RNA–Protein interactions for RNA: ENST00000600442.5

ZNF548-210, Transcript of zinc finger protein 548, humanhuman

TSL 4

Gene ZNF548, Length 535 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF548-210ENST00000600442 SGSM2O43147 1006 aa15.35■□□□□ 0.05
ZNF548-210ENST00000600442 ARID4AP29374 1257 aaPredicted RBP15.35■□□□□ 0.05
ZNF548-210ENST00000600442 WASHC4Q2M389 1173 aa15.35■□□□□ 0.05
ZNF548-210ENST00000600442 ZNF622Q969S3 477 aaKnown RBP eCLIP15.35■□□□□ 0.05
ZNF548-210ENST00000600442 ZNF219Q9P2Y4 722 aaPredicted RBP15.35■□□□□ 0.05
ZNF548-210ENST00000600442 ZNF804BA4D1E1 1349 aa15.35■□□□□ 0.05
ZNF548-210ENST00000600442 C21orf2O43822 256 aa15.34■□□□□ 0.05
ZNF548-210ENST00000600442 IGSF3O75054 1194 aa15.34■□□□□ 0.05
ZNF548-210ENST00000600442 ATP2B4P23634 1241 aa15.34■□□□□ 0.05
ZNF548-210ENST00000600442 MAP3K12Q12852 859 aa15.34■□□□□ 0.05
ZNF548-210ENST00000600442 TMED8Q6PL24 325 aaPredicted RBP15.34■□□□□ 0.05
ZNF548-210ENST00000600442 SPATA5Q8NB90 893 aa15.34■□□□□ 0.05
ZNF548-210ENST00000600442 USP26Q9BXU7 913 aa15.34■□□□□ 0.05
ZNF548-210ENST00000600442 HELLSQ9NRZ9 838 aa15.34■□□□□ 0.05
ZNF548-210ENST00000600442 DENND2AQ9ULE3 1009 aa15.34■□□□□ 0.05
ZNF548-210ENST00000600442 COL11A2P13942 1736 aaPredicted RBP15.34■□□□□ 0.05
ZNF548-210ENST00000600442 SLX4Q8IY92 1834 aa15.33■□□□□ 0.05
ZNF548-210ENST00000600442 PPEF1O14829 653 aaPredicted RBP15.33■□□□□ 0.04
ZNF548-210ENST00000600442 RNF113AO15541 343 aaKnown RBP15.33■□□□□ 0.04
ZNF548-210ENST00000600442 SRGNP10124 158 aa15.33■□□□□ 0.04
ZNF548-210ENST00000600442 HIBADHP31937 336 aaKnown RBP15.33■□□□□ 0.04
ZNF548-210ENST00000600442 ANAPC15P60006 121 aa15.33■□□□□ 0.04
ZNF548-210ENST00000600442 MCMDC2Q4G0Z9 681 aa15.33■□□□□ 0.04
ZNF548-210ENST00000600442 RNF20Q5VTR2 975 aa15.33■□□□□ 0.04
ZNF548-210ENST00000600442 STYK1Q6J9G0 422 aa15.33■□□□□ 0.04
ZNF548-210ENST00000600442 SP8Q8IXZ3 490 aa15.33■□□□□ 0.04
ZNF548-210ENST00000600442 CNKSR1Q969H4 720 aa15.33■□□□□ 0.04
ZNF548-210ENST00000600442 GGA1Q9UJY5 639 aa15.33■□□□□ 0.04
ZNF548-210ENST00000600442 PHKA1P46020 1223 aa15.32■□□□□ 0.04
ZNF548-210ENST00000600442 GRIPAP1Q4V328 841 aa15.32■□□□□ 0.04
ZNF548-210ENST00000600442 ZNF804AQ7Z570 1209 aa15.32■□□□□ 0.04
