RNA–Protein interactions for RNA: ENST00000474539.5

CCNL1-215, Transcript of cyclin L1, humanhuman

TSL 1 (best)

Gene CCNL1, Length 4,799 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCNL1-215ENST00000474539 SMCR8Q8TEV9 937 aaPredicted RBP5.3□□□□□ -1.56
CCNL1-215ENST00000474539 DLC1Q96QB1 1528 aa5.3□□□□□ -1.56
CCNL1-215ENST00000474539 SPAG1Q07617 926 aa5.3□□□□□ -1.56
CCNL1-215ENST00000474539 CKAP2LQ8IYA6 745 aa5.3□□□□□ -1.56
CCNL1-215ENST00000474539 CCDC112Q8NEF3 446 aa5.3□□□□□ -1.56
CCNL1-215ENST00000474539 CHPF2Q9P2E5 772 aa5.3□□□□□ -1.56
CCNL1-215ENST00000474539 GTF3C5Q9Y5Q8 519 aaPredicted RBP5.3□□□□□ -1.56
CCNL1-215ENST00000474539 CRB1P82279 1406 aa5.3□□□□□ -1.56
CCNL1-215ENST00000474539 HMGB1P1B2RPK0 211 aaPredicted RBP5.3□□□□□ -1.56
CCNL1-215ENST00000474539 PPEF1O14829 653 aaPredicted RBP5.3□□□□□ -1.56
CCNL1-215ENST00000474539 SSBP05455 408 aaKnown RBP eCLIP5.3□□□□□ -1.56
CCNL1-215ENST00000474539 VIMP08670 466 aaKnown RBP5.3□□□□□ -1.56
CCNL1-215ENST00000474539 CCDC192P0DO97 292 aa5.3□□□□□ -1.56
CCNL1-215ENST00000474539 GCKRQ14397 625 aa5.3□□□□□ -1.56
CCNL1-215ENST00000474539 HAUS3Q68CZ6 603 aa5.3□□□□□ -1.56
CCNL1-215ENST00000474539 BRINP3Q76B58 766 aa5.3□□□□□ -1.56
CCNL1-215ENST00000474539 CAGE1Q8TC20 777 aa5.3□□□□□ -1.56
CCNL1-215ENST00000474539 CABLES1Q8TDN4 633 aa5.3□□□□□ -1.56
CCNL1-215ENST00000474539 CDHR1Q96JP9 859 aa5.3□□□□□ -1.56
CCNL1-215ENST00000474539 GPR108Q9NPR9 543 aa5.3□□□□□ -1.56
CCNL1-215ENST00000474539 ADD3Q9UEY8 706 aaKnown RBP5.3□□□□□ -1.56
CCNL1-215ENST00000474539 SUGT1Q9Y2Z0 365 aa5.3□□□□□ -1.56
CCNL1-215ENST00000474539 NOC2LQ9Y3T9 749 aaKnown RBP5.3□□□□□ -1.56
CCNL1-215ENST00000474539 IQGAP3Q86VI3 1631 aa5.3□□□□□ -1.56
CCNL1-215ENST00000474539 MAP3K15Q6ZN16 1313 aa5.3□□□□□ -1.56
CCNL1-215ENST00000474539 NDC80O14777 642 aa5.29□□□□□ -1.56
CCNL1-215ENST00000474539 HOXC6P09630 235 aa5.29□□□□□ -1.56
CCNL1-215ENST00000474539 EZRP15311 586 aaKnown RBP5.29□□□□□ -1.56
CCNL1-215ENST00000474539 METAP2P50579 478 aaKnown RBP eCLIP5.29□□□□□ -1.56
CCNL1-215ENST00000474539 YWHAEP62258 255 aaKnown RBP5.29□□□□□ -1.56
CCNL1-215ENST00000474539 DDX11Q96FC9 970 aa5.29□□□□□ -1.56
