RNA–Protein interactions for RNA: ENST00000639850.1

ME2-216, Transcript of malic enzyme 2, human

TSL 5 BASIC

Gene ME2, Length 2,331 nt, Biotype protein coding, Subcellular localisation Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
ME2-216	ENST00000639850	HSPA1L	P34931	641 aa		24.33	■■□□□ 1.48
ME2-216	ENST00000639850	TAF1	P21675	1872 aa		24.32	■■□□□ 1.48
ME2-216	ENST00000639850	TAF1L	Q8IZX4	1826 aa		24.32	■■□□□ 1.48
ME2-216	ENST00000639850	RASGRF1	Q13972	1273 aa		24.32	■■□□□ 1.48
ME2-216	ENST00000639850	C3orf67	Q6ZVT6	689 aa		24.32	■■□□□ 1.48
ME2-216	ENST00000639850	ANKRD18A	Q8IVF6	992 aa		24.32	■■□□□ 1.48
ME2-216	ENST00000639850	GDPD2	Q9HCC8	539 aa		24.32	■■□□□ 1.48
ME2-216	ENST00000639850	SRP68	Q9UHB9	627 aa	Known RBP	24.32	■■□□□ 1.48
ME2-216	ENST00000639850	RTCB	Q9Y3I0	505 aa	Known RBP	24.32	■■□□□ 1.48
ME2-216	ENST00000639850	LY75	O60449	1722 aa		24.32	■■□□□ 1.48
ME2-216	ENST00000639850	ATRN	O75882	1429 aa		24.32	■■□□□ 1.48
ME2-216	ENST00000639850	ZNF532	Q9HCE3	1301 aa		24.32	■■□□□ 1.48
ME2-216	ENST00000639850	PDE6A	P16499	860 aa		24.32	■■□□□ 1.48
ME2-216	ENST00000639850	USP48	Q86UV5	1035 aa		24.32	■■□□□ 1.48
ME2-216	ENST00000639850	SETDB2	Q96T68	719 aa		24.32	■■□□□ 1.48
ME2-216	ENST00000639850	COL4A1	P02462	1669 aa		24.31	■■□□□ 1.48
ME2-216	ENST00000639850	HAND2	P61296	217 aa		24.31	■■□□□ 1.48
ME2-216	ENST00000639850	ZSCAN23	Q3MJ62	389 aa		24.31	■■□□□ 1.48
ME2-216	ENST00000639850	NYX	Q9GZU5	481 aa		24.31	■■□□□ 1.48
ME2-216	ENST00000639850	DOCK2	Q92608	1830 aa		24.31	■■□□□ 1.48
ME2-216	ENST00000639850	SLC10A5	Q5PT55	438 aa		24.3	■■□□□ 1.48
ME2-216	ENST00000639850	WWC3	Q9ULE0	1092 aa		24.3	■■□□□ 1.48
ME2-216	ENST00000639850	NSFL1C	Q9UNZ2	370 aa	Known RBP	24.3	■■□□□ 1.48
ME2-216	ENST00000639850	BCAM	P50895	628 aa		24.3	■■□□□ 1.48
ME2-216	ENST00000639850	AGXT2	Q9BYV1	514 aa		24.3	■■□□□ 1.48
ME2-216	ENST00000639850	CNPY2	Q9Y2B0	182 aa		24.3	■■□□□ 1.48
ME2-216	ENST00000639850	RBM27	Q9P2N5	1060 aa	Known RBP	24.29	■■□□□ 1.48
ME2-216	ENST00000639850	MAP3K12	Q12852	859 aa		24.29	■■□□□ 1.48
ME2-216	ENST00000639850	TCRBV5S4A2T	A0A5A2	114 aa		24.28	■■□□□ 1.48
ME2-216	ENST00000639850	ZNF213	O14771	459 aa		24.28	■■□□□ 1.48
ME2-216	ENST00000639850	ONECUT3	O60422	494 aa	Predicted RBP	24.28	■■□□□ 1.48
ME2-216	ENST00000639850	ZNF445	P59923	1031 aa		24.28	■■□□□ 1.48