ZNF548-210ENST00000600442 ZKSCAN1P17029 563 aaPredicted RBP15.31■□□□□ 0.04
ZNF548-210ENST00000600442 ZAP70P43403 619 aa15.31■□□□□ 0.04
ZNF548-210ENST00000600442 NMIQ13287 307 aaPredicted RBP15.31■□□□□ 0.04
ZNF548-210ENST00000600442 RABEP1Q15276 862 aa15.31■□□□□ 0.04
ZNF548-210ENST00000600442 ZGPATQ8N5A5 531 aaKnown RBP15.31■□□□□ 0.04
ZNF548-210ENST00000600442 SNRKQ9NRH2 765 aa15.31■□□□□ 0.04
ZNF548-210ENST00000600442 NSFL1CQ9UNZ2 370 aaKnown RBP15.31■□□□□ 0.04
ZNF548-210ENST00000600442 ATP6V0A2Q9Y487 856 aa15.31■□□□□ 0.04
ZNF548-210ENST00000600442 ZBTB22O15209 634 aa15.3■□□□□ 0.04
ZNF548-210ENST00000600442 MCAMP43121 646 aa15.3■□□□□ 0.04
ZNF548-210ENST00000600442 BCAMP50895 628 aa15.3■□□□□ 0.04
ZNF548-210ENST00000600442 PDS5AQ29RF7 1337 aaKnown RBP15.3■□□□□ 0.04
ZNF548-210ENST00000600442 SPTY2D1Q68D10 685 aaPredicted RBP15.3■□□□□ 0.04
ZNF548-210ENST00000600442 CC2D2BQ6DHV5 1058 aa15.3■□□□□ 0.04
ZNF548-210ENST00000600442 CHADLQ6NUI6 762 aa15.3■□□□□ 0.04
ZNF548-210ENST00000600442 PODXL2Q9NZ53 605 aa15.3■□□□□ 0.04
ZNF548-210ENST00000600442 LRP2BPQ9P2M1 347 aa15.3■□□□□ 0.04
ZNF548-210ENST00000600442 SPEF2Q9C093 1822 aa15.29■□□□□ 0.04
ZNF548-210ENST00000600442 ST18O60284 1047 aa15.29■□□□□ 0.04
ZNF548-210ENST00000600442 IDH1O75874 414 aaKnown RBP15.29■□□□□ 0.04
ZNF548-210ENST00000600442 DDNO94850 711 aaPredicted RBP15.29■□□□□ 0.04
ZNF548-210ENST00000600442 UFL1O94874 794 aa15.29■□□□□ 0.04
ZNF548-210ENST00000600442 C15orf52Q6ZUT6 534 aaKnown RBP15.29■□□□□ 0.04
ZNF548-210ENST00000600442 FBXO33Q7Z6M2 555 aa15.29■□□□□ 0.04
ZNF548-210ENST00000600442 HSCBQ8IWL3 235 aa15.29■□□□□ 0.04
ZNF548-210ENST00000600442 EYA3Q99504 573 aa15.29■□□□□ 0.04
ZNF548-210ENST00000600442 TAOK3Q9H2K8 898 aa15.29■□□□□ 0.04
ZNF548-210ENST00000600442 HMG20BQ9P0W2 317 aa15.29■□□□□ 0.04
ZNF548-210ENST00000600442 MKRN1Q9UHC7 482 aaKnown RBP15.29■□□□□ 0.04
ZNF548-210ENST00000600442 LTBP3Q9NS15 1303 aa15.28■□□□□ 0.04
ZNF548-210ENST00000600442 G3V3G9 751 aa15.28■□□□□ 0.04
ZNF548-210ENST00000600442 C6orf229H3BNL8 230 aa15.28■□□□□ 0.04
ZNF548-210ENST00000600442 POTEIP0CG38 1075 aa15.28■□□□□ 0.04
ZNF548-210ENST00000600442 POTEJP0CG39 1038 aa15.28■□□□□ 0.04
ZNF548-210ENST00000600442 GYG1P46976 350 aa15.28■□□□□ 0.04
