RNA–Protein interactions for RNA: ENST00000612930.1

TSKU-205, Transcript of tsukushi, small leucine rich proteoglycan, humanhuman

APPRIS P1 TSL 4 BASIC

Gene TSKU, Length 2,666 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSKU-205ENST00000612930 PROSER3Q2NL68 480 aa19.18■□□□□ 0.66
TSKU-205ENST00000612930 DHX32Q7L7V1 743 aaKnown RBP19.18■□□□□ 0.66
TSKU-205ENST00000612930 LTV1Q96GA3 475 aaPredicted RBP19.18■□□□□ 0.66
TSKU-205ENST00000612930 ZFP91Q96JP5 570 aaPredicted RBP19.18■□□□□ 0.66
TSKU-205ENST00000612930 RRP15Q9Y3B9 282 aaKnown RBP19.18■□□□□ 0.66
TSKU-205ENST00000612930 DHX16O60231 1041 aaKnown RBP19.17■□□□□ 0.66
TSKU-205ENST00000612930 ZNF202O95125 648 aa19.17■□□□□ 0.66
TSKU-205ENST00000612930 UBASH3AP57075 661 aa19.17■□□□□ 0.66
TSKU-205ENST00000612930 FCHSD1Q86WN1 690 aa19.17■□□□□ 0.66
TSKU-205ENST00000612930 USHBP1Q8N6Y0 703 aa19.17■□□□□ 0.66
TSKU-205ENST00000612930 IQUBQ8NA54 791 aa19.17■□□□□ 0.66
TSKU-205ENST00000612930 MED1Q15648 1581 aaPredicted RBP19.17■□□□□ 0.66
TSKU-205ENST00000612930 ZSCAN12O43309 604 aa19.17■□□□□ 0.66
TSKU-205ENST00000612930 KSR2Q6VAB6 950 aa19.17■□□□□ 0.66
TSKU-205ENST00000612930 TMEM232C9JQI7 657 aa19.16■□□□□ 0.66
TSKU-205ENST00000612930 GRM8O00222 908 aa19.16■□□□□ 0.66
TSKU-205ENST00000612930 FDPSP14324 419 aaKnown RBP19.16■□□□□ 0.66
TSKU-205ENST00000612930 IRX3P78415 501 aaPredicted RBP19.16■□□□□ 0.66
TSKU-205ENST00000612930 STK38Q15208 465 aa19.16■□□□□ 0.66
TSKU-205ENST00000612930 AGXT2Q9BYV1 514 aa19.16■□□□□ 0.66
TSKU-205ENST00000612930 CARMIL3Q8ND23 1372 aa19.16■□□□□ 0.66
TSKU-205ENST00000612930 ACTN2P35609 894 aa19.16■□□□□ 0.66
TSKU-205ENST00000612930 EXOSC10Q01780 885 aaKnown RBP19.16■□□□□ 0.66
TSKU-205ENST00000612930 LONRF2Q1L5Z9 754 aa19.16■□□□□ 0.66
TSKU-205ENST00000612930 VSTM4Q8IW00 320 aa19.16■□□□□ 0.66
TSKU-205ENST00000612930 RABGGTAQ92696 567 aa19.16■□□□□ 0.66
TSKU-205ENST00000612930 ZBTB9Q96C00 473 aa19.16■□□□□ 0.66
TSKU-205ENST00000612930 DBF4Q9UBU7 674 aaPredicted RBP19.16■□□□□ 0.66
TSKU-205ENST00000612930 HDAC5Q9UQL6 1122 aa19.16■□□□□ 0.66
TSKU-205ENST00000612930 MAP2K7O14733 419 aa19.15■□□□□ 0.66
TSKU-205ENST00000612930 GNG11P61952 73 aa19.15■□□□□ 0.66