ME2-216	ENST00000639850	APOBR	Q0VD83	1088 aa		24.28	■■□□□ 1.48
ME2-216	ENST00000639850	NBPF5P	Q86XG9	351 aa	Predicted RBP	24.28	■■□□□ 1.48
ME2-216	ENST00000639850	TMEM87A	Q8NBN3	555 aa		24.28	■■□□□ 1.48
ME2-216	ENST00000639850	TRPC5	Q9UL62	973 aa	Predicted RBP	24.28	■■□□□ 1.48
ME2-216	ENST00000639850	PFKFB2	O60825	505 aa		24.28	■■□□□ 1.48
ME2-216	ENST00000639850	CHST3	Q7LGC8	479 aa		24.28	■■□□□ 1.48
ME2-216	ENST00000639850	BSDC1	Q9NW68	430 aa	Predicted RBP	24.28	■■□□□ 1.48
ME2-216	ENST00000639850		A0A1B0GUL6	1792 aa		24.28	■■□□□ 1.48
ME2-216	ENST00000639850	SCRN1	Q12765	414 aa		24.27	■■□□□ 1.48
ME2-216	ENST00000639850	SEPT12	Q8IYM1	358 aa		24.27	■■□□□ 1.48
ME2-216	ENST00000639850	ARHGEF1	Q92888	912 aa	Known RBP	24.27	■■□□□ 1.48
ME2-216	ENST00000639850	COL24A1	Q17RW2	1714 aa		24.27	■■□□□ 1.48
ME2-216	ENST00000639850	TMEM63C	Q9P1W3	806 aa		24.27	■■□□□ 1.48
ME2-216	ENST00000639850	GADD45B	O75293	160 aa	Predicted RBP	24.26	■■□□□ 1.47
ME2-216	ENST00000639850	APP	P05067	770 aa		24.26	■■□□□ 1.47
ME2-216	ENST00000639850	MAGEB6	Q8N7X4	407 aa		24.26	■■□□□ 1.47
ME2-216	ENST00000639850	AIDA	Q96BJ3	306 aa		24.26	■■□□□ 1.47
ME2-216	ENST00000639850	JAK2	O60674	1132 aa		24.26	■■□□□ 1.47
ME2-216	ENST00000639850	CDC37L1	Q7L3B6	337 aa		24.26	■■□□□ 1.47
ME2-216	ENST00000639850	AMIGO3	Q86WK7	504 aa		24.26	■■□□□ 1.47
ME2-216	ENST00000639850	NLRP3	Q96P20	1036 aa		24.26	■■□□□ 1.47
ME2-216	ENST00000639850	PANK2	Q9BZ23	570 aa		24.26	■■□□□ 1.47
ME2-216	ENST00000639850	TPTE2	Q6XPS3	522 aa		24.25	■■□□□ 1.47
ME2-216	ENST00000639850	LLPH	Q9BRT6	129 aa	Known RBP	24.25	■■□□□ 1.47
ME2-216	ENST00000639850	C4B	P0C0L5	1744 aa		24.25	■■□□□ 1.47
ME2-216	ENST00000639850	DNM1	Q05193	864 aa	Known RBP	24.24	■■□□□ 1.47
ME2-216	ENST00000639850	FBXL16	Q8N461	479 aa		24.24	■■□□□ 1.47
ME2-216	ENST00000639850	NCOA7	Q8NI08	942 aa		24.24	■■□□□ 1.47
ME2-216	ENST00000639850	UBE4A	Q14139	1066 aa		24.24	■■□□□ 1.47
ME2-216	ENST00000639850	CELF1	Q92879	486 aa	Known RBP	24.24	■■□□□ 1.47
ME2-216	ENST00000639850	STRBP	Q96SI9	672 aa	Known RBP	24.24	■■□□□ 1.47
ME2-216	ENST00000639850	NAP1L2	Q9ULW6	460 aa	Predicted RBP	24.24	■■□□□ 1.47
ME2-216	ENST00000639850	MINPP1	Q9UNW1	487 aa		24.24	■■□□□ 1.47
ME2-216	ENST00000639850	FIBP	O43427	364 aa		24.23	■■□□□ 1.47