ZNF548-210ENST00000600442 RASGRF1Q13972 1273 aa15.28■□□□□ 0.04
ZNF548-210ENST00000600442 SLC9C2Q5TAH2 1124 aa15.28■□□□□ 0.04
ZNF548-210ENST00000600442 DCAF8Q5TAQ9 597 aa15.28■□□□□ 0.04
ZNF548-210ENST00000600442 APPBP2Q92624 585 aa15.28■□□□□ 0.04
ZNF548-210ENST00000600442 EDC3Q96F86 508 aaKnown RBP15.28■□□□□ 0.04
ZNF548-210ENST00000600442 FAM227BQ96M60 508 aa15.28■□□□□ 0.04
ZNF548-210ENST00000600442 CREBZFQ9NS37 354 aa15.28■□□□□ 0.04
ZNF548-210ENST00000600442 CTNNA3Q9UI47 895 aa15.28■□□□□ 0.04
ZNF548-210ENST00000600442 U3KPZ7 1027 aaPredicted RBP15.28■□□□□ 0.04
ZNF548-210ENST00000600442 SCN4AP35499 1836 aa15.27■□□□□ 0.04
ZNF548-210ENST00000600442 CCDC171Q6TFL3 1326 aa15.27■□□□□ 0.04
ZNF548-210ENST00000600442 UBE3CQ15386 1083 aa15.27■□□□□ 0.04
ZNF548-210ENST00000600442 ZMYM1Q5SVZ6 1142 aa15.27■□□□□ 0.04
ZNF548-210ENST00000600442 DPP8Q6V1X1 898 aaPredicted RBP15.27■□□□□ 0.04
ZNF548-210ENST00000600442 MPNDQ8N594 471 aa15.27■□□□□ 0.04
ZNF548-210ENST00000600442 WDR66Q8TBY9 1149 aa15.27■□□□□ 0.04
ZNF548-210ENST00000600442 FAM84BQ96KN1 310 aaPredicted RBP15.27■□□□□ 0.04
ZNF548-210ENST00000600442 ZC3H12CQ9C0D7 883 aaKnown RBP15.27■□□□□ 0.04
ZNF548-210ENST00000600442 CYP2E1P05181 493 aaPredicted RBP15.26■□□□□ 0.03
ZNF548-210ENST00000600442 HSPA4P34932 840 aa15.26■□□□□ 0.03
ZNF548-210ENST00000600442 MCM2P49736 904 aa15.26■□□□□ 0.03
ZNF548-210ENST00000600442 GPSM2P81274 684 aa15.26■□□□□ 0.03
ZNF548-210ENST00000600442 SCARF1Q14162 830 aa15.26■□□□□ 0.03
ZNF548-210ENST00000600442 KRT32Q14532 448 aa15.26■□□□□ 0.03
ZNF548-210ENST00000600442 PRPF40BQ6NWY9 871 aaKnown RBP15.26■□□□□ 0.03
ZNF548-210ENST00000600442 ERICH6Q7L0X2 663 aa15.26■□□□□ 0.03
ZNF548-210ENST00000600442 SUPT20HQ8NEM7 779 aa15.26■□□□□ 0.03
ZNF548-210ENST00000600442 NDUFB9Q9Y6M9 179 aa15.26■□□□□ 0.03
ZNF548-210ENST00000600442 A0A0D9SFI3 127 aa15.25■□□□□ 0.03
ZNF548-210ENST00000600442 SNAP23O00161 211 aa15.25■□□□□ 0.03
ZNF548-210ENST00000600442 GNAT2P19087 354 aa15.25■□□□□ 0.03
ZNF548-210ENST00000600442 PSMA5P28066 241 aa15.25■□□□□ 0.03
ZNF548-210ENST00000600442 SOGA3Q5TF21 947 aa15.25■□□□□ 0.03
ZNF548-210ENST00000600442 MAP4K1Q92918 833 aa15.25■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 19 ms