RNA–Protein interactions for RNA: ENST00000475141.2

FRMD4A-204, Transcript of FERM domain containing 4A, humanhuman

TSL 1 (best) BASIC

Gene FRMD4A, Length 1,233 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FRMD4A-204ENST00000475141 IGHDP01880 384 aa17.25■□□□□ 0.35
FRMD4A-204ENST00000475141 PNMA8AQ86V59 439 aaPredicted RBP17.25■□□□□ 0.35
FRMD4A-204ENST00000475141 GPC2Q8N158 579 aa17.25■□□□□ 0.35
FRMD4A-204ENST00000475141 CLASRPQ8N2M8 674 aaKnown RBP17.25■□□□□ 0.35
FRMD4A-204ENST00000475141 LPIN2Q92539 896 aa17.25■□□□□ 0.35
FRMD4A-204ENST00000475141 ZC3H12CQ9C0D7 883 aaKnown RBP17.25■□□□□ 0.35
FRMD4A-204ENST00000475141 BCL11AQ9H165 835 aa17.25■□□□□ 0.35
FRMD4A-204ENST00000475141 POLLQ9UGP5 575 aa17.25■□□□□ 0.35
FRMD4A-204ENST00000475141 MED23Q9ULK4 1368 aa17.25■□□□□ 0.35
FRMD4A-204ENST00000475141 PPIP5K2O43314 1243 aa17.24■□□□□ 0.35
FRMD4A-204ENST00000475141 EIF6P56537 245 aaKnown RBP17.24■□□□□ 0.35
FRMD4A-204ENST00000475141 WASHC4Q2M389 1173 aa17.24■□□□□ 0.35
FRMD4A-204ENST00000475141 DEFB115Q30KQ5 88 aa17.24■□□□□ 0.35
FRMD4A-204ENST00000475141 TNNI3KQ59H18 835 aa17.24■□□□□ 0.35
FRMD4A-204ENST00000475141 SMC5Q8IY18 1101 aa17.24■□□□□ 0.35
FRMD4A-204ENST00000475141 VPS33BQ9H267 617 aa17.24■□□□□ 0.35
FRMD4A-204ENST00000475141 IL1RAPL2Q9NP60 686 aa17.24■□□□□ 0.35
FRMD4A-204ENST00000475141 GPR108Q9NPR9 543 aa17.24■□□□□ 0.35
FRMD4A-204ENST00000475141 FPGT-TNNI3KV9GXZ4 949 aa17.24■□□□□ 0.35
FRMD4A-204ENST00000475141 ADAMTSL1Q8N6G6 1762 aa17.24■□□□□ 0.35
FRMD4A-204ENST00000475141 ARAP2Q8WZ64 1704 aa17.24■□□□□ 0.35
FRMD4A-204ENST00000475141 COL4A5P29400 1685 aa17.23■□□□□ 0.35
FRMD4A-204ENST00000475141 A0A1B0GUL7 405 aa17.23■□□□□ 0.35
FRMD4A-204ENST00000475141 G3V3G9 751 aa17.23■□□□□ 0.35
FRMD4A-204ENST00000475141 GABBR2O75899 941 aa17.23■□□□□ 0.35
FRMD4A-204ENST00000475141 CTCFP49711 727 aaPredicted RBP17.23■□□□□ 0.35
FRMD4A-204ENST00000475141 LBX1P52954 281 aa17.23■□□□□ 0.35
FRMD4A-204ENST00000475141 FMR1Q06787 632 aaKnown RBP eCLIP17.23■□□□□ 0.35
FRMD4A-204ENST00000475141 CAVIN4Q5BKX8 364 aa17.23■□□□□ 0.35
FRMD4A-204ENST00000475141 DCAF8Q5TAQ9 597 aa17.23■□□□□ 0.35
FRMD4A-204ENST00000475141 VPS37DQ86XT2 251 aa17.23■□□□□ 0.35
FRMD4A-204ENST00000475141 PLCD3Q8N3E9 789 aa17.23■□□□□ 0.35