ME2-216	ENST00000639850	MCM5	P33992	734 aa		24.23	■■□□□ 1.47
ME2-216	ENST00000639850	RALYL	Q86SE5	291 aa	Known RBP	24.23	■■□□□ 1.47
ME2-216	ENST00000639850	ZNF274	Q96GC6	653 aa	Predicted RBP	24.23	■■□□□ 1.47
ME2-216	ENST00000639850	RFC4	P35249	363 aa		24.23	■■□□□ 1.47
ME2-216	ENST00000639850	CSPP1	Q1MSJ5	1256 aa		24.23	■■□□□ 1.47
ME2-216	ENST00000639850	C4A	P0C0L4	1744 aa		24.22	■■□□□ 1.47
ME2-216	ENST00000639850	TRAPPC3L	Q5T215	181 aa		24.22	■■□□□ 1.47
ME2-216	ENST00000639850	FERMT3	Q86UX7	667 aa		24.22	■■□□□ 1.47
ME2-216	ENST00000639850	MB21D2	Q8IYB1	491 aa	Predicted RBP	24.22	■■□□□ 1.47
ME2-216	ENST00000639850	PRC1	O43663	620 aa		24.22	■■□□□ 1.47
ME2-216	ENST00000639850	PHF14	O94880	888 aa		24.22	■■□□□ 1.47
ME2-216	ENST00000639850	SMARCC2	Q8TAQ2	1214 aa		24.22	■■□□□ 1.47
ME2-216	ENST00000639850	SYAP1	Q96A49	352 aa	Predicted RBP	24.22	■■□□□ 1.47
ME2-216	ENST00000639850	DDX11	Q96FC9	970 aa		24.22	■■□□□ 1.47
ME2-216	ENST00000639850	BCL11B	Q9C0K0	894 aa	Predicted RBP	24.22	■■□□□ 1.47
ME2-216	ENST00000639850	GNL3L	Q9NVN8	582 aa	Known RBP	24.22	■■□□□ 1.47
ME2-216	ENST00000639850	PDIA3	P30101	505 aa	Known RBP	24.21	■■□□□ 1.47
ME2-216	ENST00000639850	CCT2	P78371	535 aa	Known RBP	24.21	■■□□□ 1.47
ME2-216	ENST00000639850	FAM184A	Q8NB25	1140 aa		24.21	■■□□□ 1.47
ME2-216	ENST00000639850	LRP2BP	Q9P2M1	347 aa		24.21	■■□□□ 1.47
ME2-216	ENST00000639850	IQSEC3	Q9UPP2	1182 aa	Predicted RBP	24.21	■■□□□ 1.47
ME2-216	ENST00000639850	GYG1	P46976	350 aa		24.21	■■□□□ 1.47
ME2-216	ENST00000639850	RPS8	P62241	208 aa	Known RBP	24.21	■■□□□ 1.47
ME2-216	ENST00000639850	TRDN	Q13061	729 aa		24.21	■■□□□ 1.47
ME2-216	ENST00000639850	ZNF804B	A4D1E1	1349 aa		24.21	■■□□□ 1.47
ME2-216	ENST00000639850	MBD4	O95243	580 aa		24.2	■■□□□ 1.46
ME2-216	ENST00000639850	UBE2H	P62256	183 aa		24.2	■■□□□ 1.46
ME2-216	ENST00000639850	FAM196A	Q6ZSG2	479 aa		24.2	■■□□□ 1.46
ME2-216	ENST00000639850	CCDC24	Q8N4L8	307 aa		24.2	■■□□□ 1.46
ME2-216	ENST00000639850	NSUN7	Q8NE18	718 aa	Known RBP	24.2	■■□□□ 1.46
ME2-216	ENST00000639850	CHMP4C	Q96CF2	233 aa		24.2	■■□□□ 1.46
ME2-216	ENST00000639850	EVC	P57679	992 aa		24.19	■■□□□ 1.46
ME2-216	ENST00000639850	CAVIN4	Q5BKX8	364 aa		24.19	■■□□□ 1.46
ME2-216	ENST00000639850	NBPF3	Q9H094	633 aa		24.19	■■□□□ 1.46

Retrieved 100 of 20,778 RNA–protein pairs in 42.1 ms