RNA–Protein interactions for RNA: ENST00000337659.10

PRPF4B-201, Transcript of pre-mRNA processing factor 4B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PRPF4B, Length 4,415 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF4B-201ENST00000337659 IDO2Q6ZQW0 420 aa4.51□□□□□ -1.69
PRPF4B-201ENST00000337659 IZUMO1Q8IYV9 350 aa4.51□□□□□ -1.69
PRPF4B-201ENST00000337659 GRPEL2Q8TAA5 225 aa4.51□□□□□ -1.69
PRPF4B-201ENST00000337659 DDB2Q92466 427 aa4.51□□□□□ -1.69
PRPF4B-201ENST00000337659 VRK1Q99986 396 aaPredicted RBP4.51□□□□□ -1.69
PRPF4B-201ENST00000337659 CYTL1Q9NRR1 136 aa4.51□□□□□ -1.69
PRPF4B-201ENST00000337659 CADP27708 2225 aa4.51□□□□□ -1.69
PRPF4B-201ENST00000337659 KIR2DS1A0A191URI9 304 aa4.51□□□□□ -1.69
PRPF4B-201ENST00000337659 A0A1B0GW64 132 aa4.51□□□□□ -1.69
PRPF4B-201ENST00000337659 ARPC1BO15143 372 aaKnown RBP4.51□□□□□ -1.69
PRPF4B-201ENST00000337659 CDS2O95674 445 aa4.51□□□□□ -1.69
PRPF4B-201ENST00000337659 GAPDHP04406 335 aaKnown RBP4.51□□□□□ -1.69
PRPF4B-201ENST00000337659 CXCL2P19875 107 aa4.51□□□□□ -1.69
PRPF4B-201ENST00000337659 KIR2DS4P43632 304 aa4.51□□□□□ -1.69
PRPF4B-201ENST00000337659 OR3A1P47881 315 aa4.51□□□□□ -1.69
PRPF4B-201ENST00000337659 PRKXP51817 358 aa4.51□□□□□ -1.69
PRPF4B-201ENST00000337659 TAS2R30P59541 319 aa4.51□□□□□ -1.69
PRPF4B-201ENST00000337659 ZNF154Q13106 437 aa4.51□□□□□ -1.69
PRPF4B-201ENST00000337659 CBX3Q13185 183 aa4.51□□□□□ -1.69
PRPF4B-201ENST00000337659 KIR2DS1Q14954 304 aa4.51□□□□□ -1.69
PRPF4B-201ENST00000337659 C3AR1Q16581 482 aa4.51□□□□□ -1.69
PRPF4B-201ENST00000337659 C17orf107Q6ZR85 190 aa4.51□□□□□ -1.69
PRPF4B-201ENST00000337659 CENPVQ7Z7K6 275 aaPredicted RBP4.51□□□□□ -1.69
PRPF4B-201ENST00000337659 CD163Q86VB7 1156 aa4.51□□□□□ -1.69
PRPF4B-201ENST00000337659 JAGN1Q8N5M9 183 aa4.51□□□□□ -1.69
PRPF4B-201ENST00000337659 BEST4Q8NFU0 473 aa4.51□□□□□ -1.69
PRPF4B-201ENST00000337659 GINS4Q9BRT9 223 aa4.51□□□□□ -1.69
PRPF4B-201ENST00000337659 ZNF850A8MQ14 1090 aa4.5□□□□□ -1.69
PRPF4B-201ENST00000337659 RBFOX2O43251 390 aaKnown RBP eCLIP4.5□□□□□ -1.691e-12■■□□□ 13.4
PRPF4B-201ENST00000337659 OR8U8P0C7N1 319 aa4.5□□□□□ -1.69
PRPF4B-201ENST00000337659 SLC2A1P11166 492 aa4.5□□□□□ -1.69
