RNA–Protein interactions for RNA: ENST00000298281.8

PCF11-201, Transcript of PCF11, cleavage and polyadenylation factor subunit, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PCF11, Length 7,677 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCF11-201ENST00000298281 PDE6DO43924 150 aa10.74□□□□□ -0.69
PCF11-201ENST00000298281 ALX3O95076 343 aa10.74□□□□□ -0.69
PCF11-201ENST00000298281 ATF1P18846 271 aa10.74□□□□□ -0.69
PCF11-201ENST00000298281 UBE2L3P68036 154 aaKnown RBP10.74□□□□□ -0.69
PCF11-201ENST00000298281 BTG2P78543 158 aa10.74□□□□□ -0.69
PCF11-201ENST00000298281 IL11RAQ14626 422 aa10.74□□□□□ -0.69
PCF11-201ENST00000298281 TMEM215Q68D42 235 aa10.74□□□□□ -0.69
PCF11-201ENST00000298281 DUSP18Q8NEJ0 188 aa10.74□□□□□ -0.69
PCF11-201ENST00000298281 OR4B1Q8NGF8 309 aa10.74□□□□□ -0.69
PCF11-201ENST00000298281 FAM222BQ8WU58 562 aa10.74□□□□□ -0.69
PCF11-201ENST00000298281 A0A1B0GVG6 124 aa10.74□□□□□ -0.69
PCF11-201ENST00000298281 H0Y8X5 98 aa10.74□□□□□ -0.69
PCF11-201ENST00000298281 SLC2A10O95528 541 aa10.74□□□□□ -0.69
PCF11-201ENST00000298281 CLDN20P56880 219 aa10.74□□□□□ -0.69
PCF11-201ENST00000298281 UBE2DNLQ8IWF7 75 aa10.74□□□□□ -0.69
PCF11-201ENST00000298281 OR1L6Q8NGR2 347 aa10.74□□□□□ -0.69
PCF11-201ENST00000298281 PIK3IP1Q96FE7 263 aa10.74□□□□□ -0.69
PCF11-201ENST00000298281 FGF8P55075 233 aaPredicted RBP10.74□□□□□ -0.69
PCF11-201ENST00000298281 HES3Q5TGS1 186 aa10.74□□□□□ -0.69
PCF11-201ENST00000298281 OR10D4PQ8NGN7 298 aa10.74□□□□□ -0.69
PCF11-201ENST00000298281 MARCH1Q8TCQ1 289 aa10.74□□□□□ -0.69
PCF11-201ENST00000298281 ZMIZ1Q9ULJ6 1067 aa10.74□□□□□ -0.69
PCF11-201ENST00000298281 SLC17A2O00624 439 aa10.73□□□□□ -0.69
PCF11-201ENST00000298281 ZNF137PP52743 207 aa10.73□□□□□ -0.69
PCF11-201ENST00000298281 PDCD1Q15116 288 aa10.73□□□□□ -0.69
PCF11-201ENST00000298281 ALKBH3Q96Q83 286 aaPredicted RBP10.73□□□□□ -0.69
PCF11-201ENST00000298281 TEX101Q9BY14 249 aa10.73□□□□□ -0.69
PCF11-201ENST00000298281 CTNNBIP1Q9NSA3 81 aaPredicted RBP10.73□□□□□ -0.69
PCF11-201ENST00000298281 B9D1Q9UPM9 204 aa10.73□□□□□ -0.69
PCF11-201ENST00000298281 TRAV21A0A0B4J279 112 aa10.73□□□□□ -0.69
PCF11-201ENST00000298281 TMEM241Q24JQ0 296 aa10.73□□□□□ -0.69
PCF11-201ENST00000298281 MDP1Q86V88 176 aa10.73□□□□□ -0.69
PCF11-201ENST00000298281 CYB5R1Q9UHQ9 305 aa10.73□□□□□ -0.69
PCF11-201ENST00000298281 PDCD11Q14690 1871 aaKnown RBP10.73□□□□□ -0.69
PCF11-201ENST00000298281 ZNF688P0C7X2 276 aa10.73□□□□□ -0.69
PCF11-201ENST00000298281 PTGFRP43088 359 aa10.73□□□□□ -0.69
PCF11-201ENST00000298281 MIDNQ504T8 468 aa10.73□□□□□ -0.69
PCF11-201ENST00000298281 GBGT1Q8N5D6 347 aa10.73□□□□□ -0.69
PCF11-201ENST00000298281 OR1F12Q8NHA8 337 aa10.73□□□□□ -0.69
PCF11-201ENST00000298281 NUDCD2Q8WVJ2 157 aa10.73□□□□□ -0.69
PCF11-201ENST00000298281 MED29Q9NX70 200 aa10.73□□□□□ -0.69
PCF11-201ENST00000298281 A4GNTQ9UNA3 340 aa10.73□□□□□ -0.69
PCF11-201ENST00000298281 GPX5O75715 221 aa10.73□□□□□ -0.69
PCF11-201ENST00000298281 STAG3L3P0CL85 134 aa10.73□□□□□ -0.69
PCF11-201ENST00000298281 HLA-BQ31612 363 aa10.73□□□□□ -0.69
PCF11-201ENST00000298281 SAP30LQ9HAJ7 183 aa10.73□□□□□ -0.69
PCF11-201ENST00000298281 ZDBF2Q9HCK1 2354 aa10.73□□□□□ -0.69
PCF11-201ENST00000298281 TRBV5-4A0A0C4DH59 114 aa10.73□□□□□ -0.69
PCF11-201ENST00000298281 GP1BAP07359 652 aa10.73□□□□□ -0.69