CCNL1-215ENST00000474539 TANGO6Q9C0B7 1094 aa5.29□□□□□ -1.56
CCNL1-215ENST00000474539 AZI2Q9H6S1 392 aa5.29□□□□□ -1.56
CCNL1-215ENST00000474539 TULP4Q9NRJ4 1543 aa5.29□□□□□ -1.56
CCNL1-215ENST00000474539 XPOTO43592 962 aaKnown RBP5.29□□□□□ -1.56
CCNL1-215ENST00000474539 STX10O60499 249 aa5.29□□□□□ -1.56
CCNL1-215ENST00000474539 PARP1P09874 1014 aaKnown RBP5.29□□□□□ -1.56
CCNL1-215ENST00000474539 RBM25P49756 843 aaKnown RBP5.29□□□□□ -1.56
CCNL1-215ENST00000474539 MAP3K11Q16584 847 aa5.29□□□□□ -1.56
CCNL1-215ENST00000474539 CIAPIN1Q6FI81 312 aa5.29□□□□□ -1.56
CCNL1-215ENST00000474539 KRT26Q7Z3Y9 468 aa5.29□□□□□ -1.56
CCNL1-215ENST00000474539 CCDC155Q8N6L0 562 aa5.29□□□□□ -1.56
CCNL1-215ENST00000474539 RHPN1Q8TCX5 695 aa5.29□□□□□ -1.56
CCNL1-215ENST00000474539 TAOK3Q9H2K8 898 aa5.29□□□□□ -1.56
CCNL1-215ENST00000474539 ZNF335Q9H4Z2 1342 aaPredicted RBP5.29□□□□□ -1.56
CCNL1-215ENST00000474539 CARNS1A5YM72 827 aa5.29□□□□□ -1.56
CCNL1-215ENST00000474539 UBA7P41226 1012 aa5.29□□□□□ -1.56
CCNL1-215ENST00000474539 ME1P48163 572 aa5.29□□□□□ -1.56
CCNL1-215ENST00000474539 HDAC1Q13547 482 aaPredicted RBP5.29□□□□□ -1.56
CCNL1-215ENST00000474539 GALNT17Q6IS24 598 aa5.29□□□□□ -1.56
CCNL1-215ENST00000474539 CCDC83Q8IWF9 413 aa5.29□□□□□ -1.56
CCNL1-215ENST00000474539 TMEM57Q8N5G2 664 aa5.29□□□□□ -1.56
CCNL1-215ENST00000474539 ANKRD44Q8N8A2 993 aa5.29□□□□□ -1.56
CCNL1-215ENST00000474539 SSH1Q8WYL5 1049 aa5.29□□□□□ -1.56
CCNL1-215ENST00000474539 FBXO40Q9UH90 709 aa5.29□□□□□ -1.56
CCNL1-215ENST00000474539 SSX2IPQ9Y2D8 614 aa5.29□□□□□ -1.56
CCNL1-215ENST00000474539 MRPL11Q9Y3B7 192 aaKnown RBP5.29□□□□□ -1.56
CCNL1-215ENST00000474539 SAMM50Q9Y512 469 aa5.29□□□□□ -1.56
CCNL1-215ENST00000474539 PRDM15P57071 1507 aaPredicted RBP5.29□□□□□ -1.56
CCNL1-215ENST00000474539 KIF2AO00139 706 aaPredicted RBP5.29□□□□□ -1.56
CCNL1-215ENST00000474539 ZBTB43O43298 467 aa5.29□□□□□ -1.56
CCNL1-215ENST00000474539 BCAR3O75815 825 aa5.29□□□□□ -1.56
CCNL1-215ENST00000474539 SMTNP53814 917 aa5.29□□□□□ -1.56
CCNL1-215ENST00000474539 RTN1Q16799 776 aa5.29□□□□□ -1.56
CCNL1-215ENST00000474539 EAPPQ56P03 285 aaPredicted RBP5.29□□□□□ -1.56
CCNL1-215ENST00000474539 ZBTB38Q8NAP3 1195 aaPredicted RBP5.29□□□□□ -1.56
