RNA–Protein interactions for RNA: ENST00000508466.1

LIMCH1-207, Transcript of LIM and calponin homology domains 1, humanhuman

TSL 2

Gene LIMCH1, Length 3,051 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMCH1-207ENST00000508466 CCDC150Q8NCX0 1101 aa8.32□□□□□ -1.08
LIMCH1-207ENST00000508466 MIEF2Q96C03 454 aa8.32□□□□□ -1.08
LIMCH1-207ENST00000508466 PSMB7Q99436 277 aa8.32□□□□□ -1.08
LIMCH1-207ENST00000508466 NAT10Q9H0A0 1025 aaKnown RBP8.32□□□□□ -1.08
LIMCH1-207ENST00000508466 MED4Q9NPJ6 270 aa8.32□□□□□ -1.08
LIMCH1-207ENST00000508466 IRAK4Q9NWZ3 460 aa8.32□□□□□ -1.08
LIMCH1-207ENST00000508466 PHLPP2Q6ZVD8 1323 aa8.31□□□□□ -1.08
LIMCH1-207ENST00000508466 CCDC151A5D8V7 595 aa8.31□□□□□ -1.08
LIMCH1-207ENST00000508466 CUTAO60888 179 aa8.31□□□□□ -1.08
LIMCH1-207ENST00000508466 CAND2O75155 1236 aa8.31□□□□□ -1.08
LIMCH1-207ENST00000508466 EIF3JO75822 258 aaKnown RBP8.31□□□□□ -1.08
LIMCH1-207ENST00000508466 UBTFL1P0CB47 393 aaPredicted RBP8.31□□□□□ -1.08
LIMCH1-207ENST00000508466 MYBL2P10244 700 aa8.31□□□□□ -1.08
LIMCH1-207ENST00000508466 CDC27P30260 824 aa8.31□□□□□ -1.08
LIMCH1-207ENST00000508466 CDC25AP30304 524 aa8.31□□□□□ -1.08
LIMCH1-207ENST00000508466 SARNPP82979 210 aaKnown RBP8.31□□□□□ -1.08
LIMCH1-207ENST00000508466 TEFQ10587 303 aa8.31□□□□□ -1.08
LIMCH1-207ENST00000508466 NCAPHQ15003 741 aa8.31□□□□□ -1.08
LIMCH1-207ENST00000508466 KLHL10Q6JEL2 608 aa8.31□□□□□ -1.08
LIMCH1-207ENST00000508466 SUGP1Q8IWZ8 645 aaKnown RBP8.31□□□□□ -1.08
LIMCH1-207ENST00000508466 GRAMD1CQ8IYS0 662 aa8.31□□□□□ -1.08
LIMCH1-207ENST00000508466 KIFC2Q96AC6 838 aa8.31□□□□□ -1.08
LIMCH1-207ENST00000508466 ZBTB10Q96DT7 871 aa8.31□□□□□ -1.08
LIMCH1-207ENST00000508466 CEP89Q96ST8 783 aa8.31□□□□□ -1.08
LIMCH1-207ENST00000508466 KIAA1468Q9P260 1216 aa8.31□□□□□ -1.08
LIMCH1-207ENST00000508466 ODF2LQ9ULJ1 636 aa8.31□□□□□ -1.08
LIMCH1-207ENST00000508466 SH3BP1Q9Y3L3 701 aa8.31□□□□□ -1.08
LIMCH1-207ENST00000508466 MYOM1P52179 1685 aa8.31□□□□□ -1.08
LIMCH1-207ENST00000508466 ELF1P32519 619 aa8.31□□□□□ -1.08
LIMCH1-207ENST00000508466 NF2P35240 595 aa8.31□□□□□ -1.08
LIMCH1-207ENST00000508466 ADD1P35611 737 aaKnown RBP8.31□□□□□ -1.08