FRMD4A-204ENST00000475141 LARGE2Q8N3Y3 721 aa17.23■□□□□ 0.35
FRMD4A-204ENST00000475141 NEUROD6Q96NK8 337 aa17.23■□□□□ 0.35
FRMD4A-204ENST00000475141 ABT1Q9ULW3 272 aaKnown RBP17.23■□□□□ 0.35
FRMD4A-204ENST00000475141 SNAP23O00161 211 aa17.22■□□□□ 0.35
FRMD4A-204ENST00000475141 FGFR2P21802 821 aa17.22■□□□□ 0.35
FRMD4A-204ENST00000475141 EPS15P42566 896 aa17.22■□□□□ 0.35
FRMD4A-204ENST00000475141 KIAA2012Q0VF49 1180 aa17.22■□□□□ 0.35
FRMD4A-204ENST00000475141 GORABQ5T7V8 394 aa17.22■□□□□ 0.35
FRMD4A-204ENST00000475141 ANKRD45Q5TZF3 282 aa17.22■□□□□ 0.35
FRMD4A-204ENST00000475141 CENPQQ7L2Z9 268 aaPredicted RBP17.22■□□□□ 0.35
FRMD4A-204ENST00000475141 ZNF804AQ7Z570 1209 aa17.22■□□□□ 0.35
FRMD4A-204ENST00000475141 AACSQ86V21 672 aa17.22■□□□□ 0.35
FRMD4A-204ENST00000475141 GPR101Q96P66 508 aaPredicted RBP17.22■□□□□ 0.35
FRMD4A-204ENST00000475141 PRDM10Q9NQV6 1147 aa17.22■□□□□ 0.35
FRMD4A-204ENST00000475141 WBP1LQ9NX94 342 aa17.22■□□□□ 0.35
FRMD4A-204ENST00000475141 RIMBP2O15034 1052 aa17.21■□□□□ 0.35
FRMD4A-204ENST00000475141 IFIT2P09913 472 aaKnown RBP17.21■□□□□ 0.35
FRMD4A-204ENST00000475141 LMOD1P29536 600 aaPredicted RBP17.21■□□□□ 0.35
FRMD4A-204ENST00000475141 AOC3Q16853 763 aa17.21■□□□□ 0.35
FRMD4A-204ENST00000475141 B4GALNT3Q6L9W6 998 aa17.21■□□□□ 0.35
FRMD4A-204ENST00000475141 C15orf52Q6ZUT6 534 aaKnown RBP17.21■□□□□ 0.35
FRMD4A-204ENST00000475141 SMARCA5O60264 1052 aaPredicted RBP17.2■□□□□ 0.34
FRMD4A-204ENST00000475141 KLRK1P26718 216 aa17.2■□□□□ 0.34
FRMD4A-204ENST00000475141 TIMM10P62072 90 aa17.2■□□□□ 0.34
FRMD4A-204ENST00000475141 GRM1Q13255 1194 aa17.2■□□□□ 0.34
FRMD4A-204ENST00000475141 NIM1KQ8IY84 436 aa17.2■□□□□ 0.34
FRMD4A-204ENST00000475141 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP17.2■□□□□ 0.34
FRMD4A-204ENST00000475141 WDR33Q9C0J8 1336 aaKnown RBP17.2■□□□□ 0.34
FRMD4A-204ENST00000475141 WTIPA6NIX2 430 aaPredicted RBP17.19■□□□□ 0.34
FRMD4A-204ENST00000475141 RASSF10A6NK89 507 aa17.19■□□□□ 0.34
FRMD4A-204ENST00000475141 SCNN1DP51172 638 aa17.19■□□□□ 0.34
FRMD4A-204ENST00000475141 PAXIP1Q6ZW49 1069 aaPredicted RBP17.19■□□□□ 0.34
FRMD4A-204ENST00000475141 EAF2Q96CJ1 260 aaPredicted RBP17.19■□□□□ 0.34
FRMD4A-204ENST00000475141 XAGE2Q96GT9 111 aa17.19■□□□□ 0.34
