTM2Q8N967 370 aa16.35■□□□□ 0.21
PCDHA4-201ENST00000378125 KIRREL1Q96J84 757 aa16.35■□□□□ 0.21
PCDHA4-201ENST00000378125 TAAR6Q96RI8 345 aa16.35■□□□□ 0.21
PCDHA4-201ENST00000378125 HRH4Q9H3N8 390 aa16.35■□□□□ 0.21
PCDHA4-201ENST00000378125 PLK3Q9H4B4 646 aa16.35■□□□□ 0.21
PCDHA4-201ENST00000378125 TINAGQ9UJW2 476 aa16.35■□□□□ 0.21
PCDHA4-201ENST00000378125 KIR2DS1A0A191URI9 304 aa16.35■□□□□ 0.21
PCDHA4-201ENST00000378125 TSPAN4O14817 238 aa16.35■□□□□ 0.21
PCDHA4-201ENST00000378125 KIR2DS4P43632 304 aa16.35■□□□□ 0.21
PCDHA4-201ENST00000378125 KCNJ3P48549 501 aa16.35■□□□□ 0.21
PCDHA4-201ENST00000378125 CEBPDP49716 269 aaPredicted RBP16.35■□□□□ 0.21
PCDHA4-201ENST00000378125 ASCL1P50553 236 aa16.35■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 39.6 ms