PCF11-201ENST00000298281 SSX8Q7RTT4 187 aa10.73□□□□□ -0.69
PCF11-201ENST00000298281 NXT2Q9NPJ8 142 aaKnown RBP10.73□□□□□ -0.69
PCF11-201ENST00000298281 CYSLTR2Q9NS75 346 aa10.73□□□□□ -0.69
PCF11-201ENST00000298281 TMED3Q9Y3Q3 217 aa10.73□□□□□ -0.69
PCF11-201ENST00000298281 CACNA1IQ9P0X4 2223 aa10.73□□□□□ -0.69
PCF11-201ENST00000298281 B4E171 279 aa10.73□□□□□ -0.69
PCF11-201ENST00000298281 RBFOX2O43251 390 aaKnown RBP eCLIP10.73□□□□□ -0.69
PCF11-201ENST00000298281 MAS1LP35410 378 aa10.73□□□□□ -0.69
PCF11-201ENST00000298281 MDH2P40926 338 aaKnown RBP10.73□□□□□ -0.69
PCF11-201ENST00000298281 FUT7Q11130 342 aa10.73□□□□□ -0.69
PCF11-201ENST00000298281 TMEM95Q3KNT9 176 aa10.73□□□□□ -0.69
PCF11-201ENST00000298281 OLIG3Q7RTU3 272 aa10.73□□□□□ -0.69
PCF11-201ENST00000298281 SMIM4Q8WVI0 70 aa10.73□□□□□ -0.69
PCF11-201ENST00000298281 A0A087WUJ7 227 aa10.73□□□□□ -0.69
PCF11-201ENST00000298281 IGHV3-21A0A0B4J1V1 117 aa10.73□□□□□ -0.69
PCF11-201ENST00000298281 A0A1B0GU03 582 aa10.73□□□□□ -0.69
PCF11-201ENST00000298281 GALP22466 123 aa10.73□□□□□ -0.69
PCF11-201ENST00000298281 CDC20Q12834 499 aa10.73□□□□□ -0.69
PCF11-201ENST00000298281 C21orf62-AS1Q17RA5 79 aa10.73□□□□□ -0.69
PCF11-201ENST00000298281 UQCC3Q6UW78 93 aa10.73□□□□□ -0.69
PCF11-201ENST00000298281 ASCL5Q7RTU5 278 aa10.73□□□□□ -0.69
PCF11-201ENST00000298281 NTNG2Q96CW9 530 aa10.73□□□□□ -0.69
PCF11-201ENST00000298281 KLK11Q9UBX7 282 aa10.73□□□□□ -0.69
PCF11-201ENST00000298281 TBL2Q9Y4P3 447 aaKnown RBP10.73□□□□□ -0.69
PCF11-201ENST00000298281 CD3DP04234 171 aa10.72□□□□□ -0.69
PCF11-201ENST00000298281 SBK3P0C264 359 aa10.72□□□□□ -0.69
PCF11-201ENST00000298281 CCL7P80098 99 aa10.72□□□□□ -0.69
PCF11-201ENST00000298281 HYAL1Q12794 435 aa10.72□□□□□ -0.69
PCF11-201ENST00000298281 ZG16BQ96DA0 208 aa10.72□□□□□ -0.69
PCF11-201ENST00000298281 STARD4Q96DR4 205 aa10.72□□□□□ -0.69
PCF11-201ENST00000298281 CA10Q9NS85 328 aa10.72□□□□□ -0.69
PCF11-201ENST00000298281 ECM29Q5VYK3 1845 aa10.72□□□□□ -0.69
PCF11-201ENST00000298281 LOC101059915A0A1B0GWI6 518 aaPredicted RBP10.72□□□□□ -0.69
PCF11-201ENST00000298281 IGLV3-25P01717 112 aa10.72□□□□□ -0.69
PCF11-201ENST00000298281 EGR1P18146 543 aa10.72□□□□□ -0.69
PCF11-201ENST00000298281 RPL34P49207 117 aaKnown RBP10.72□□□□□ -0.69
PCF11-201ENST00000298281 MRPL58Q14197 206 aaKnown RBP10.72□□□□□ -0.69
PCF11-201ENST00000298281 CENPVQ7Z7K6 275 aaPredicted RBP10.72□□□□□ -0.69
PCF11-201ENST00000298281 SPTBN1Q01082 2364 aaKnown RBP10.72□□□□□ -0.69
PCF11-201ENST00000298281 DLX6P56179 175 aa10.72□□□□□ -0.69
PCF11-201ENST00000298281 CEACAM16Q2WEN9 425 aa10.72□□□□□ -0.69
PCF11-201ENST00000298281 FAHD1Q6P587 224 aa10.72□□□□□ -0.69
PCF11-201ENST00000298281 RGP1Q92546 391 aaPredicted RBP10.72□□□□□ -0.69
PCF11-201ENST00000298281 FOXB1Q99853 325 aa10.72□□□□□ -0.69
PCF11-201ENST00000298281 ELOVL1Q9BW60 279 aa10.72□□□□□ -0.69
PCF11-201ENST00000298281 WNT9BO14905 357 aa10.72□□□□□ -0.69
PCF11-201ENST00000298281 FCMRO60667 390 aa10.72□□□□□ -0.69
PCF11-201ENST00000298281 PLP1P60201 277 aa10.72□□□□□ -0.69
PCF11-201ENST00000298281 FAM78BQ5VT40 261 aa10.72□□□□□ -0.69
PCF11-201ENST00000298281 DEGS2Q6QHC5 323 aa10.72□□□□□ -0.69
PCF11-201ENST00000298281 ZDHHC22Q8N966 263 aa10.72□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 68.7 ms