RNA–Protein interactions for RNA: ENST00000555462.5

PPP4R3A-208, Transcript of protein phosphatase 4 regulatory subunit 3A, humanhuman

TSL 1 (best) BASIC

Gene PPP4R3A, Length 3,236 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPP4R3A-208ENST00000555462 DIP2BQ9P265 1576 aa19.83■□□□□ 0.76
PPP4R3A-208ENST00000555462 ZNF202O95125 648 aa19.83■□□□□ 0.76
PPP4R3A-208ENST00000555462 PPP1R13BQ96KQ4 1090 aa19.83■□□□□ 0.76
PPP4R3A-208ENST00000555462 HAUS7Q99871 368 aa19.83■□□□□ 0.76
PPP4R3A-208ENST00000555462 A0A1B0GUL7 405 aa19.82■□□□□ 0.76
PPP4R3A-208ENST00000555462 SLU7O95391 586 aaKnown RBP19.82■□□□□ 0.76
PPP4R3A-208ENST00000555462 SLFN14P0C7P3 912 aa19.82■□□□□ 0.76
PPP4R3A-208ENST00000555462 ARHGAP30Q7Z6I6 1101 aaPredicted RBP19.82■□□□□ 0.76
PPP4R3A-208ENST00000555462 HDAC5Q9UQL6 1122 aa19.82■□□□□ 0.76
PPP4R3A-208ENST00000555462 SNAP23O00161 211 aa19.81■□□□□ 0.76
PPP4R3A-208ENST00000555462 SPTLC2O15270 562 aa19.81■□□□□ 0.76
PPP4R3A-208ENST00000555462 PRC1O43663 620 aa19.81■□□□□ 0.76
PPP4R3A-208ENST00000555462 TRMT44Q8IYL2 757 aaKnown RBP19.81■□□□□ 0.76
PPP4R3A-208ENST00000555462 FMR1NBQ8N0W7 255 aaPredicted RBP19.81■□□□□ 0.76
PPP4R3A-208ENST00000555462 KRT222Q8N1A0 295 aa19.81■□□□□ 0.76
PPP4R3A-208ENST00000555462 KIAA1468Q9P260 1216 aa19.81■□□□□ 0.76
PPP4R3A-208ENST00000555462 PXDNLA1KZ92 1463 aa19.81■□□□□ 0.76
PPP4R3A-208ENST00000555462 WDHD1O75717 1129 aaPredicted RBP19.81■□□□□ 0.76
PPP4R3A-208ENST00000555462 USPL1Q5W0Q7 1092 aa19.81■□□□□ 0.76
PPP4R3A-208ENST00000555462 CPLX3Q8WVH0 158 aa19.81■□□□□ 0.76
PPP4R3A-208ENST00000555462 MRFAP1L1Q96HT8 127 aa19.81■□□□□ 0.76
PPP4R3A-208ENST00000555462 CARMIL3Q8ND23 1372 aa19.81■□□□□ 0.76
PPP4R3A-208ENST00000555462 NYAP1Q6ZVC0 841 aa19.81■□□□□ 0.76
PPP4R3A-208ENST00000555462 ARHGEF25Q86VW2 580 aa19.81■□□□□ 0.76
PPP4R3A-208ENST00000555462 GRAMD1CQ8IYS0 662 aa19.81■□□□□ 0.76
PPP4R3A-208ENST00000555462 SMARCC2Q8TAQ2 1214 aa19.81■□□□□ 0.76
PPP4R3A-208ENST00000555462 FEZ1Q99689 392 aa19.81■□□□□ 0.76
PPP4R3A-208ENST00000555462 DIP2AQ14689 1571 aa19.8■□□□□ 0.76
PPP4R3A-208ENST00000555462 ZNF397Q8NF99 534 aaPredicted RBP19.8■□□□□ 0.76
PPP4R3A-208ENST00000555462 DESI2Q9BSY9 194 aa19.8■□□□□ 0.76
PPP4R3A-208ENST00000555462 PUS7LQ9H0K6 701 aaKnown RBP19.8■□□□□ 0.76