LIMCH1-207ENST00000508466 CEBPAP49715 358 aaPredicted RBP8.31□□□□□ -1.08
LIMCH1-207ENST00000508466 IRAK1P51617 712 aa8.31□□□□□ -1.08
LIMCH1-207ENST00000508466 CLNS1AP54105 237 aaKnown RBP8.31□□□□□ -1.08
LIMCH1-207ENST00000508466 INHBEP58166 350 aa8.31□□□□□ -1.08
LIMCH1-207ENST00000508466 MAP2K1Q02750 393 aaPredicted RBP8.31□□□□□ -1.08
LIMCH1-207ENST00000508466 STK38Q15208 465 aa8.31□□□□□ -1.08
LIMCH1-207ENST00000508466 MAEAQ7L5Y9 396 aa8.31□□□□□ -1.08
LIMCH1-207ENST00000508466 SLC35F6Q8N357 371 aa8.31□□□□□ -1.08
LIMCH1-207ENST00000508466 ZKSCAN4Q969J2 545 aaPredicted RBP8.31□□□□□ -1.08
LIMCH1-207ENST00000508466 FAXDC2Q96IV6 333 aa8.31□□□□□ -1.08
LIMCH1-207ENST00000508466 USP44Q9H0E7 712 aa8.31□□□□□ -1.08
LIMCH1-207ENST00000508466 SH2B1Q9NRF2 756 aaPredicted RBP8.31□□□□□ -1.08
LIMCH1-207ENST00000508466 TLR7Q9NYK1 1049 aaKnown RBP8.31□□□□□ -1.08
LIMCH1-207ENST00000508466 TTC41PQ6P2S7 1318 aa8.31□□□□□ -1.08
LIMCH1-207ENST00000508466 PDCP20941 246 aa8.31□□□□□ -1.08
LIMCH1-207ENST00000508466 SEC24CP53992 1094 aa8.31□□□□□ -1.08
LIMCH1-207ENST00000508466 PDE4BQ07343 736 aa8.31□□□□□ -1.08
LIMCH1-207ENST00000508466 SWT1Q5T5J6 900 aaKnown RBP8.31□□□□□ -1.08
LIMCH1-207ENST00000508466 IQUBQ8NA54 791 aa8.31□□□□□ -1.08
LIMCH1-207ENST00000508466 ZSCAN31Q96LW9 406 aaPredicted RBP8.31□□□□□ -1.08
LIMCH1-207ENST00000508466 INTS13Q9NVM9 706 aa8.31□□□□□ -1.08
LIMCH1-207ENST00000508466 PSD3Q9NYI0 1048 aa8.31□□□□□ -1.08
LIMCH1-207ENST00000508466 TEX33O43247 280 aa8.3□□□□□ -1.08
LIMCH1-207ENST00000508466 DNA2P51530 1060 aa8.3□□□□□ -1.08
LIMCH1-207ENST00000508466 WAPLQ7Z5K2 1190 aa8.3□□□□□ -1.08
LIMCH1-207ENST00000508466 EEF2KMTQ96G04 330 aa8.3□□□□□ -1.08
LIMCH1-207ENST00000508466 PLCD4Q9BRC7 762 aa8.3□□□□□ -1.08
LIMCH1-207ENST00000508466 HSD3B7Q9H2F3 369 aa8.3□□□□□ -1.08
LIMCH1-207ENST00000508466 VEZTQ9HBM0 779 aa8.3□□□□□ -1.08
LIMCH1-207ENST00000508466 GNL3LQ9NVN8 582 aaKnown RBP8.3□□□□□ -1.08
LIMCH1-207ENST00000508466 MKRN1Q9UHC7 482 aaKnown RBP8.3□□□□□ -1.08
LIMCH1-207ENST00000508466 CFAP45Q9UL16 551 aa8.3□□□□□ -1.08
LIMCH1-207ENST00000508466 PIK3R4Q99570 1358 aa8.3□□□□□ -1.08
LIMCH1-207ENST00000508466 ADGBQ8N7X0 1667 aa8.3□□□□□ -1.08
LIMCH1-207ENST00000508466 MPHOSPH10O00566 681 aaKnown RBP8.3□□□□□ -1.08