PRPF4B-201ENST00000337659 VWC2Q2TAL6 325 aa4.5□□□□□ -1.69
PRPF4B-201ENST00000337659 ZFP69Q49AA0 526 aa4.5□□□□□ -1.69
PRPF4B-201ENST00000337659 ZNF585BQ52M93 769 aa4.5□□□□□ -1.69
PRPF4B-201ENST00000337659 RNASE10Q5GAN6 216 aaKnown RBP4.5□□□□□ -1.69
PRPF4B-201ENST00000337659 ZNF57Q68EA5 555 aaPredicted RBP4.5□□□□□ -1.69
PRPF4B-201ENST00000337659 TEX261Q6UWH6 196 aa4.5□□□□□ -1.69
PRPF4B-201ENST00000337659 ODF3L1Q8IXM7 274 aa4.5□□□□□ -1.69
PRPF4B-201ENST00000337659 ZNF295-AS1Q8N0V1 137 aa4.5□□□□□ -1.69
PRPF4B-201ENST00000337659 SLC25A40Q8TBP6 338 aa4.5□□□□□ -1.69
PRPF4B-201ENST00000337659 HS3ST6Q96QI5 342 aa4.5□□□□□ -1.69
PRPF4B-201ENST00000337659 REG4Q9BYZ8 158 aa4.5□□□□□ -1.69
PRPF4B-201ENST00000337659 U3KQ87 197 aa4.5□□□□□ -1.69
PRPF4B-201ENST00000337659 GEMIN2O14893 280 aaKnown RBP4.5□□□□□ -1.69
PRPF4B-201ENST00000337659 MPC2O95563 127 aa4.5□□□□□ -1.69
PRPF4B-201ENST00000337659 PTAFRP25105 342 aa4.5□□□□□ -1.69
PRPF4B-201ENST00000337659 NPBWR2P48146 333 aa4.5□□□□□ -1.69
PRPF4B-201ENST00000337659 TCF23Q7RTU1 214 aa4.5□□□□□ -1.69
PRPF4B-201ENST00000337659 DTX2Q86UW9 622 aa4.5□□□□□ -1.69
PRPF4B-201ENST00000337659 FAM58AQ8N1B3 248 aa4.5□□□□□ -1.69
PRPF4B-201ENST00000337659 ARL6IP6Q8N6S5 226 aa4.5□□□□□ -1.69
PRPF4B-201ENST00000337659 GVQW1Q8N7I0 195 aa4.5□□□□□ -1.69
PRPF4B-201ENST00000337659 SUMF2Q8NBJ7 301 aa4.5□□□□□ -1.69
PRPF4B-201ENST00000337659 GCDHQ92947 438 aaPredicted RBP4.5□□□□□ -1.69
PRPF4B-201ENST00000337659 CMBLQ96DG6 245 aa4.5□□□□□ -1.69
PRPF4B-201ENST00000337659 MED28Q9H204 178 aa4.5□□□□□ -1.69
PRPF4B-201ENST00000337659 FLVCR2Q9UPI3 526 aa4.5□□□□□ -1.69
PRPF4B-201ENST00000337659 POLR1DQ9Y2S0 133 aa4.5□□□□□ -1.69
PRPF4B-201ENST00000337659 MED13Q9UHV7 2174 aa4.5□□□□□ -1.69
PRPF4B-201ENST00000337659 SHANK1Q9Y566 2161 aa4.5□□□□□ -1.69
PRPF4B-201ENST00000337659 FAM90A26D6RGX4 464 aa4.5□□□□□ -1.69
PRPF4B-201ENST00000337659 FABP7O15540 132 aa4.5□□□□□ -1.69
PRPF4B-201ENST00000337659 SLC22A5O76082 557 aa4.5□□□□□ -1.69
PRPF4B-201ENST00000337659 SCAF4O95104 1147 aaKnown RBP4.5□□□□□ -1.69
PRPF4B-201ENST00000337659 LY86O95711 162 aa4.5□□□□□ -1.69
PRPF4B-201ENST00000337659 CYCSP99999 105 aaKnown RBP4.5□□□□□ -1.69