CCNL1-215ENST00000474539 TAF4BQ92750 862 aa5.29□□□□□ -1.56
CCNL1-215ENST00000474539 PPP2R3CQ969Q6 453 aa5.29□□□□□ -1.56
CCNL1-215ENST00000474539 VPS33BQ9H267 617 aa5.29□□□□□ -1.56
CCNL1-215ENST00000474539 PAG1Q9NWQ8 432 aa5.29□□□□□ -1.56
CCNL1-215ENST00000474539 RPLP2P05387 115 aaKnown RBP5.28□□□□□ -1.56
CCNL1-215ENST00000474539 IL13P35225 146 aa5.28□□□□□ -1.56
CCNL1-215ENST00000474539 AMER1Q5JTC6 1135 aaPredicted RBP5.28□□□□□ -1.56
CCNL1-215ENST00000474539 PNMA8AQ86V59 439 aaPredicted RBP5.28□□□□□ -1.56
CCNL1-215ENST00000474539 IFT74Q96LB3 600 aa5.28□□□□□ -1.56
CCNL1-215ENST00000474539 COA1Q9GZY4 146 aa5.28□□□□□ -1.56
CCNL1-215ENST00000474539 BOLA2Q9H3K6 86 aa5.28□□□□□ -1.56
CCNL1-215ENST00000474539 HOMER2Q9NSB8 354 aa5.28□□□□□ -1.56
CCNL1-215ENST00000474539 CEP83Q9Y592 693 aa5.28□□□□□ -1.56
CCNL1-215ENST00000474539 CIAO1O76071 339 aa5.28□□□□□ -1.56
CCNL1-215ENST00000474539 CWC27Q6UX04 472 aaKnown RBP5.28□□□□□ -1.56
CCNL1-215ENST00000474539 NEK1Q96PY6 1258 aa5.28□□□□□ -1.56
CCNL1-215ENST00000474539 MIS12Q9H081 205 aa5.28□□□□□ -1.56
CCNL1-215ENST00000474539 LIMCH1Q9UPQ0 1083 aa5.28□□□□□ -1.56
CCNL1-215ENST00000474539 USP31Q70CQ4 1352 aa5.28□□□□□ -1.56
CCNL1-215ENST00000474539 K7ELQ4 463 aaPredicted RBP5.28□□□□□ -1.56
CCNL1-215ENST00000474539 NOP56O00567 594 aaKnown RBP5.28□□□□□ -1.56
CCNL1-215ENST00000474539 SERPINB2P05120 415 aa5.28□□□□□ -1.56
CCNL1-215ENST00000474539 MCM3P25205 808 aa5.28□□□□□ -1.56
CCNL1-215ENST00000474539 KRT79Q5XKE5 535 aa5.28□□□□□ -1.56
CCNL1-215ENST00000474539 FILIP1Q7Z7B0 1213 aa5.28□□□□□ -1.56
CCNL1-215ENST00000474539 SYCP3Q8IZU3 236 aa5.28□□□□□ -1.56
CCNL1-215ENST00000474539 TBC1D5Q92609 795 aa5.28□□□□□ -1.56
CCNL1-215ENST00000474539 BICD1Q96G01 975 aa5.28□□□□□ -1.56
CCNL1-215ENST00000474539 MCM9Q9NXL9 1143 aa5.28□□□□□ -1.56
CCNL1-215ENST00000474539 USP25Q9UHP3 1055 aa5.28□□□□□ -1.56
CCNL1-215ENST00000474539 STX8Q9UNK0 236 aa5.28□□□□□ -1.56
CCNL1-215ENST00000474539 CARMIL3Q8ND23 1372 aa5.28□□□□□ -1.56
CCNL1-215ENST00000474539 EIF3DO15371 548 aaKnown RBP eCLIP5.28□□□□□ -1.56
CCNL1-215ENST00000474539 FOSP01100 380 aaPredicted RBP5.28□□□□□ -1.56
Retrieved 100 of 20,778 RNA–protein pairs in 49 ms