LIMCH1-207ENST00000508466 ZSCAN12O43309 604 aa8.3□□□□□ -1.08
LIMCH1-207ENST00000508466 ZPR1O75312 459 aa8.3□□□□□ -1.08
LIMCH1-207ENST00000508466 KIF4AO95239 1232 aa8.3□□□□□ -1.08
LIMCH1-207ENST00000508466 USP5P45974 858 aa8.3□□□□□ -1.08
LIMCH1-207ENST00000508466 SETQ01105 290 aaPredicted RBP8.3□□□□□ -1.08
LIMCH1-207ENST00000508466 APBA1Q02410 837 aa8.3□□□□□ -1.08
LIMCH1-207ENST00000508466 NECTIN1Q15223 517 aa8.3□□□□□ -1.08
LIMCH1-207ENST00000508466 SRGAP1Q7Z6B7 1085 aa8.3□□□□□ -1.08
LIMCH1-207ENST00000508466 AACSQ86V21 672 aa8.3□□□□□ -1.08
LIMCH1-207ENST00000508466 OTUD6BQ8N6M0 293 aa8.3□□□□□ -1.08
LIMCH1-207ENST00000508466 PARD3BQ8TEW8 1205 aa8.3□□□□□ -1.08
LIMCH1-207ENST00000508466 RRP36Q96EU6 259 aaKnown RBP8.3□□□□□ -1.08
LIMCH1-207ENST00000508466 FSD1Q9BTV5 496 aa8.3□□□□□ -1.08
LIMCH1-207ENST00000508466 OPLAHO14841 1288 aa8.29□□□□□ -1.08
LIMCH1-207ENST00000508466 CASP1P29466 404 aa8.29□□□□□ -1.08
LIMCH1-207ENST00000508466 GCKP35557 465 aa8.29□□□□□ -1.08
LIMCH1-207ENST00000508466 SLC7A5Q01650 507 aa8.29□□□□□ -1.08
LIMCH1-207ENST00000508466 FLIIQ13045 1269 aa8.29□□□□□ -1.08
LIMCH1-207ENST00000508466 RAD9BQ6WBX8 426 aa8.29□□□□□ -1.08
LIMCH1-207ENST00000508466 USHBP1Q8N6Y0 703 aa8.29□□□□□ -1.08
LIMCH1-207ENST00000508466 ENGASEQ8NFI3 743 aa8.29□□□□□ -1.08
LIMCH1-207ENST00000508466 SAMSN1Q9NSI8 373 aaKnown RBP8.29□□□□□ -1.08
LIMCH1-207ENST00000508466 SMARCAL1Q9NZC9 954 aa8.29□□□□□ -1.08
LIMCH1-207ENST00000508466 URB2Q14146 1524 aaKnown RBP8.29□□□□□ -1.08
LIMCH1-207ENST00000508466 CCDC196A0A1B0GTZ2 297 aa8.29□□□□□ -1.08
LIMCH1-207ENST00000508466 NDUFAB1O14561 156 aa8.29□□□□□ -1.08
LIMCH1-207ENST00000508466 ZNF185O15231 689 aa8.29□□□□□ -1.08
LIMCH1-207ENST00000508466 IFT88Q13099 833 aa8.29□□□□□ -1.08
LIMCH1-207ENST00000508466 MEX3CQ5U5Q3 659 aaKnown RBP8.29□□□□□ -1.08
LIMCH1-207ENST00000508466 CHADLQ6NUI6 762 aa8.29□□□□□ -1.08
LIMCH1-207ENST00000508466 AIFM3Q96NN9 605 aa8.29□□□□□ -1.08
LIMCH1-207ENST00000508466 NLRP3Q96P20 1036 aa8.29□□□□□ -1.08
LIMCH1-207ENST00000508466 STK31Q9BXU1 1019 aa8.29□□□□□ -1.08
LIMCH1-207ENST00000508466 GUCA1BQ9UMX6 200 aa8.29□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 49.3 ms