PRPF4B-201ENST00000337659 PPP1R1AQ13522 171 aa4.5□□□□□ -1.69
PRPF4B-201ENST00000337659 PLCXD3Q63HM9 321 aa4.5□□□□□ -1.69
PRPF4B-201ENST00000337659 FAM180AQ6UWF9 173 aa4.5□□□□□ -1.69
PRPF4B-201ENST00000337659 MRPL21Q7Z2W9 205 aaKnown RBP4.5□□□□□ -1.69
PRPF4B-201ENST00000337659 SELENOIQ9C0D9 397 aa4.5□□□□□ -1.69
PRPF4B-201ENST00000337659 NAA60Q9H7X0 242 aa4.5□□□□□ -1.69
PRPF4B-201ENST00000337659 RNF115Q9Y4L5 304 aa4.5□□□□□ -1.69
PRPF4B-201ENST00000337659 A0A0D9SG52 128 aa4.49□□□□□ -1.69
PRPF4B-201ENST00000337659 FCN3O75636 299 aa4.49□□□□□ -1.69
PRPF4B-201ENST00000337659 CRTAPO75718 401 aaPredicted RBP4.49□□□□□ -1.69
PRPF4B-201ENST00000337659 ANXA7P20073 488 aaKnown RBP4.49□□□□□ -1.69
PRPF4B-201ENST00000337659 SNU13P55769 128 aaKnown RBP4.49□□□□□ -1.69
PRPF4B-201ENST00000337659 LOXL3P58215 753 aa4.49□□□□□ -1.69
PRPF4B-201ENST00000337659 BAMBIQ13145 260 aa4.49□□□□□ -1.69
PRPF4B-201ENST00000337659 ANKRD55Q3KP44 614 aa4.49□□□□□ -1.69
PRPF4B-201ENST00000337659 PIGYQ3MUY2 71 aa4.49□□□□□ -1.69
PRPF4B-201ENST00000337659 C11orf87Q6NUJ2 197 aa4.49□□□□□ -1.69
PRPF4B-201ENST00000337659 PRSS54Q6PEW0 395 aa4.49□□□□□ -1.69
PRPF4B-201ENST00000337659 ZNF561Q8N587 486 aa4.49□□□□□ -1.69
PRPF4B-201ENST00000337659 C12orf45Q8N5I9 185 aaPredicted RBP4.49□□□□□ -1.69
PRPF4B-201ENST00000337659 ADAD2Q8NCV1 583 aaKnown RBP4.49□□□□□ -1.69
PRPF4B-201ENST00000337659 OR51F2Q8NH61 342 aa4.49□□□□□ -1.69
PRPF4B-201ENST00000337659 NUDCD2Q8WVJ2 157 aa4.49□□□□□ -1.69
PRPF4B-201ENST00000337659 COQ2Q96H96 371 aa4.49□□□□□ -1.69
PRPF4B-201ENST00000337659 MICU1Q9BPX6 476 aa4.49□□□□□ -1.69
PRPF4B-201ENST00000337659 AGMATQ9BSE5 352 aa4.49□□□□□ -1.69
PRPF4B-201ENST00000337659 DPCDQ9BVM2 203 aaPredicted RBP4.49□□□□□ -1.69
PRPF4B-201ENST00000337659 TMEM222Q9H0R3 208 aa4.49□□□□□ -1.69
PRPF4B-201ENST00000337659 ZNF286AQ9HBT8 521 aa4.49□□□□□ -1.69
PRPF4B-201ENST00000337659 ZNF581Q9P0T4 197 aa4.49□□□□□ -1.69
PRPF4B-201ENST00000337659 POU2F3Q9UKI9 436 aa4.49□□□□□ -1.69
PRPF4B-201ENST00000337659 ST3GAL6Q9Y274 331 aa4.49□□□□□ -1.69
PRPF4B-201ENST00000337659 ACACBO00763 2458 aa4.49□□□□□ -1.69
PRPF4B-201ENST00000337659 GCN1Q92616 2671 aaKnown RBP4.49□□□□□ -1.69
Retrieved 100 of 20,778 RNA–protein pairs in 46.4 ms