TSKU-205ENST00000612930 SF3A1Q15459 793 aaKnown RBP19.15■□□□□ 0.66
TSKU-205ENST00000612930 OTUD7BQ6GQQ9 843 aa19.15■□□□□ 0.66
TSKU-205ENST00000612930 KIFC2Q96AC6 838 aa19.15■□□□□ 0.66
TSKU-205ENST00000612930 PIK3C2AO00443 1686 aa19.14■□□□□ 0.65
TSKU-205ENST00000612930 SERPINC1P01008 464 aa19.14■□□□□ 0.65
TSKU-205ENST00000612930 MCMDC2Q4G0Z9 681 aa19.14■□□□□ 0.65
TSKU-205ENST00000612930 UTYO14607 1347 aa19.14■□□□□ 0.65
TSKU-205ENST00000612930 MRC1P22897 1456 aa19.14■□□□□ 0.65
TSKU-205ENST00000612930 SPTLC2O15270 562 aa19.14■□□□□ 0.65
TSKU-205ENST00000612930 ARHGAP6O43182 974 aa19.14■□□□□ 0.65
TSKU-205ENST00000612930 HMGB1P09429 215 aaKnown RBP19.14■□□□□ 0.65
TSKU-205ENST00000612930 ATP5JP18859 108 aa19.14■□□□□ 0.65
TSKU-205ENST00000612930 PDIA3P30101 505 aaKnown RBP19.14■□□□□ 0.65
TSKU-205ENST00000612930 CFAP100Q494V2 611 aa19.14■□□□□ 0.65
TSKU-205ENST00000612930 KCNG4Q8TDN1 519 aa19.14■□□□□ 0.65
TSKU-205ENST00000612930 POLR3DP05423 398 aaPredicted RBP19.13■□□□□ 0.65
TSKU-205ENST00000612930 DBNLQ9UJU6 430 aaKnown RBP19.13■□□□□ 0.65
TSKU-205ENST00000612930 CBFA2T2O43439 604 aa19.13■□□□□ 0.65
TSKU-205ENST00000612930 YEATS4O95619 227 aa19.13■□□□□ 0.65
TSKU-205ENST00000612930 TOP1P11387 765 aaKnown RBP19.13■□□□□ 0.65
TSKU-205ENST00000612930 AXDND1Q5T1B0 1012 aaPredicted RBP19.13■□□□□ 0.65
TSKU-205ENST00000612930 DHX58Q96C10 678 aa19.13■□□□□ 0.65
TSKU-205ENST00000612930 A0A0G2JLW4 131 aa19.12■□□□□ 0.65
TSKU-205ENST00000612930 PFKFB1P16118 471 aa19.12■□□□□ 0.65
TSKU-205ENST00000612930 TXLNAP40222 546 aa19.12■□□□□ 0.65
TSKU-205ENST00000612930 TEFQ10587 303 aa19.12■□□□□ 0.65
TSKU-205ENST00000612930 GOLGA1Q92805 767 aa19.12■□□□□ 0.65
TSKU-205ENST00000612930 INTS13Q9NVM9 706 aa19.12■□□□□ 0.65
TSKU-205ENST00000612930 POLR3EQ9NVU0 708 aa19.12■□□□□ 0.65
TSKU-205ENST00000612930 PLEKHG2Q9H7P9 1386 aa19.12■□□□□ 0.65
TSKU-205ENST00000612930 CCDC151A5D8V7 595 aa19.12■□□□□ 0.65
TSKU-205ENST00000612930 LINS1Q8NG48 757 aa19.12■□□□□ 0.65
TSKU-205ENST00000612930 MYL5Q02045 173 aa19.11■□□□□ 0.65
TSKU-205ENST00000612930 TOGARAM2Q6ZUX3 1019 aa19.11■□□□□ 0.65
TSKU-205ENST00000612930 TUBE1Q9UJT0 475 aa19.11■□□□□ 0.65