FRMD4A-204ENST00000475141 GNL3LQ9NVN8 582 aaKnown RBP17.19■□□□□ 0.34
FRMD4A-204ENST00000475141 ADORA1P30542 326 aa17.18■□□□□ 0.34
FRMD4A-204ENST00000475141 HIBADHP31937 336 aaKnown RBP17.18■□□□□ 0.34
FRMD4A-204ENST00000475141 GYG1P46976 350 aa17.18■□□□□ 0.34
FRMD4A-204ENST00000475141 CCDC158Q5M9N0 1113 aa17.18■□□□□ 0.34
FRMD4A-204ENST00000475141 GPATCH3Q96I76 525 aa17.18■□□□□ 0.34
FRMD4A-204ENST00000475141 COA1Q9GZY4 146 aa17.18■□□□□ 0.34
FRMD4A-204ENST00000475141 CCDC8Q9H0W5 538 aaPredicted RBP17.18■□□□□ 0.34
FRMD4A-204ENST00000475141 TRAF5O00463 557 aa17.17■□□□□ 0.34
FRMD4A-204ENST00000475141 FRAT2O75474 233 aaPredicted RBP17.17■□□□□ 0.34
FRMD4A-204ENST00000475141 HSPA8P11142 646 aaKnown RBP17.17■□□□□ 0.34
FRMD4A-204ENST00000475141 MNX1P50219 401 aaPredicted RBP17.17■□□□□ 0.34
FRMD4A-204ENST00000475141 NUCB1Q02818 461 aa17.17■□□□□ 0.34
FRMD4A-204ENST00000475141 TXNRD3Q86VQ6 643 aa17.17■□□□□ 0.34
FRMD4A-204ENST00000475141 CHD1LQ86WJ1 897 aa17.17■□□□□ 0.34
FRMD4A-204ENST00000475141 DBNDD2Q9BQY9 259 aa17.17■□□□□ 0.34
FRMD4A-204ENST00000475141 LNPKQ9C0E8 428 aa17.17■□□□□ 0.34
FRMD4A-204ENST00000475141 DBNDD1Q9H9R9 158 aa17.17■□□□□ 0.34
FRMD4A-204ENST00000475141 DBNLQ9UJU6 430 aaKnown RBP17.17■□□□□ 0.34
FRMD4A-204ENST00000475141 IRS2Q9Y4H2 1338 aa17.17■□□□□ 0.34
FRMD4A-204ENST00000475141 ECE2O60344 883 aa17.16■□□□□ 0.34
FRMD4A-204ENST00000475141 DOK7Q18PE1 504 aa17.16■□□□□ 0.34
FRMD4A-204ENST00000475141 TTC39AQ5SRH9 613 aa17.16■□□□□ 0.34
FRMD4A-204ENST00000475141 CYP4F22Q6NT55 531 aa17.16■□□□□ 0.34
FRMD4A-204ENST00000475141 FAM84BQ96KN1 310 aaPredicted RBP17.16■□□□□ 0.34
FRMD4A-204ENST00000475141 TLR7Q9NYK1 1049 aaKnown RBP17.16■□□□□ 0.34
FRMD4A-204ENST00000475141 MYH13Q9UKX3 1938 aa17.15■□□□□ 0.34
FRMD4A-204ENST00000475141 BCAMP50895 628 aa17.15■□□□□ 0.34
FRMD4A-204ENST00000475141 CLCN6P51797 869 aa17.15■□□□□ 0.34
FRMD4A-204ENST00000475141 CST9Q5W186 159 aa17.15■□□□□ 0.34
FRMD4A-204ENST00000475141 CCDC102BQ68D86 513 aa17.15■□□□□ 0.34
FRMD4A-204ENST00000475141 PODNQ7Z5L7 613 aa17.15■□□□□ 0.34
FRMD4A-204ENST00000475141 FBXO33Q7Z6M2 555 aa17.15■□□□□ 0.34
FRMD4A-204ENST00000475141 CD209Q9NNX6 404 aa17.15■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 40.9 ms