PPP4R3A-208ENST00000555462 COPRSQ9NQ92 184 aa19.8■□□□□ 0.76
PPP4R3A-208ENST00000555462 CARD6Q9BX69 1037 aa19.8■□□□□ 0.76
PPP4R3A-208ENST00000555462 PFKFB1P16118 471 aa19.8■□□□□ 0.76
PPP4R3A-208ENST00000555462 SKIDA1Q1XH10 827 aa19.8■□□□□ 0.76
PPP4R3A-208ENST00000555462 LINC00301Q8NCQ3 95 aa19.8■□□□□ 0.76
PPP4R3A-208ENST00000555462 NAT10Q9H0A0 1025 aaKnown RBP19.8■□□□□ 0.76
PPP4R3A-208ENST00000555462 SLC52A2Q9HAB3 445 aa19.8■□□□□ 0.76
PPP4R3A-208ENST00000555462 FGAP02671 866 aa19.79■□□□□ 0.76
PPP4R3A-208ENST00000555462 KARSQ15046 597 aaKnown RBP19.79■□□□□ 0.76
PPP4R3A-208ENST00000555462 TAF7LQ5H9L4 462 aa19.79■□□□□ 0.76
PPP4R3A-208ENST00000555462 RRP12Q5JTH9 1297 aaKnown RBP19.79■□□□□ 0.76
PPP4R3A-208ENST00000555462 FAM89AQ96GI7 184 aa19.79■□□□□ 0.76
PPP4R3A-208ENST00000555462 ZKSCAN3Q9BRR0 538 aa19.79■□□□□ 0.76
PPP4R3A-208ENST00000555462 IRX2Q9BZI1 471 aaPredicted RBP19.79■□□□□ 0.76
PPP4R3A-208ENST00000555462 GPTP24298 496 aa19.79■□□□□ 0.76
PPP4R3A-208ENST00000555462 ADKP55263 362 aaKnown RBP19.79■□□□□ 0.76
PPP4R3A-208ENST00000555462 CABP4P57796 275 aa19.79■□□□□ 0.76
PPP4R3A-208ENST00000555462 HELBQ8NG08 1087 aaPredicted RBP19.79■□□□□ 0.76
PPP4R3A-208ENST00000555462 FMN2Q9NZ56 1722 aa19.79■□□□□ 0.76
PPP4R3A-208ENST00000555462 TFRCP02786 760 aaKnown RBP19.78■□□□□ 0.76
PPP4R3A-208ENST00000555462 FANCCQ00597 558 aa19.78■□□□□ 0.76
PPP4R3A-208ENST00000555462 RALYLQ86SE5 291 aaKnown RBP19.78■□□□□ 0.76
PPP4R3A-208ENST00000555462 KCNH5Q8NCM2 988 aa19.78■□□□□ 0.76
PPP4R3A-208ENST00000555462 ERBB3P21860 1342 aa19.78■□□□□ 0.76
PPP4R3A-208ENST00000555462 CLCN6P51797 869 aa19.78■□□□□ 0.76
PPP4R3A-208ENST00000555462 UBASH3AP57075 661 aa19.78■□□□□ 0.76
PPP4R3A-208ENST00000555462 MROH7-TTC4A0A0A0MT08 1334 aa19.78■□□□□ 0.76
PPP4R3A-208ENST00000555462 IDH1O75874 414 aaKnown RBP19.78■□□□□ 0.76
PPP4R3A-208ENST00000555462 ZAP70P43403 619 aa19.78■□□□□ 0.76
PPP4R3A-208ENST00000555462 TERF2Q15554 542 aa19.78■□□□□ 0.76
PPP4R3A-208ENST00000555462 ATG9AQ7Z3C6 839 aa19.78■□□□□ 0.76
PPP4R3A-208ENST00000555462 RGPD2P0DJD1 1756 aa19.77■□□□□ 0.76
PPP4R3A-208ENST00000555462 hCG_1642624A0A1W2PR95 340 aa19.77■□□□□ 0.76
PPP4R3A-208ENST00000555462 TEX35Q5T0J7 233 aa19.77■□□□□ 0.76
PPP4R3A-208ENST00000555462 MNS1Q8NEH6 495 aa19.77■□□□□ 0.76