TSKU-205ENST00000612930 MROH7-TTC4A0A0A0MT08 1334 aa19.11■□□□□ 0.65
TSKU-205ENST00000612930 BTBD11A6QL63 1104 aa19.1■□□□□ 0.65
TSKU-205ENST00000612930 NLRP6P59044 892 aa19.1■□□□□ 0.65
TSKU-205ENST00000612930 CHST3Q7LGC8 479 aa19.1■□□□□ 0.65
TSKU-205ENST00000612930 ZNF274Q96GC6 653 aaPredicted RBP19.1■□□□□ 0.65
TSKU-205ENST00000612930 PDE11AQ9HCR9 933 aa19.1■□□□□ 0.65
TSKU-205ENST00000612930 BRD3Q15059 726 aa19.1■□□□□ 0.65
TSKU-205ENST00000612930 MYSM1Q5VVJ2 828 aa19.1■□□□□ 0.65
TSKU-205ENST00000612930 JAKMIP3Q5VZ66 844 aa19.1■□□□□ 0.65
TSKU-205ENST00000612930 FOXR1Q6PIV2 292 aa19.1■□□□□ 0.65
TSKU-205ENST00000612930 BAG1Q99933 345 aaPredicted RBP19.1■□□□□ 0.65
TSKU-205ENST00000612930 VPS18Q9P253 973 aa19.1■□□□□ 0.65
TSKU-205ENST00000612930 RFX7Q2KHR2 1363 aa19.1■□□□□ 0.65
TSKU-205ENST00000612930 GOLGA6L9A6NEM1 432 aa19.09■□□□□ 0.65
TSKU-205ENST00000612930 CMA1P23946 247 aa19.09■□□□□ 0.65
TSKU-205ENST00000612930 TBX2Q13207 712 aaPredicted RBP19.09■□□□□ 0.65
TSKU-205ENST00000612930 NBPF6Q5VWK0 638 aa19.09■□□□□ 0.65
TSKU-205ENST00000612930 NBPF4Q96M43 638 aa19.09■□□□□ 0.65
TSKU-205ENST00000612930 TSPOAP1O95153 1857 aa19.09■□□□□ 0.65
TSKU-205ENST00000612930 PRAMEF22A3QJZ6 481 aa19.09■□□□□ 0.65
TSKU-205ENST00000612930 WDHD1O75717 1129 aaPredicted RBP19.09■□□□□ 0.65
TSKU-205ENST00000612930 NGDNQ8NEJ9 315 aaKnown RBP19.09■□□□□ 0.65
TSKU-205ENST00000612930 FANCLQ9NW38 375 aa19.09■□□□□ 0.65
TSKU-205ENST00000612930 TAF7LQ5H9L4 462 aa19.08■□□□□ 0.65
TSKU-205ENST00000612930 EPHA10Q5JZY3 1008 aa19.08■□□□□ 0.65
TSKU-205ENST00000612930 BEND6Q5SZJ8 279 aaPredicted RBP19.08■□□□□ 0.65
TSKU-205ENST00000612930 DDX46Q7L014 1031 aaKnown RBP19.08■□□□□ 0.65
TSKU-205ENST00000612930 SLIT1O75093 1534 aa19.08■□□□□ 0.64
TSKU-205ENST00000612930 E7EWF7 191 aa19.08■□□□□ 0.64
TSKU-205ENST00000612930 TNNI3KQ59H18 835 aa19.08■□□□□ 0.64
TSKU-205ENST00000612930 CTR9Q6PD62 1173 aa19.08■□□□□ 0.64
TSKU-205ENST00000612930 LEKR1Q6ZMV7 388 aa19.08■□□□□ 0.64
TSKU-205ENST00000612930 ZSWIM4Q9H7M6 989 aa19.08■□□□□ 0.64
TSKU-205ENST00000612930 ANKZF1Q9H8Y5 726 aa19.08■□□□□ 0.64
Retrieved 100 of 20,778 RNA–protein pairs in 33.4 ms