PPP4R3A-208ENST00000555462 NEK11Q8NG66 645 aa19.77■□□□□ 0.76
PPP4R3A-208ENST00000555462 FANCLQ9NW38 375 aa19.77■□□□□ 0.76
PPP4R3A-208ENST00000555462 EXOSC10Q01780 885 aaKnown RBP19.77■□□□□ 0.75
PPP4R3A-208ENST00000555462 TTC39AQ5SRH9 613 aa19.77■□□□□ 0.75
PPP4R3A-208ENST00000555462 KRT28Q7Z3Y7 464 aa19.77■□□□□ 0.75
PPP4R3A-208ENST00000555462 KIF20AO95235 890 aa19.76■□□□□ 0.75
PPP4R3A-208ENST00000555462 MYSM1Q5VVJ2 828 aa19.76■□□□□ 0.75
PPP4R3A-208ENST00000555462 NAA16Q6N069 864 aaPredicted RBP19.76■□□□□ 0.75
PPP4R3A-208ENST00000555462 NFXL1Q6ZNB6 911 aa19.76■□□□□ 0.75
PPP4R3A-208ENST00000555462 FANCGO15287 622 aa19.76■□□□□ 0.75
PPP4R3A-208ENST00000555462 SNRPA1P09661 255 aaKnown RBP19.76■□□□□ 0.75
PPP4R3A-208ENST00000555462 CASP1P29466 404 aa19.76■□□□□ 0.75
PPP4R3A-208ENST00000555462 KLHL10Q6JEL2 608 aa19.76■□□□□ 0.75
PPP4R3A-208ENST00000555462 CTAGE5O15320 804 aa19.76■□□□□ 0.75
PPP4R3A-208ENST00000555462 RNF113AO15541 343 aaKnown RBP19.76■□□□□ 0.75
PPP4R3A-208ENST00000555462 NBPF26B4DH59 902 aa19.75■□□□□ 0.75
PPP4R3A-208ENST00000555462 CYP27B1O15528 508 aa19.75■□□□□ 0.75
PPP4R3A-208ENST00000555462 TATP17735 454 aaPredicted RBP19.75■□□□□ 0.75
PPP4R3A-208ENST00000555462 TSGA10IPQ3SY00 556 aa19.75■□□□□ 0.75
PPP4R3A-208ENST00000555462 NBPF14Q5TI25 921 aa19.75■□□□□ 0.75
PPP4R3A-208ENST00000555462 NBPF10Q6P3W6 841 aaKnown RBP19.75■□□□□ 0.75
PPP4R3A-208ENST00000555462 NBPF15Q8N660 670 aa19.75■□□□□ 0.75
PPP4R3A-208ENST00000555462 ERO1AQ96HE7 468 aa19.75■□□□□ 0.75
PPP4R3A-208ENST00000555462 CHMP4AQ9BY43 222 aa19.75■□□□□ 0.75
PPP4R3A-208ENST00000555462 A0A0U1RQJ8 604 aa19.75■□□□□ 0.75
PPP4R3A-208ENST00000555462 SYKP43405 635 aa19.75■□□□□ 0.75
PPP4R3A-208ENST00000555462 GRIN1Q05586 938 aa19.75■□□□□ 0.75
PPP4R3A-208ENST00000555462 ADALQ6DHV7 355 aa19.75■□□□□ 0.75
PPP4R3A-208ENST00000555462 ATRIPQ8WXE1 791 aa19.75■□□□□ 0.75
PPP4R3A-208ENST00000555462 BBXQ8WY36 941 aaPredicted RBP19.75■□□□□ 0.75
PPP4R3A-208ENST00000555462 UBXN4Q92575 508 aa19.75■□□□□ 0.75
PPP4R3A-208ENST00000555462 B4E1Z4 1266 aa19.74■□□□□ 0.75
PPP4R3A-208ENST00000555462 CDK11BP21127 795 aaKnown RBP19.74■□□□□ 0.75
PPP4R3A-208ENST00000555462 CDC27P30260 824 aa19.74■□□□□ 0.75
Retrieved 100 of 20,778 RNA–protein pairs in 44.2 ms